Index of /ln2downloads/lit_min/docker/old/


../
protolib/                                          17-Feb-2022 19:48                   -
utils/                                             17-Feb-2022 19:48                   -
1_queryPubmed.py                                   17-Feb-2022 19:47                3171
GDS_Detection.csv                                  17-May-2023 03:47              574178
add_oger_entity.py                                 17-Feb-2022 19:47                3022
add_oger_entity.pyc                                17-Feb-2022 19:48                2113
add_protein_ancronym.py                            17-Feb-2022 19:47                6144
add_protein_ancronym.pyc                           17-Feb-2022 19:48                5545
add_sugar_protein_site_class.py                    17-Feb-2022 19:47              129427
add_sugar_protein_site_class.pyc                   17-Feb-2022 19:47               63003
aminoAcidSiteDetectionTool_v4.py                   17-Feb-2022 19:47               45385
aminoAcidSiteDetectionTool_v4.pyc                  17-Feb-2022 19:48               20576
boot.sh                                            17-Feb-2022 19:47                  30
complex_dic.json                                   17-Feb-2022 19:47              252440
convert_uniprot_site.py                            17-Feb-2022 19:47               12392
convert_uniprot_site.pyc                           17-Feb-2022 19:48                7480
create_entityTable_forDB.py                        17-Feb-2022 19:47                2481
create_entityTable_forDB.pyc                       17-Feb-2022 19:47                2464
create_textTable_forDB.py                          17-Feb-2022 19:47                2363
create_textTable_forDB.pyc                         17-Feb-2022 19:47                2386
detect_polysachharide.py                           17-Feb-2022 19:47                9004
detect_polysachharide.pyc                          17-Feb-2022 19:47                5827
dictionaries - sugars.tsv                          17-Feb-2022 19:47                7946
edg_all_rules_101820.txt                           17-Feb-2022 19:47               80406
entrez_reviewed_ac_mapping_new.txt                 17-Feb-2022 19:47             4273341
f_terms_EDG.py                                     17-Feb-2022 19:47               84711
f_terms_EDG.pyc                                    17-Feb-2022 19:48               29585
file_process.py                                    17-Feb-2022 19:47                1169
file_process.pyc                                   17-Feb-2022 19:48                1397
generate_aminoAcidSiteEntities.py                  17-Feb-2022 19:47                3786
generate_aminoAcidSiteEntities.pyc                 17-Feb-2022 19:48                3402
generate_sugar_protein_site.py                     17-Feb-2022 19:47                9260
generate_sugar_protein_site.pyc                    17-Feb-2022 19:48                7051
glygen.py                                          17-Feb-2022 19:47               10817
glygen_init.tsv                                    17-Feb-2022 19:47                 200
glygen_init_cterm_before_merge_tmp.tsv             17-Feb-2022 19:47                 176
glygen_init_cterm_tmp.tsv                          17-Feb-2022 19:47                 176
glygen_init_filtered_out_before_merge_tmp.tsv      17-Feb-2022 19:47                 176
glygen_init_filtered_out_tmp.tsv                   17-Feb-2022 19:47                 176
glygen_init_final_tmp.tsv                          17-Feb-2022 19:47                  57
glygen_init_new_tmp.tsv                            17-Feb-2022 19:47                 241
glygen_init_other_tmp.tsv                          17-Feb-2022 19:47                 176
glygen_init_postprocessing_before_merge_tmp.tsv    17-Feb-2022 19:47                 176
glygen_init_postprocessing_site_fusion_tmp.tsv     17-Feb-2022 19:47                 176
glygen_init_postprocessing_tmp.tsv                 17-Feb-2022 19:47                 176
glygen_init_site_fusion_final_tmp.tsv              17-Feb-2022 19:47                  57
glygen_init_site_fusion_output_contain_empty_si..> 17-Feb-2022 19:47                  52
glygen_init_site_fusion_output_tmp.tsv             17-Feb-2022 19:47                  52
glygen_large.txt                                   17-Feb-2022 19:47               93336
glygen_large_cterm.tsv                             17-Feb-2022 19:47             2575915
glygen_large_postprocessing.tsv                    17-Feb-2022 19:47            16483474
glygen_large_postprocessing_site_fusion.tsv        17-Feb-2022 19:47            11156678
