doc_id	sent_index	relation_id	relation	trigger	trigger_offset	arg_num	arg_base_np	arg_protein	arg_domain	arg_site	arg_sugar	PSource	SiteSource	NProtein	NID	SiteName	sent_text
27773385	3	42	gly	glycoprotein	556:567	arg1	glycoprotein	glycoprotein				Fterm		glycoprotein			One type of enzyme-mediated glycan attachment, fucosylation, can mediate glycoprotein and glycolipid cell surface expression, trafficking, secretion, and quality control to modulate a variety of inter- and intracellular signaling cascades.
25081519	7	67	gly	Pectin	1099:1104	arg1	acidic and neutral sugars	Pectin			acidic and neutral sugars	Fterm		Pectin			Pectin composition (acidic and neutral sugars) and physicochemical properties (molar mass and intrinsic viscosity) were determined.
27773385	8	74	gly	N-glycoproteins	1827:1841	arg1	N-glycoproteins	N-glycoproteins				Fterm		N-glycoproteins			Given that FUT8 is the only α-1,6-fucosyltransferase expressed in mammals, the concurrent decrease in AAL binding in schizophrenia, particularly evident for N-glycoproteins in the ~52-58kDa and ~60-70kDa molecular mass ranges, likely reflects a consequence of abnormal FUT8 expression in the disorder.
24136552	3	0	gly	glycosylated	665:676	arg1	constituent proteins	constituent proteins				Fterm		proteins			From the perspective of plant scientists, lectin enrichment has proven useful for studies of the proteomes of the secretory pathways and cell wall, due to the high proportion of constituent proteins that are glycosylated.
24742328	10	35	gly	metabolism	1709:1718	arg1	Bacteroides spp	spp			metabolism	OGER		spp	Q8TCT9		CONCLUSIONS Structural and sequence analyses of the BT_1012 protein identifies it as a glycosyl hydrolase, expanding an already impressive catalog of enzymes involved in polysaccharide metabolism in Bacteroides spp.
27611601	0	63	gly	Robo1	71:75	arg1	Heparan Sulfate Ligand Requirements	Robo1			Heparan Sulfate Ligand Requirements	OGER		Robo1	Q9Y6N7		Integrated Approach to Identify Heparan Sulfate Ligand Requirements of Robo1.
25501675	9	81	gly	glycopeptides	1487:1499	arg2	additional glycopeptides			additional glycopeptides						glycopeptides	In addition to those previously reported, additional glycopeptides were detected with moderate abundance.
27526028	1	31	gly	glycosylated	99:110	arg1	Dystroglycan	receptor			Dystroglycan	Fterm		receptor			Dystroglycan is a highly glycosylated extracellular matrix receptor with essential functions in skeletal muscle and the nervous system.
25129734	1	33	gly	position	141:148	arg1	glucose units			position	glucose units					position	The primary hydroxyl groups on C6 position in glucose units of cellulose with H3PO4/HNO3-NaNO2 mediated oxidation produced monocarboxy cellulose and binding sites, subsequent amide reaction with chitosan solution to obtain chitosan crosslinked cotton fabrics.
28204541	3	15	gly	pgm	657:659	arg1	the cell wall monosaccharide composition	pgm			the cell wall monosaccharide composition	PUBTATOR		pgm	P13611		We could not determine any changes in leaf cutin and epicuticular wax composition or indolic glucosinolate levels, but detected complex alterations in the cell wall monosaccharide composition of pgm.
24428850	9	94	gly	had	1170:1172	arg1	RESULTS Oyster protein AND no sugar	RESULTS Oyster protein			no sugar	Fterm		protein			RESULTS Oyster protein had a minimum F-value (the mole ratio of branched-chain amino acids to aromatic amino acids) (2.68), contained 1.85 mmol/mL taurine and no sugar.
25497797	8	15	gly	attached	1841:1848	arg1	CMP AND glycans	CMP			glycans	OGER		CMP	P21941		The predominant forms of glycans attached to CMP were found to be the acidic tetrasaccharide {N-acetyl-neuraminic acid α(2-3)galactose β(1-3)[N-acetyl-neuraminic acid α(2-6)]N-acetyl galactose} or trisaccharides {N-acetyl-neuraminic acid α(2-3)galactose β(1-3)N-acetyl galactose and galactose β(1-3)[N-acetyl-neuraminic acid (α2-6)]N-acetyl galactose}.
