Identification and Provenance fields
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Object ID:
Type ID:Human
Name:
Title: -
Version:1.1
Created: Jan 17, 2018 09:40:17
Created by: Lama Elzohary(lama@gwu.edu)
Modified: -
Modified by: -
Digital Signature:
Verification status:in_progress
Publication_status:Draft
Authors:

Description
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This table contains 41 somatic variants predicted to cause a gain of the consensus NXS/T motif at that position in at least three cancer types.
These variants include ONLY those somatic variants WITHOUT germline variants occurring at the same positions occurring in three or more cancers.




Table Headers
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Column Header		Description
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UniProtKB_AC			UniProtKB/Swiss-Prot Accession

Gene_Name: The recommended name that is used to officially represent a gene
Motif_Position: The Position of the "N" in the identified NXS/T sequon
Subsequence: Four-residue sequence about the NXS/T sequon beginning with the "N"
Mutation_Position:Position of the altered residue
Reference:Reference amino acid
Variation:Position of nucleotide variation within the coding frame
PolyPhen2_Prediction:Functional prediction reported by PolyPhen2 software; can be possibly damaging,
 probably damaging, or benign
Cancer_Type:Disease ontology ID (DOID) and label of cancers associated with samples containing this variant
Four-residue sequence including NXS/T motif reported by NetNGlyc
netGlycPrediction:Likelihood of actual glycosylation at the sequon, as reported by NetNGlyc

Statistics
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UniProtKB_AC: 7345
Gene_Name: 7342
Motif_Position: 2230
Subsequence: 768
Mutation_Position: 2240
Reference: 17
Variation: 8
PolyPhen2_Prediction: 4
Cancer_Type: 226
netGlycMotif: 768
netGlycPrediction: 6