==== Front Sci Data Sci Data Scientific Data 2052-4463 Nature Publishing Group UK London 37393372 2274 10.1038/s41597-023-02274-0 Data Descriptor GNSS land subsidence observations along the northern coastline of Java, Indonesia http://orcid.org/0000-0003-4982-7060 Susilo Susilo susilo.2@brin.go.id 1 http://orcid.org/0000-0001-6999-8516 Salman Rino rino@ntu.edu.sg 2 Hermawan Wawan 3 Widyaningrum Risna 3 Wibowo Sidik Tri 4 http://orcid.org/0000-0002-3475-9192 Lumban-Gaol Yustisi Ardhitasari 1 http://orcid.org/0000-0003-3488-9154 Meilano Irwan 5 http://orcid.org/0000-0001-6952-6156 Yun Sang-Ho 267 1 National Agency for Research and Innovation (BRIN), Jakarta, Indonesia 2 grid.59025.3b 0000 0001 2224 0361 Earth Observatory of Singapore, Nanyang Technological University, Singapore, Singapore 3 Center for Groundwater and Environmental Geology, Geological Agency, Bandung, Indonesia 4 Geospatial Information Agency (BIG), Cibinong, Indonesia 5 grid.434933.a 0000 0004 1808 0563 Faculty of Earth Sciences and Technology, Institute of Technology Bandung (ITB), Bandung, Indonesia 6 grid.59025.3b 0000 0001 2224 0361 Asian School of the Environment, Nanyang Technological University, Singapore, Singapore 7 grid.59025.3b 0000 0001 2224 0361 School of Electrical and Electronic Engineering, Nanyang Technological University, Singapore, Singapore 1 7 2023 1 7 2023 2023 10 42127 1 2023 30 5 2023 © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/ Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. Land subsidence in cities along the northern coastline of Java has been at a worrying level. Monitoring efforts using geodetic data reveal that Jakarta, Pekalongan, Semarang, and Demak subside at least ~9x faster than the present-day rate of global sea level rise, which affects the cities’ future urban viability. In this study, we publish a time series of the precise 3D displacements observed by twenty continuous Global Navigation Satellite System (GNSS) stations between 2010 and 2021. These are the first open-to-the-public and rigorously processed GNSS datasets that are useful for accurately quantifying land subsidence in the densely populated sinking cities in Java. The data also provides a way to tie other geodetic observations, such as Interferometric Synthetic Aperture Radar (InSAR), to a global reference frame in an attempt to build worldwide observations of coastal land subsidence. Subject terms Natural hazards Solid Earth sciences The Disaster Seed Research Grant Program of the National Research and Innovation Agency of the Republic of Indonesia DIPA-124.01.1.690501/2023.The National Research Foundation Singapore and the Singapore Ministry of Education under the Research Centres of Excellence Initiative, the Ministry of Education Singapore under its Academic Research Fund Tier 3 MOE-MOET32021-0002 Award, and National Environment Agency Singapore under the National Sea Level Programme Funding Initiative (Award No. USS-IF-2020-5).The RISPRO LPDP Indonesia Endowment Fund for Education S-303/LPDP.4/2022.issue-copyright-statement© Springer Nature Limited 2023 ==== Body pmcBackground & Summary The northern coastline regions of Java have been soliciting the attention of many studies because a large portion of land in at least ten cities is subsiding1–18 (Fig. 1). The subsiding land has been triggered by a wide range of natural and anthropogenic activities, such as the compaction of sediments in Pekalongan, Semarang, and Demak19,20, gas extraction in Sidoarjo16, and structural loadings in Jakarta1. In addition, excessive groundwater extraction is the most significant triggering factor due to the increasing demand and need for residential and industrial water supply2,16,21–24. In these cities, the impacts of land subsidence such as widespread coastal inundation and structural damage to buildings, have been significantly reducing the quality of the living environment1,2,5,14,17,20,25–27. In Jakarta, the capital city of Indonesia, land subsidence is so severely affecting the city’s future urban viability28 that government authorities are planning to move the capital to Borneo29.Fig. 1 Administrative boundaries of coastal cities along the northern coastline regions of Java that are known to experience land subsidence1–18. Monitoring efforts to study the spatial extent of land subsidence and its rates in these cities have been continuously made using land-based and space-borne techniques1–4,6–11,15,16,27,30. Out of