28120014	2	1	gly	domain	330:335	arg1	a fibronectin III-like domain repeat				a fibronectin III-like domain repeat						It contains an N-terminal catalytic domain (family 6 of glycosyl hydrolases (GH6)), followed by a fibronectin III-like domain repeat (Fn31,2) and a C-terminal family 3b cellulose-binding domain (CBM3b).
24444939	6	34	gly	residue	763:769	arg1	every four xylose residues			residue	every four xylose residues					residue	The repeating unit of CTPB1 is composed of one non-reducing terminal residue of 4-O-methyl-D-glucuronic acid on every four xylose residues.
24136552	1	31	gly	glycoproteins	238:250	arg1	glycoproteins	glycoproteins				Fterm		glycoproteins			Lectins are proteins that bind to sugars with varying specificities and several have been identified that show differential binding to structurally variable glycans attached to glycoproteins.
24136552	1	34	gly	attached	226:233	arg1	glycoproteins AND structurally variable glycans	glycoproteins			structurally variable glycans	Fterm		glycoproteins			Lectins are proteins that bind to sugars with varying specificities and several have been identified that show differential binding to structurally variable glycans attached to glycoproteins.
25463790	0	25	gly	composition	63:73	arg1	arabinoxylan-oligosaccharide mixtures			position	arabinoxylan-oligosaccharide mixtures					position	Production of arabinoxylan-oligosaccharide mixtures of varying composition from rye bran by a combination of process conditions and type of xylanase.
26109616	19	3	gly	N-glycans	3623:3631	arg1	integrin β1	integrin β1			N-glycans	PUBTATOR		integrin β1	3688		Moreover, decreased β1,6-GlcNAc-branched N-glycans and increased bis-GlcNAc-branched N-glycans on integrin β1 (P < 0.05) were observed in the ESM group.
26109616	19	25	gly	N-glycans	3579:3587	arg1	integrin β1	integrin β1			N-glycans	PUBTATOR		integrin β1	3688		Moreover, decreased β1,6-GlcNAc-branched N-glycans and increased bis-GlcNAc-branched N-glycans on integrin β1 (P < 0.05) were observed in the ESM group.
27067053	1	25	gly	glycopeptides	122:134	arg2	plant intact glycopeptides			plant intact glycopeptides						glycopeptides	This study presents the first large-scale analysis of plant intact glycopeptides.
26099260	1	45	gly	glycopeptides	394:406	arg2	macrocyclic glycopeptides			macrocyclic glycopeptides						glycopeptides	High-performance liquid chromatographic methods were developed for the separation of enantiomers of four unnatural paclitaxel precursor phenylisoserine analogs on chiral stationary phases containing macrocyclic glycopeptides and cyclofructans as chiral selectors.
27773385	5	102	gly	N-glycoprotein	1321:1334	arg1	α-1,6-fucosylated N-glycoprotein abundance	α-1,6-fucosylated N-glycoprotein abundance				Fterm		N-glycoprotein			We also used the fucose binding protein, Aleuria aurantia lectin (AAL), to assess α-1,6-fucosylated N-glycoprotein abundance in the same subjects.
28189483	11	64	gly	used	1489:1492	arg2	This composites			This composites						composites	This composites can be used in this new field for stem cells differentiation to target tissues.
28609623	5	40	gly	N-glycopeptides	1267:1281	arg2	N-glycopeptides			N-glycopeptides						N-glycopeptides	The CS@PGMA@IDA-Ti4+ nanomaterials demonstrate an outstanding ability for N-glycopeptides and phosphopeptides enrichment simultaneously, evaluated by the extremely high binding capacity (150 mg g-1), sensitivity (above 0.1 fmol), and high enrichment recovery (above 75.4%).
26099260	0	17	gly	glycopeptide	121:132	arg2	macrocyclic glycopeptide			macrocyclic glycopeptide						glycopeptide	High-performance liquid chromatographic separation of paclitaxel intermediate phenylisoserine derivatives on macrocyclic glycopeptide and cyclofructan-based chiral stationary phases.
26428122	5	9	gly	DAc	756:758	arg1	more GalA	DAc			more GalA	OGER		DAc	P22760		Enzymatically isolated pectin was characterised by larger molecular mass and contained more GalA of higher DM and DAc than polymer extracted with acid.