glygen_large_site_fusion_output.tsv                17-Feb-2022 19:47               76690
glygen_pmc_cterm.tsv                               17-Feb-2022 19:47               37734
glygen_pmc_postprocessing.tsv                      17-Feb-2022 19:47              501806
glygen_pmc_postprocessing_site_fusion.tsv          17-Feb-2022 19:47              405826
glygen_pmc_site_fusion_output.tsv                  17-Feb-2022 19:47                1570
glygen_set.txt                                     17-Feb-2022 19:47               12615
glygen_set_abstract_np.json                        23-Mar-2022 16:50            76734490
glygen_set_all.tsv                                 22-Feb-2022 18:02           350530465
glygen_set_cterm.tsv                               17-Feb-2022 19:47              571688
glygen_set_new.txt                                 17-Feb-2022 19:47                  37
glygen_set_new2.txt                                17-Feb-2022 19:47                  54
glygen_set_new_cterm.tsv                           17-Feb-2022 19:47                 175
glygen_set_new_postprocessing.tsv                  17-Feb-2022 19:47                 175
glygen_set_new_postprocessing_site_fusion.tsv      17-Feb-2022 19:47                 175
glygen_set_new_site_fusion_output.tsv              17-Feb-2022 19:47                  51
glygen_set_oger_entity.json                        17-Feb-2022 19:47             2478110
glygen_set_oger_entity_complex.json                17-Feb-2022 19:47              388085
glygen_set_oger_entity_cp.json                     17-Feb-2022 19:47              518133
glygen_set_postprocessing.tsv                      17-Feb-2022 19:47             2671277
glygen_set_postprocessing_site_fusion.tsv          17-Feb-2022 19:47             1849266
glygen_set_site_fusion_output.tsv                  17-Feb-2022 19:47               25673
glygen_set_test.txt                                17-Feb-2022 19:47                  44
glygen_set_toy.tsv                                 17-Feb-2022 19:47                 200
glygen_set_toy.txt                                 17-Feb-2022 19:47                  27
glygen_set_toy_cterm_before_merge_tmp.tsv          17-Feb-2022 19:47                 176
glygen_set_toy_cterm_tmp.tsv                       17-Feb-2022 19:47                 176
glygen_set_toy_filtered_out_before_merge_tmp.tsv   17-Feb-2022 19:47                 176
glygen_set_toy_filtered_out_tmp.tsv                17-Feb-2022 19:47                 176
glygen_set_toy_final_tmp.tsv                       17-Feb-2022 19:47                  57
glygen_set_toy_new_tmp.tsv                         17-Feb-2022 19:47                 241
glygen_set_toy_other_tmp.tsv                       17-Feb-2022 19:47                 176
glygen_set_toy_postprocessing_before_merge_tmp.tsv 17-Feb-2022 19:47                 176
glygen_set_toy_postprocessing_site_fusion_tmp.tsv  17-Feb-2022 19:47                 176
glygen_set_toy_postprocessing_tmp.tsv              17-Feb-2022 19:47                 176
glygen_set_toy_site_fusion_final_tmp.tsv           17-Feb-2022 19:47                  57
glygen_set_toy_site_fusion_output_contain_empty..> 17-Feb-2022 19:47                  52
glygen_set_toy_site_fusion_output_tmp.tsv          17-Feb-2022 19:47                  52
glygen_test.txt                                    17-Feb-2022 19:47                  90
monosaccharide_short_name.txt                      17-Feb-2022 19:47               37772
motif.txt                                          17-Feb-2022 19:47                4939
mpsDetector.py                                     17-Feb-2022 19:47                3726
np_generator.py                                    17-Feb-2022 19:47                9734
np_generator.pyc                                   17-Feb-2022 19:48                7281
oger_entity_complex_tmp.json                       17-Feb-2022 19:47                 222
oger_entity_cp_tmp.json                            17-Feb-2022 19:47                  48
oger_entity_tmp.json                               17-Feb-2022 19:47                 911
pmid_batch_1.tsv                                   17-May-2023 03:47              113184
pmid_batch_1.txt                                   17-Feb-2022 19:36                  27
pmid_batch_1_cterm_before_merge_tmp.tsv            17-May-2023 03:49                1455
pmid_batch_1_cterm_tmp.tsv                         17-May-2023 03:49                1455
pmid_batch_1_filtered_out_before_merge_tmp.tsv     17-May-2023 03:49                3473
pmid_batch_1_filtered_out_tmp.tsv                  17-May-2023 03:49                3248