the ten cities, land subsidence in Jakarta and Semarang has been the most intensively studied with a long monitoring history. In Jakarta, levelling surveys and campaign GNSS measurements between 1982 and 2010 estimate that the rates are from 1 to 28 cm/year1. A recent study using Sentinel-1 InSAR data between 2014 and 2020 estimates that the rates are from 1 to ~11 cm/year7,8. Different rates between the past and recent monitoring efforts have also been observed in Semarang: GNSS measurements between 1999 and 2011 estimate that the rates are from 14 to 19 cm/year2, while a recent study using Sentinel-1 InSAR data between 2015 and 2020 reveals that the rates are from 2 to 3 cm/year8. Besides Jakarta and Semarang, land subsidence monitoring efforts using InSAR data in the remaining cities have been rapidly growing since 20133,4,6,9,11,16,31–33 thanks to the availability of open access SAR data from the Copernicus Sentinel-1 satellites operated by the European Space Agency. On the contrary, since 2013, the monitoring efforts using campaign GNSS measurements have been lacking; the latest measurements were in 2010 for Jakarta1, in 2017 for Semarang12, and in 2018 for Demak10. Even worse, no study reported GNSS-based monitoring efforts in other cities that are known to experience land subsidence, such as Bekasi, Subang, Pekalongan, and Surabaya. This lack of GNSS-based monitoring efforts is worrying because the GNSS data is still needed for several reasons. First, although InSAR observations provide all-weather and day-night monitoring capacity at high spatial coverage and resolution34,35, InSAR accuracy may still be degraded by various noise sources such as atmospheric phase delays, satellite orbit uncertainty, and unwrapping errors36,37. The degraded accuracy may mislead the interpretation of the subsidence rate. Incorporating independent data from GNSS measurements can help mitigate the false interpretation38,39. Second, InSAR velocity maps are relative to a reference point within the SAR data footprints. In areas where GNSS data is not available, a common approach to select a reference point is by assuming a certain area to be stable. However, this approach is subjective and may result in varying InSAR velocity maps across different studies. For example, Tay et al.7 showed that a location on the northern coastline of Jakarta subsides ~7x faster than that reported by Wu et al.8. One possible explanation for this discrepancy is the use of different reference points. Therefore, GNSS data is necessary to provide a priori information for selecting a stable reference point. Third, InSAR velocity maps are 1D measurements of surface deformations in the radar line-of-sight direction of SAR satellites34,35. In the case of land subsidence monitoring where vertical motions are of interest, other data sets such as GNSS observations are needed to isolate the vertical motions precisely (e.g.40–43). Fourth, Shirzaei et al.44 suggest the need for incorporating geocentric global reference frame vertical land motion (VLM) into global mean sea level (GMSL) studies. Geocentric is the natural for a global frame. Therefore, GMSL studies relative to this frame will allow us to determine whether a given location is rising or falling relative to the centre of the Earth. The InSAR-based VLM measurements are ideal for this purpose because InSAR data provide global coverage observations. However, the main challenge is that InSAR results are provided in a local reference frame. Thus, establishing worldwide InSAR-based VLM measurements needs GNSS data to tie the VLM measurements into a global reference frame44. In this study, we publish a time series of 3D displacements observed at twenty continuous GNSS stations between 2010 and 2021 along the northern coastline regions of Java (Fig. 1). The data may potentially be used for all the purposes mentioned above. Observation specifications We obtain the Receiver Independent Exchange (RINEX) GNSS data from the Geospatial Information Agency of Indonesia (BIG) which has been establishing and maintaining continuous GNSS stations in the country since 1996. Most stations are located on the national telecommunication company network. The stations use different monument types (Fig. 2) and record data continuously at one sample per second using high-precision L1/L2 geodetic type receivers and standard Choke Ring antennas (Table 1). In addition, the stations also have meteorological