26961813	1	25	gly	heteropolysaccharide	107:126	arg1	various positions			various positions	various positions		Site			positions,	Chondroitin sulfate (CS) is a linear heteropolysaccharide of repeating disaccharide units bearing sulfate groups in various positions, commonly at C4 and/or C6 of galactosamine.
25251456	6	14	gly	lignin	1194:1199	arg1	Ara substitution degree	lignin			Ara substitution degree	Fterm		lignin			Notably, despite that the non-KOH-extractable residues covered 12%-23% hemicelluloses and lignin of total biomass, their wall polymer features exhibited the predominant effects on biomass enzymatic hydrolysis including Ara substitution degree of xylan (reverse Xyl/Ara) and S/G ratio of lignin.
27343705	8	16	gly	used	1443:1446	arg2	the BC-magnetite composites			the BC-magnetite composites						composites	Our results proved that the BC-magnetite composites could be used for an efficient removal of chromium(VI) from diluted solutions with a minimum magnetite dissolution during operation.
28602197	6	29	gly	utilized	968:975	arg2	The β-CDs-GQDs composites			The β-CDs-GQDs composites						composites	The β-CDs-GQDs composites utilized nanosize of GQDs and enantioselectivity of β-CDs to realize chiral recognition of Tyr.
26015261	6	25	gly	afucosylated	1201:1212	arg1	uniform afucosylated complex type glycans				uniform afucosylated complex type glycans						The N-linked glycosylation pathway in Pichia pastoris has been engineered to produce human-like N-linked glycosylation with uniform afucosylated complex type glycans.
27067053	5	23	gly	detected	808:815	arg1	a protein AND N-linked sugars	a protein			N-linked sugars	Fterm		protein			While most of the modified proteins are secreted, membrane, endoplasmic reticulum (ER), or Golgi-localized proteins, surprisingly, N-linked sugars were detected on a protein predicted to be cytosolic or nuclear.
28970843	3	64	gly	UDP-sugar	510:518	arg1	Arabidopsis (two isozymes) UDP-glucose pyrophosphorylases	UDP-sugar pyrophosphorylase			Arabidopsis (two isozymes) UDP-glucose pyrophosphorylases	PUBTATOR		UDP-sugar pyrophosphorylase	835333		Here, substrate specificities of barley and Arabidopsis (two isozymes) UDP-glucose pyrophosphorylases (UGPase), Arabidopsis UDP-sugar pyrophosphorylase (USPase) and Arabidopsis UDP-N-acetyl glucosamine pyrophosphorylase2 (UAGPase2) were investigated using a range of sugar-1-phosphates and nucleoside-triphosphates as substrates.
27198846	1	72	gly	composition	332:342	arg1	other consumed carbohydrates			position	other consumed carbohydrates					position	SCOPE We aimed to investigate the effects of three different soluble pectins on the digestion of other consumed carbohydrates, and the consequent alterations of microbiota composition and SCFA levels in the intestine of pigs.
27773385	4	36	gly	plasma	1097:1102	arg1	5 key fucose-modifying enzymes	plasma α-l-fucosidase			5 key fucose-modifying enzymes	PUBTATOR		plasma α-l-fucosidase	2519		Building on prior reports of glycosylation abnormalities and evidence of dysregulated glycosylation enzyme expression in schizophrenia, we examined the protein expression of 5 key fucose-modifying enzymes: GDP-fucose:protein O-fucosyltransferase 1 (POFUT1), GDP-fucose:protein O-fucosyltransferase 2 (POFUT2), fucosyltransferase 8 (FUT8), fucosyltransferase 11 (FUT11), and plasma α-l-fucosidase (FUCA2) in postmortem superior temporal gyrus of schizophrenia (N=16) and comparison (N=14) subjects.
25501675	8	104	gly	glycopeptides	1377:1389	arg2	over 90 glycopeptides			over 90 glycopeptides						glycopeptides	From the trypsin-digested mixture of these two products, over 90 glycopeptides were identified by accurate mass matching.
28609623	2	36	gly	glycoproteins	597:609	arg1	many glycoproteins	many glycoproteins				Fterm		glycoproteins			Comprehensive characterization of the phosphoproteome and glycoproteome requires highly specific and sensitive enrichment methods of purification of phosphopeptides and glycopeptides because many glycoproteins and phosphoproteins naturally occur at low abundances and substoichiometry.