pmid_batch_1_final_tmp.tsv                         17-May-2023 03:49                 593
pmid_batch_1_new_tmp.tsv                           17-May-2023 03:49              114865
pmid_batch_1_other_tmp.tsv                         17-May-2023 03:49                3079
pmid_batch_1_postprocessing_before_merge_tmp.tsv   17-May-2023 03:49                4358
pmid_batch_1_postprocessing_site_fusion_tmp.tsv    17-May-2023 03:49                3753
pmid_batch_1_postprocessing_tmp.tsv                17-May-2023 03:49                4358
pmid_batch_1_site_fusion_final_tmp.tsv             17-May-2023 03:49                 593
pmid_batch_1_site_fusion_output_contain_empty_s..> 17-May-2023 03:49                 155
pmid_batch_1_site_fusion_output_tmp.tsv            17-May-2023 03:49                  52
pmid_batch_2.tsv                                   22-Feb-2022 18:03            75626282
pmid_batch_2.txt                                   22-Feb-2022 17:59               35818
pmid_batch_2_cterm_before_merge_tmp.tsv            23-Feb-2022 02:45              579510
pmid_batch_2_cterm_tmp.tsv                         23-Feb-2022 02:45              569352
pmid_batch_2_filtered_out_before_merge_tmp.tsv     23-Feb-2022 02:45             2268101
pmid_batch_2_filtered_out_tmp.tsv                  23-Feb-2022 02:45             2851814
pmid_batch_2_final_tmp.tsv                         23-Feb-2022 02:45              441204
pmid_batch_2_new_tmp.tsv                           23-Feb-2022 02:32            76745853
pmid_batch_2_other_tmp.tsv                         23-Feb-2022 02:45             3942399
pmid_batch_2_postprocessing_before_merge_tmp.tsv   23-Feb-2022 02:45             4581353
pmid_batch_2_postprocessing_site_fusion_tmp.tsv    23-Feb-2022 05:42             3296297
pmid_batch_2_postprocessing_tmp.tsv                23-Feb-2022 02:45             4434164
pmid_batch_2_site_fusion_final_tmp.tsv             23-Feb-2022 05:42              459797
pmid_batch_2_site_fusion_output_contain_empty_s..> 23-Feb-2022 05:42               82646
pmid_batch_2_site_fusion_output_tmp.tsv            23-Feb-2022 05:42               25222
pmid_batch_3.tsv                                   23-Mar-2022 16:49                 200
pmid_batch_3.txt                                   03-Mar-2022 18:02                  42
pmid_batch_3_cterm_before_merge_tmp.tsv            23-Mar-2022 16:51                 176
pmid_batch_3_cterm_tmp.tsv                         23-Mar-2022 16:51                 176
pmid_batch_3_filtered_out_before_merge_tmp.tsv     23-Mar-2022 16:51                 176
pmid_batch_3_filtered_out_tmp.tsv                  23-Mar-2022 16:51                 176
pmid_batch_3_final_tmp.tsv                         23-Mar-2022 16:51                  57
pmid_batch_3_new_tmp.tsv                           23-Mar-2022 16:51                 241
pmid_batch_3_other_tmp.tsv                         23-Mar-2022 16:51                 176
pmid_batch_3_postprocessing_before_merge_tmp.tsv   23-Mar-2022 16:51                 176
pmid_batch_3_postprocessing_site_fusion_tmp.tsv    23-Mar-2022 16:52                 176
pmid_batch_3_postprocessing_tmp.tsv                23-Mar-2022 16:51                 176
pmid_batch_3_site_fusion_final_tmp.tsv             23-Mar-2022 16:52                  57
pmid_batch_3_site_fusion_output_contain_empty_s..> 23-Mar-2022 16:52                  52
pmid_batch_3_site_fusion_output_tmp.tsv            23-Mar-2022 16:52                  52
pmid_multiple_protein_in_title_unresolved.csv      17-May-2023 03:49                  15
process_edg_relations_pmids.py                     17-Feb-2022 19:47                8813
process_edg_relations_pmids.pyc                    17-Feb-2022 19:48                7848
remove_sites_afterFurtherAnalysis_fromGlygenDB.py  17-Feb-2022 19:47               10484
remove_sites_afterFurtherAnalysis_fromGlygenDB.pyc 17-Feb-2022 19:48                7060
requirements.txt                                   17-Feb-2022 19:47                 563
site_substrate_fusion.py                           17-Feb-2022 19:47               28346
site_substrate_fusion.pyc                          17-Feb-2022 19:48               15379
tst                                                18-Feb-2022 16:46                   0
uniprot_kb_ac_to_id.json                           17-Feb-2022 19:47            13569724
uniprot_kb_id_to_ac.json                           17-Feb-2022 19:47            13569724
update_entity_in_database.py                       17-Feb-2022 19:47               27337
update_entity_in_database.pyc                      17-Feb-2022 19:47               10929