instrument systems, an automatic battery charger that connects to the national power network, and a cell modem (Fig. 3) that will stream the recorded raw data via a secure TCP/IP connection to BIG’s data processing centre in Cibinong, West Java up to one-hour latency.Fig. 2 Monument types of the BIG GNSS stations used in this study. Table 1 GNSS station specifications. Site Monument type Receiver type Antenna type Data transmission First observation CPSR BRACE TRIMBLE ALLOY LEIAT504 VPN 2010 CGON SCC TRIMBLE ALLOY LEIAR20 VPN 2010 CTGR SCC TRIMBLE ALLOY LEIAR25 VPN 2009 CJKT SCC TRIMBLE ALLOY LEIAR20 VPN 2010 CBTU SCC LEICA GR10 LEIAR25 VPN 2010 CROL CC TRIMBLE ALLOY LEIAR25 VPN 2010 CCIR SCC LEICA GR50 TPSCR.G3 VPN 2010 CTGL SCC LEICA GR50 LEIAR25 VPN 2010 CSEM SCC LEICA GR50 TPSCR.G3 VPN 2010 CJPR CC TRIMBLE ALLOY HX-C6X601A VPN 2010 CPKL CC LEICA GR50 LEIAR25 VPN 2010 CPWD SCC LEICA GR50 LEIAR20 VPN 2010 CTBN CC TPS NET-G3A TPSCR.G3 VPN 2010 CLMG SCC LEICA GR50 TPSCR.G3 VPN 2010 CMJT SCC LEICA GR50 TPSCR.G3 VPN 2010 CSBY SCC LEICA GR50 TPSCR.G3 VPN 2010 CPAS SCC TPS NET-G3A TPSCR.G3 VPN 2010 CPAI SCC TPS NET-G3A TPSCR.G3 VPN 2010 CSIT SCC TPS NET-G3A TPSCR.G3 VPN 2010 CBRN BRACE TRIMBLE ALLOY LEIAT504 Offline 2008 CC: Cast Concrete; SCC: Short Cast Concrete. Fig. 3 Components of the BIG GNSS stations. Methods We processed the RINEX GNSS data and obtained a time series of GNSS station coordinates using the GPS at MIT/Global Kalman filtering (GAMIT/GLOBK) software package version 10.7145–47. Our GPS processing consisted of two steps48,49. In the first step, we used double-differencing methods in the GAMIT software to estimate daily station positions, atmospheric parameters, satellite orbits, and earth orientation parameters from ionosphere-free linear combination GPS phase observations. During this step, we fixed the satellite orbit parameters to the IGS final orbits and applied a second-order ionospheric correction using IGS final ionospheric products. We set the computation parameters to the default GAMIT setting, except for the atmospheric delay parameters, which were modeled and estimated every hour using the Vienna Mapping Function50. We corrected the station displacements due to ocean tides using the most recent global ocean tide model, Finite Element Solution 200451. To adjust the effect of solar and solid-earth tides, we applied the International Earth Rotation and Reference System Service 2010 standard model52 and the atmospheric pressure loading model corrections53. Finally, we included GPS data from 12 International GNSS Services (IGS) stations (ALIC, BAKO, COCO, DARW, DGAR, GUAM, HYDE, IISC, LHAZ, PIMO, XMIS, YARR) in our daily processing to integrate our local network into the ITRF2014 reference frame54. In the second step, we used the GLOBK software to combine our daily solutions with the global GPS solutions provided by the MIT analysis centre. During this step, we aligned our combined solutions with the ITRF2014 reference frame54 by minimising the position differences of eight selected sites55, using a priori values defined by the IGb14 realisation of ITRF201454. To accomplish this position difference minimation, we calculated six Helmert transformation parameters (three translations and three rotations) of eight selected reference sites: YARR in Australia, MAW1 and DAV1 in Antarctica, STJO and FLIN in North America, WSRT, ONSA, and NOT1 in Europe55. These sites were selected because they are less affected by earthquake deformations and hydrological loading55. Lastly, we generated daily time series coordinates for all the GNSS stations with respect to IGb14 realisation of ITRF201454. Data Records The processing results are a time series of 3D displacements from 2010 to 2021, relative to the ITRF2014. Most stations record negative velocities in the vertical component and are likely related to land subsidence (Table 2 and Fig. 4). The time series of the 3D displacements that include horizontal motions can be found in this repository: 10.5281/zenodo.777501656.Table 2 Vertical velocity recorded by the BIG GNSS stations along the northern coastline regions of Java. Site Longitude (degree) Latitude (degree) Vertical velocity (mm/year) Uncertainty (mm/year) CPSR 105.834 −6.226 −1.0 0.052 CGON 106.052 −6.021 0.0 0.043 CTGR 106.664 −6.291 −2.9 0.049 CJKT 106.885 −6.110 −6.4 0.043 CBTU 107.096 −6.308 −0.5 0.044 CROL 107.985 −6.313 −15.9 0.045 CCIR 108.561 −6.716 −2.3 0.041 CTGL 