PMID- 10500279
OWN - NLM
STAT- MEDLINE
DCOM- 19991123
LR  - 20220420
IS  - 0168-1702 (Print)
IS  - 0168-1702 (Linking)
VI  - 64
IP  - 1
DP  - 1999 Oct
TI  - Molecular analysis of barley yellow mosaic virus isolates from China.
PG  - 13-21
AB  - The complete sequences of both RNAs of an isolate of barley yellow mosaic virus
      from Yancheng, Jiangsu province, China, were determined. The sequences resembled 
      those of an isolate from Japan (96.8% identical nucleotides for RNA1; 95.7% for
      RNA2) more closely than one from Germany (93.9 and 91.0%, respectively). The
      greatest differences between the Chinese and Japanese isolates were in the
      5'-UTRs of RNAs 1 and 2 (88.9 and 91.6% identical nucleotides, respectively) and 
      there were also some other regions of difference in P1 (RNA2) and P3, CI, NIa and
      the 5' end of the coat protein (CP) (RNA1). Molecular differences between
      isolates from ten sites widely distributed in Eastern China were studied by
      sequencing RNA regions coding for the CP (RNA1) and the N-terminus of the P2
      protein (RNA2). The P2 fragment was more variable than the CP, and phylogenetic
      analysis of both regions showed that Asian and European isolates formed distinct 
      clusters. Differences between isolates were also revealed by single-strand
      conformation polymorphism of reverse transcription-polymerase chain reaction
      products, spanning the full lengths of both RNA1 and RNA2. However, molecular
      variations between isolates could not be linked to earlier results showing
      differences in cultivar response.
FAU - Chen, J
AU  - Chen J
AD  - Virology Laboratory, Zhejiang Academy of Agricultural Sciences, Hangzhou,
      People's Republic of China.
FAU - Shi, N
AU  - Shi N
FAU - Cheng, Y
AU  - Cheng Y
FAU - Diao, A
AU  - Diao A
FAU - Wilson, T M
AU  - Wilson TM
FAU - Antoniw, J F
AU  - Antoniw JF
FAU - Adams, M J
AU  - Adams MJ
LA  - eng
SI  - GENBANK/AJ132268
SI  - GENBANK/AJ132269
SI  - GENBANK/AJ224619
SI  - GENBANK/AJ224620
SI  - GENBANK/AJ224621
SI  - GENBANK/AJ224622
SI  - GENBANK/AJ224623
SI  - GENBANK/AJ224624
SI  - GENBANK/AJ224625
SI  - GENBANK/AJ224626
SI  - GENBANK/AJ224627
SI  - GENBANK/AJ224628
SI  - GENBANK/AJ224629
SI  - GENBANK/AJ224630
SI  - GENBANK/AJ224631
SI  - GENBANK/AJ224632
SI  - GENBANK/AJ224633
SI  - GENBANK/AJ224634
SI  - GENBANK/AJ224635
SI  - GENBANK/AJ224636
SI  - GENBANK/AJ224637
SI  - GENBANK/AJ224638
PT  - Comparative Study
PT  - Journal Article
PT  - Research Support, Non-U.S. Gov't
PL  - Netherlands
TA  - Virus Res
JT  - Virus research
JID - 8410979
RN  - 0 (RNA, Viral)
SB  - IM
MH  - Base Sequence
MH  - Capsid/genetics
MH  - China
MH  - Hordeum/*virology
MH  - Japan
MH  - Phylogeny
MH  - Potyvirus/classification/*genetics/isolation & purification
MH  - RNA, Viral/chemistry/genetics
MH  - Sequence Alignment
EDAT- 1999/09/29 00:00
MHDA- 1999/09/29 00:01
CRDT- 1999/09/29 00:00
PHST- 1999/09/29 00:00 [pubmed]
PHST- 1999/09/29 00:01 [medline]
PHST- 1999/09/29 00:00 [entrez]
AID - S0168-1702(99)00076-3 [pii]
AID - 10.1016/s0168-1702(99)00076-3 [doi]
PST - ppublish
SO  - Virus Res. 1999 Oct;64(1):13-21. doi: 10.1016/s0168-1702(99)00076-3.