PMID- 10319815 OWN - NLM STAT- MEDLINE DCOM- 19990520 LR - 20190705 IS - 0092-8674 (Print) IS - 0092-8674 (Linking) VI - 97 IP - 3 DP - 1999 Apr 30 TI - Crystal structure of human cytosolic phospholipase A2 reveals a novel topology and catalytic mechanism. PG - 349-60 AB - Cytosolic phospholipase A2 initiates the biosynthesis of prostaglandins, leukotrienes, and platelet-activating factor (PAF), mediators of the pathophysiology of asthma and arthritis. Here, we report the X-ray crystal structure of human cPLA2 at 2.5 A. cPLA2 consists of an N-terminal calcium-dependent lipid-binding/C2 domain and a catalytic unit whose topology is distinct from that of other lipases. An unusual Ser-Asp dyad located in a deep cleft at the center of a predominantly hydrophobic funnel selectively cleaves arachidonyl phospholipids. The structure reveals a flexible lid that must move to allow substrate access to the active site, thus explaining the interfacial activation of this important lipase. FAU - Dessen, A AU - Dessen A AD - Biochemistry, Wyeth Research, Cambridge, Massachusetts 02140, USA. adessen@genetics.com FAU - Tang, J AU - Tang J FAU - Schmidt, H AU - Schmidt H FAU - Stahl, M AU - Stahl M FAU - Clark, J D AU - Clark JD FAU - Seehra, J AU - Seehra J FAU - Somers, W S AU - Somers WS LA - eng SI - PDB/1CJY PT - Journal Article PL - United States TA - Cell JT - Cell JID - 0413066 RN - 0 (Phospholipids) RN - 0 (Solvents) RN - 27YG812J1I (Arachidonic Acid) RN - EC 3.- (Hydrolases) RN - EC 3.1.1.32 (Phospholipases A) RN - EC 3.1.1.4 (Phospholipases A2) RN - SY7Q814VUP (Calcium) SB - IM MH - Animals MH - Arachidonic Acid/metabolism MH - Binding Sites/*genetics MH - CHO Cells MH - Calcium/*metabolism MH - Catalytic Domain/*genetics MH - Cricetinae MH - Crystallography, X-Ray MH - Cytosol/enzymology MH - Humans MH - Hydrolases/chemistry/metabolism MH - Molecular Sequence Data MH - Phospholipases A/*chemistry/genetics/*metabolism MH - Phospholipases A2 MH - Phospholipids/metabolism MH - Protein Folding MH - Protein Structure, Secondary MH - Protein Structure, Tertiary MH - Sequence Homology, Amino Acid MH - Solvents EDAT- 1999/05/13 00:00 MHDA- 1999/05/13 00:01 CRDT- 1999/05/13 00:00 PHST- 1999/05/13 00:00 [pubmed] PHST- 1999/05/13 00:01 [medline] PHST- 1999/05/13 00:00 [entrez] AID - S0092-8674(00)80744-8 [pii] AID - 10.1016/s0092-8674(00)80744-8 [doi] PST - ppublish SO - Cell. 1999 Apr 30;97(3):349-60. doi: 10.1016/s0092-8674(00)80744-8.