109.136 −6.871 −12.5 0.043 CSEM 110.377 −6.987 −0.8 0.038 CJPR 110.667 −6.596 −2.7 0.056 CPKL 109.669 −6.887 −107.0 0.202 CPWD 110.914 −7.096 −1.1 0.044 CTBN 111.986 −6.872 0.4 0.042 CLMG 112.327 −7.093 −4.9 0.041 CMJT 112.442 −7.466 −1.3 0.042 CSBY 112.724 −7.334 −2.2 0.039 CPAS 112.901 −7.651 −1.4 0.033 CPAI 113.530 −7.719 −3.5 0.039 CSIT 114.013 −7.703 0.1 0.041 CBRN 114.440 −7.838 −2.1 0.082 Fig. 4 Vertical component of the twenty BIG GNSS stations. (a) Negative vertical velocities are likely related to land subsidence. (b) Daily time series of the GNSS vertical component from 2010 to 2021. Technical Validation Bad environments (e.g., buildings and trees) that degrade the sky view of the GNSS antenna will reflect and refract satellite signals before arriving at the antenna57. The reflected and refracted signals are called multipath signals which will introduce carrier phase measurement errors and subsequently lead to a positioning error58. A simple approach to inspect the environments surrounding the antenna is by plotting the signal-to-noise ratio (SNR) values measured by the GNSS receivers59. The SNR, like the carrier phase measurement, is also impacted directly by multipath signals and hence can therefore be used as a proxy to assess the environments surrounding the GNSS antenna59,60. Low SNR values indicate a large tracking error59, meaning that multipath objects are present. We plot the SNR values using the L1 data recordings only. We do not use the L2 data due to its encrypted C/A code and the lack of civilian access to the P-code which affects the L2 SNR reliability59. We plot the SNR values as a function of azimuth and elevation angle, both in the time series and sky plot (Figure S1). The SNR plot shows that all the stations have SNR values greater than 30 decibels, indicating good environments surrounding the GNSS stations hence the negative velocities in the vertical component are robust. In addition to SNR analysis, we use independent observation measured by a deep pile benchmark to validate the negative velocity at the GNSS CPKL station in Pekalongan (Table 2 and Fig. 4). The benchmark (Fig. 5) was installed by the centre for groundwater and environmental geology, Indonesia’s geological agency, on 17 March 2020 ~500 m northeast of the GNSS CPKL station. The benchmark measurements between 06 April 2021 and 02 October 2022 estimate that ~80 ± 1 mm land subsidence occurs within ~1.5 years (Fig. 5c,d). Unfortunately, we cannot make a one-to-one comparison between this result and the amplitude of land subsidence measured at the GNSS CPKL station due to two reasons: 1) the benchmark and the GNSS CPKL station are ~500 m apart, 2) our GNSS data ended in 2021. Nevertheless, the benchmark measurements are still important in the sense that Pekalongan city is experiencing severe land subsidence.Fig. 5 A deep pile benchmark to measure land subsidence in Pekalongan. (a) A schematic design of the deep pile benchmark. (b) The newly installed benchmark. (c) The benchmark measures 60 ± 1 mm land subsidence by 06 April 2021. (d) The benchmark measures 140 ± 1 mm land subsidence by 02 October 2022, meaning that 80 ± 1 mm land subsidence occurs within ~1.5 years. Supplementary information GNSS land subsidence observations along the northern coastline of Java, Indonesia Supplementary information The online version contains supplementary material available at 10.1038/s41597-023-02274-0. Acknowledgements We thank BIG for providing the RINEX GNSS data. Part of this research is supported by the Earth Observatory of Singapore (EOS) via its funding from the National Research Foundation Singapore and the Singapore Ministry of Education under the Research Centres of Excellence Initiative, the Ministry of Education Singapore under its Academic Research Fund Tier 3 MOE-MOET32021-0002 Award, and National Environment Agency Singapore under the National Sea Level Programme Funding Initiative (Award No. USS-IF-2020-5). I.M. is supported by RISPRO LPDP Indonesia Endowment Fund for Education S-303/LPDP.4/2022. S.S. and Y.A.L.G. are supported by the Disaster Seed Research Grant Program of the National Research and Innovation Agency of the Republic of Indonesia DIPA-124.01.1.690501/2023. This work comprises EOS contribution number 517. Author contributions S.S. and R.S. are the main contributor in conceptualisation, writing, formal analysis, and visualisation. 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