PMID- 10068513 OWN - NLM STAT- MEDLINE DCOM- 19990413 LR - 20071115 IS - 1096-7192 (Print) IS - 1096-7192 (Linking) VI - 66 IP - 2 DP - 1999 Feb TI - Identification and detection of the common 65-kb deletion breakpoint in the nephropathic cystinosis gene (CTNS). PG - 111-6 AB - The most common mutation in the cystinosis gene, CTNS, is a 65-kb deletion thought to have originated in Germany. Although homozygotes for this deletion are detectable by the absence of the D17S829 polymorphic marker, no method exists to identify heterozygotes. We identified the 65-kb deletion breakpoints and used flanking PCR primers to amplify a 423-bp fragment present only in the deletion alleles. Using this method, we determined that 121 of 216 (56%) cystinosis alleles examined bore the 65-kb deletion. We found no non-Europeans with the deletion, and the deletion size and breakpoints appeared identical in all patients studied, supporting the concept of a founder effect. The addition of D17S829 primers (266 bp apart) to the PCR created a multiplex PCR system useful for diagnosing cystinosis patients homozygous and heterozygous for the 65-kb deletion. FAU - Anikster, Y AU - Anikster Y AD - Heritable Disorders Branch, National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland 20892, USA. FAU - Lucero, C AU - Lucero C FAU - Touchman, J W AU - Touchman JW FAU - Huizing, M AU - Huizing M FAU - McDowell, G AU - McDowell G FAU - Shotelersuk, V AU - Shotelersuk V FAU - Green, E D AU - Green ED FAU - Gahl, W A AU - Gahl WA LA - eng SI - GENBANK/AF112441 SI - GENBANK/AF112442 SI - GENBANK/AH008011 PT - Journal Article PT - Research Support, Non-U.S. Gov't PL - United States TA - Mol Genet Metab JT - Molecular genetics and metabolism JID - 9805456 RN - 0 (Amino Acid Transport Systems, Neutral) RN - 0 (CTNS protein, human) RN - 0 (DNA Primers) RN - 0 (Glycoproteins) RN - 0 (Membrane Proteins) RN - 0 (Membrane Transport Proteins) SB - IM MH - Alleles MH - Amino Acid Transport Systems, Neutral MH - Base Sequence MH - Cystinosis/*genetics/pathology MH - DNA Primers MH - *Glycoproteins MH - Humans MH - Membrane Proteins/*genetics MH - Membrane Transport Proteins MH - Molecular Sequence Data MH - Polymerase Chain Reaction MH - *Sequence Deletion EDAT- 1999/03/09 00:00 MHDA- 1999/03/09 00:01 CRDT- 1999/03/09 00:00 PHST- 1999/03/09 00:00 [pubmed] PHST- 1999/03/09 00:01 [medline] PHST- 1999/03/09 00:00 [entrez] AID - S1096-7192(98)92790-1 [pii] AID - 10.1006/mgme.1998.2790 [doi] PST - ppublish SO - Mol Genet Metab. 1999 Feb;66(2):111-6. doi: 10.1006/mgme.1998.2790.