28609623	2	117	gly	glycopeptides	570:582	arg2	glycopeptides			glycopeptides						glycopeptides	Comprehensive characterization of the phosphoproteome and glycoproteome requires highly specific and sensitive enrichment methods of purification of phosphopeptides and glycopeptides because many glycoproteins and phosphoproteins naturally occur at low abundances and substoichiometry.
25039673	0	45	gly	endotoxin	28:36	arg1	Determinants	endotoxin			Determinants	Fterm		endotoxin			Determinants of house dust, endotoxin, and β-(1→3)-D-glucan in homes of Danish children.
25039673	0	80	gly	β-	43:44	arg1	Determinants	-(1→3			Determinants	PUBTATOR		-(1→3	28888		Determinants of house dust, endotoxin, and β-(1→3)-D-glucan in homes of Danish children.
28100988	3	37	gly	released	325:332	arg1	glycoproteins AND N-glycans	glycoproteins			N-glycans	Fterm		glycoproteins			N-glycans are typically released from glycoproteins by enzymes, while O-glycans are released from glycoproteins by chemical methods.
28100988	3	49	gly	glycoproteins	339:351	arg1	glycoproteins	glycoproteins				Fterm		glycoproteins			N-glycans are typically released from glycoproteins by enzymes, while O-glycans are released from glycoproteins by chemical methods.
28100988	3	80	gly	released	385:392	arg2	glycoproteins AND O-glycans	glycoproteins			O-glycans	Fterm		glycoproteins			N-glycans are typically released from glycoproteins by enzymes, while O-glycans are released from glycoproteins by chemical methods.
28100988	3	94	gly	glycoproteins	399:411	arg1	glycoproteins	glycoproteins				Fterm		glycoproteins			N-glycans are typically released from glycoproteins by enzymes, while O-glycans are released from glycoproteins by chemical methods.
27496768	4	66	gly	glycoprotein	633:644	arg1	humanized Man5GlcNAc2 N-linked oligosaccharides	glycoprotein			humanized Man5GlcNAc2 N-linked oligosaccharides	Fterm		glycoprotein			In the present study, we describe the generation of a Saccharomyces cerevisiae strain capable of producing a glycoprotein with humanized Man5GlcNAc2 N-linked oligosaccharides, an intermediate of mammalian hybrid- and complex-type oligosaccharides, while suppressing O-mannosylation.
28182562	7	61	gly	channels	997:1004	arg1	complex structures	channels			complex structures	Fterm		channels			Also, decomposing the sum of K+ currents is difficult because of complex structures and components of channels (e.g., , and ).
28349375	9	17	gly	used	1390:1393	arg2	Chitosan-based biopolymer composites			Chitosan-based biopolymer composites						composites	Chitosan-based biopolymer composites could be used for improved biomedical applications such as wound dressings, giving them enhanced properties.
25423718	2	10	gly	heterogeneity	409:421	arg1	the outer membrane lipopolysaccharide pool				the outer membrane lipopolysaccharide pool						Cultivation in the presence of the flavonoid was shown to result in altered serological characteristics of the bacteria, increased heterogeneity of the outer membrane lipopolysaccharide pool, as well as in modified composition and fatty acid ratio of lipid A.
28204541	5	69	gly	epitopes	970:977	arg1	overall cell wall polysaccharide extractability			epitopes	overall cell wall polysaccharide extractability					epitopes	Glycome profiling analysis showed that both overall cell wall polysaccharide extractability and relative extractability of specific pectin and xylan epitopes were affected in pgm, suggesting extensive structural changes in pgm cell walls.
28970843	1	2	gly	glycoproteins	207:219	arg1	cell wall polysaccharides	glycoproteins			cell wall polysaccharides	Fterm		glycoproteins			UDP-sugars are essential precursors for glycosylation reactions producing cell wall polysaccharides, sucrose, glycoproteins, glycolipids, etc.
27496768	5	60	gly	glycoprotein	845:856	arg1	Man5GlcNAc2	glycoprotein			Man5GlcNAc2	Fterm		glycoprotein			First, a yeast strain that produces a glycoprotein with Man5GlcNAc2 was isolated by introducing msdS encoding α-1,2-mannosidase into a strain synthesizing Man8GlcNAc2 N-linked oligosaccharides.
