PMID- 10502508
OWN - NLM
STAT- MEDLINE
DCOM- 19991021
LR  - 20191210
IS  - 0042-6822 (Print)
IS  - 0042-6822 (Linking)
VI  - 262
IP  - 2
DP  - 1999 Sep 30
TI  - Sequence analysis of the Xestia c-nigrum granulovirus genome.
PG  - 277-97
AB  - The nucleotide sequence of the Xestia c-nigrum granulovirus (XcGV) genome was
      determined and found to comprise 178,733 bases with a G+C content of 40.7%. It
      contained 181 putative genes of 150 nucleotides or greater that showed minimal
      overlap. Eighty-four of these putative genes, which collectively accounted for
      43% of the genome, are homologs of genes previously identified in the Autographa 
      californica multinucleocapsid nucleopolyhedrovirus (AcMNPV) genome. These
      homologs showed on average 33% amino acid sequence identity to those from AcMNPV.
      Several genes reported to have major roles in AcMNPV biology including ie-2,
      gp64, and egt were not found in the XcGV genome. However, open reading frames
      with homology to DNA ligase, two DNA helicases (one similar to a yeast
      mitochondrial helicase and the other to a putative AcMNPV helicase), and four
      enhancins (virus enhancing factors) were found. In addition, several ORFs are
      repeated; there are 7 genes related to AcMNPV orf2, 4 genes related to AcMNPV
      orf145/150, and a number of repeated genes unique to XcGV. Eight major repeated
      sequences (XcGV hrs) that are similar to sequences found in the Trichoplusia ni
      GV genome (TnGV) were found.
CI  - Copyright 1999 Academic Press.
FAU - Hayakawa, T
AU  - Hayakawa T
AD  - Department of Entomology, University of California, Davis, One Shields Avenue,
      Davis, California, 95616, USA.
FAU - Ko, R
AU  - Ko R
FAU - Okano, K
AU  - Okano K
FAU - Seong, S I
AU  - Seong SI
FAU - Goto, C
AU  - Goto C
FAU - Maeda, S
AU  - Maeda S
LA  - eng
SI  - GENBANK/AF162221
PT  - Comparative Study
PT  - Journal Article
PT  - Research Support, Non-U.S. Gov't
PT  - Research Support, U.S. Gov't, Non-P.H.S.
PL  - United States
TA  - Virology
JT  - Virology
JID - 0110674
RN  - 0 (Viral Proteins)
SB  - IM
MH  - Amino Acid Sequence
MH  - Baculoviridae/chemistry/enzymology/*genetics
MH  - Base Sequence
MH  - Genes, Duplicate/genetics
MH  - Genes, Viral/*genetics
MH  - *Genome, Viral
MH  - Molecular Sequence Data
MH  - Nucleopolyhedroviruses/chemistry/enzymology/genetics
MH  - Open Reading Frames/genetics
MH  - Promoter Regions, Genetic/genetics
MH  - Repetitive Sequences, Nucleic Acid/genetics
MH  - Sequence Alignment
MH  - Sequence Analysis, DNA
MH  - Sequence Homology, Amino Acid
MH  - Viral Proteins/chemistry/genetics
EDAT- 1999/09/30 00:00
MHDA- 1999/09/30 00:01
CRDT- 1999/09/30 00:00
PHST- 1999/09/30 00:00 [pubmed]
PHST- 1999/09/30 00:01 [medline]
PHST- 1999/09/30 00:00 [entrez]
AID - 10.1006/viro.1999.9894 [doi]
AID - S0042-6822(99)99894-X [pii]
PST - ppublish
SO  - Virology. 1999 Sep 30;262(2):277-97. doi: 10.1006/viro.1999.9894.