28182562	1	43	gly	glycosylated	167:178	arg1	Cardiac ion channels	Cardiac ion channels				Fterm		channels			Cardiac ion channels are highly glycosylated membrane proteins with up to 30% of the protein's mass containing glycans.
29078183	3	11	gly	glycosylated	404:415	arg1	a glycosylated domain			a glycosylated domain						domain	The protein contained a hydrophobic patch and a glycosylated domain and due to its dual functionality, it was able to assemble at the interface of the carbon nanotubes and the nanofibrillated cellulose and thus enhance the interactions between them.
25140501	6	42	gly	glycoprotein	738:749	arg1	bovine serum fetuin glycoprotein	bovine serum fetuin glycoprotein				Fterm		glycoprotein			Magnetized Parkia pendula seeds gum with covalently immobilized Concanavalin A was used as an affinity matrix for the recognition of bovine serum fetuin glycoprotein.
27681534	9	20	gly	used	1110:1113	arg2	The appropriate lipid composition			The appropriate lipid composition						position	The appropriate lipid composition was used for the preparation of a larger quantity of liposomes coated by modified chitosan.
25688146	3	16	gly	glycoprotein	864:875	arg1	a glycoprotein IIb/IIIa antagonist	a glycoprotein IIb/IIIa antagonist				Fterm		glycoprotein			We evaluated hospital variability in the composite use of American College of Cardiology/American Heart Association guideline-recommended therapies (adherence) and the proportion of treated patients with the recommended dose of heparins or a glycoprotein IIb/IIIa antagonist (safety), and its association with risk-adjusted in-hospital mortality and bleeding.
30198674	3	35	gly	acid	713:716	arg1	H(2)			H(2)						H(2)	Research with medium of sulfuric acid (H(2)SO(4)), dilute alkali (NaOH) and glycerin, and at different pretreatment temperature (117 and 135 ℃ in sulfuric acid (H(2)SO(4))and dilute alkali (NaOH) , 117 ℃ in glycerin) analyzed and compared the main changes of chemical composition before and after the bamboo processing, and further confirmed that the mechanism of the chemical conversion after chemical pretreatment of bamboo through the Fourier infrared spectrum.
25113805	9	53	gly	proteoglycan	1523:1534	arg1	the distal region			the distal region	the distal region		Site			region	Histological analysis showed that collagen and proteoglycan in the distal region distributed differently from the proximal region.
26426455	2	5	gly	used	350:353	arg2	a tripolymeric composite			a tripolymeric composite						composite	We report a curcumin nanoparticle with a tripolymeric composite that can be used as a delivery device for wound healing.
27067053	2	6	gly	compositions	329:340	arg1	over 1100 glycopeptides			over 1100 glycopeptides	over 1100 glycopeptides		Site			glycopeptides	Using wheat germ agglutinin lectin weak affinity chromatography to enrich modified peptides, followed by electron transfer dissociation (ETD)(1) fragmentation tandem mass spectrometry, glycan compositions on over 1100 glycopeptides from 270 proteins found in Arabidopsis inflorescence tissue were characterized.
27067053	2	20	gly	proteins	378:385	arg1	glycan compositions	proteins			glycan compositions	Fterm		proteins			Using wheat germ agglutinin lectin weak affinity chromatography to enrich modified peptides, followed by electron transfer dissociation (ETD)(1) fragmentation tandem mass spectrometry, glycan compositions on over 1100 glycopeptides from 270 proteins found in Arabidopsis inflorescence tissue were characterized.
27067053	2	28	gly	glycopeptides	355:367	arg2	over 1100 glycopeptides			over 1100 glycopeptides						glycopeptides	Using wheat germ agglutinin lectin weak affinity chromatography to enrich modified peptides, followed by electron transfer dissociation (ETD)(1) fragmentation tandem mass spectrometry, glycan compositions on over 1100 glycopeptides from 270 proteins found in Arabidopsis inflorescence tissue were characterized.
25272744	7	27	gly	glycoprotein	1130:1141	arg1	glycoprotein	glycoprotein				Fterm		glycoprotein			The composition, size, and the zeta-potential of interaction products were assessed which allowed us to select the conditions for the preparation of pH-sensitive polyelectrolyte microparticles loaded with LF which would be able to gradually release glycoprotein under conditions that model the passage through the gastrointestinal tract of humans.
25039673	1	49	gly	endotoxin	166:174	arg1	determinants	endotoxin			determinants	Fterm		endotoxin			Little is known about the geographic variation and determinants of bacterial endotoxin and β-(1,3)-D-glucan in Danish house dust.
24950216	6	91	gly	glycosylation	1048:1060	arg1	E protein ectodomain			E protein ectodomain						ectodomain	METHODOLOGY/PRINCIPAL FINDINGS In this study, we investigated the expression, membrane association, glycosylation pattern, secretion and particle formation of E protein ectodomain of DENV4 in the presence or absence of prM protein.
28609623	8	124	gly	N-glycopeptides	2267:2281	arg2	N-glycopeptides			N-glycopeptides						N-glycopeptides	The results demonstrated that the method based on CS@PGMA@IDA-Ti4+ to single-step enrichment of N-glycopeptides and phosphopeptides is simple, efficient, specific, and compatible to MS. It can be expected that CS@PGMA@IDA-Ti4+ would hold great applicability of modification-based proteomics to the precious and low amounts of clinical samples.
29078183	0	13	gly	glycosylated	48:59	arg1	amphiphilic glycosylated proteins	amphiphilic glycosylated proteins				Fterm		proteins			Modification of carbon nanotubes by amphiphilic glycosylated proteins.
24447999	1	83	gly	leucine-rich	122:133	arg1	a small leucine-rich proteoglycan			leucine	a small leucine-rich proteoglycan					leucine	Decorin is a small leucine-rich proteoglycan harboring a single glycosaminoglycan chain, which, in skin, is mainly composed of dermatan sulfate (DS).
24136552	2	28	gly	glycoproteins	375:387	arg1	glycoproteins	glycoproteins				Fterm		glycoproteins			Consequently, lectin affinity chromatography represents a valuable tool for glycoproteome studies, allowing enrichment of glycoproteins in samples prior to their identification by mass spectrometry (MS).
26015261	8	16	gly	glycosylation	1502:1514	arg1	afucosylated anti-CS1 mAb	afucosylated anti-CS1 mAb				PUBTATOR		CS1	1442		Our results indicate that Fc glycosylation is critical for in vivo efficacy and afucosylated anti-CS1 mAb expressed in glycoengineered Pichia pastoris shows a better in vivo efficacy in tumor regression when compared to fucosylated anti-CS1 mAb expressed in HEK293 cells.
24447999	7	42	gly	micro-heterogeneity	1303:1321	arg1	skin Dcn	skin Dcn				PUBTATOR		Dcn	13179		Functionally, we found altered fibroblast growth factor (Fgf)-7 and -2 binding due to changes in the micro-heterogeneity of skin Dcn(-/-) CS/DS.
24447999	4	71	gly	Dcn	779:781	arg1	the glycosaminoglycan content	Dcn(-/-			the glycosaminoglycan content	PUBTATOR		Dcn(-/-	13179		To determine the impact of the loss of DS-decorin in the dermis, we analyzed the glycosaminoglycan content of Dcn(-/-) and wild-type mouse skin.
25497797	6	21	gly	isoforms	1378:1385	arg1	1 to 3 O-linked glycans	CMP isoforms			1 to 3 O-linked glycans	OGER		CMP isoforms	P21941		By in-depth analysis of the CMP chromatographic profile, multiple CMP isoforms with 1 to 3 O-linked glycans (1-3 G) and 1 to 3 phosphate groups (1-3 P) were identified, as well as nonmodified CMP isoforms.
28100988	4	89	gly	glycoproteins	507:519	arg1	N-	glycoproteins			N-	Fterm		glycoproteins			It is important to identify and quantify both N- and O-linked glycans of glycoproteins to determine the changes of glycans.
28100988	4	89	gly	glycoproteins	507:519	arg1	O-linked glycans	glycoproteins			O-linked glycans	Fterm		glycoproteins			It is important to identify and quantify both N- and O-linked glycans of glycoproteins to determine the changes of glycans.
29133089	8	13	gly	used	1204:1207	arg2	the prepared nanocomposite			the prepared nanocomposite						nanocomposite	The cytotoxic effects suggest that the prepared nanocomposite could be used as promising candidates for biomedical applications.
24950216	7	100	gly	contained	1354:1362	arg1	full-length E protein AND high mannose glycans	full-length E protein			high mannose glycans	PUBTATOR		E protein	32430		E protein ectodomain associated with membrane in or beyond trans-Golgi and contained primarily complex glycans, whereas full-length E protein associated with ER membrane and contained high mannose glycans.
24950216	7	74	gly	contained	1255:1263	arg1	E protein ectodomain AND complex glycans			E protein ectodomain	complex glycans					ectodomain	E protein ectodomain associated with membrane in or beyond trans-Golgi and contained primarily complex glycans, whereas full-length E protein associated with ER membrane and contained high mannose glycans.
24136552	0	21	gly	N-glycoprotein	0:13	arg1	N-glycoprotein	N-glycoprotein				Fterm		N-glycoprotein			N-glycoprotein enrichment by lectin affinity chromatography.
27067053	4	31	gly	glycopeptides	585:597	arg2	the identified glycopeptides			the identified glycopeptides						glycopeptides	Among the identified glycopeptides were four modified in nonconsensus glycosylation motifs.
27067053	4	35	gly	glycosylation	634:646	arg2	nonconsensus glycosylation motifs			nonconsensus glycosylation motifs						motifs	Among the identified glycopeptides were four modified in nonconsensus glycosylation motifs.
28118510	0	68	gly	peptidoglycan	18:30	arg1	the Bacillus subtilis cell-division site			the Bacillus subtilis cell-division site						site	Pentapeptide-rich peptidoglycan at the Bacillus subtilis cell-division site.
25184545	6	26	gly	disaccharide	862:873	arg1	threonine			threonine	threonine		AminoAcid			threonine	BLM is more potent than deglycoBLM in supercoiled plasmid DNA relaxation, while the analogue having the disaccharide on threonine was less active than deglycoBLM and the analogue containing the C-terminal disaccharide was slightly more potent.
25184545	4	60	gly	attached	535:542	arg1	deglycobleomycin AND the disaccharide moiety	deglycobleomycin		positions,	the disaccharide moiety	Fterm		deglycobleomycin		positions,	To explore this possibility, BLM analogues were prepared in which the disaccharide moiety was attached to deglycobleomycin at novel positions, namely, via the threonine moiety or C-terminal substituent.
25527660	8	81	gly	fucosylated	1589:1599	arg1	fucosylated HMOs	fucosylated HMOs				OGER		HMOs	P00540		Breastfeeding was protective against mortality only in HEU children with high concentrations of fucosylated HMOs.
25423718	3	1	gly	fragment	718:725	arg1	the terminal β-D-Glcp residue				the terminal β-D-Glcp residue						The flavonoid was shown to induce the synthesis of the O-specific polysaccharide with the repeating structure represented by a tetrasaccharide consisting of a linear trisaccharide fragment of α-L-Rhap residues in the main chain and the terminal β-D-Glcp residue.
25423718	3	13	gly	residues	739:746	arg1	a linear trisaccharide fragment			residues in	a linear trisaccharide fragment					residues in	The flavonoid was shown to induce the synthesis of the O-specific polysaccharide with the repeating structure represented by a tetrasaccharide consisting of a linear trisaccharide fragment of α-L-Rhap residues in the main chain and the terminal β-D-Glcp residue.
25423718	3	14	gly	residue	792:798	arg1	a linear trisaccharide fragment			a linear trisaccharide fragment	a linear trisaccharide fragment						The flavonoid was shown to induce the synthesis of the O-specific polysaccharide with the repeating structure represented by a tetrasaccharide consisting of a linear trisaccharide fragment of α-L-Rhap residues in the main chain and the terminal β-D-Glcp residue.
25423718	3	35	gly	residues	739:746	arg1	the terminal β-D-Glcp residue			residues in	the terminal β-D-Glcp residue					residues in	The flavonoid was shown to induce the synthesis of the O-specific polysaccharide with the repeating structure represented by a tetrasaccharide consisting of a linear trisaccharide fragment of α-L-Rhap residues in the main chain and the terminal β-D-Glcp residue.
27773385	6	31	gly	O-fucosylation	1473:1486	arg1	thrombospondin-like repeat domains			thrombospondin-like repeat domains							In schizophrenia, we found increased expression of POFUT2, a fucosyltransferase uniquely responsible for O-fucosylation of thrombospondin-like repeat domains that is involved in a non-canonical endoplasmic reticulum quality control pathway.
27773385	6	100	gly	domains	1518:1524	arg1	O-fucosylation				O-fucosylation						In schizophrenia, we found increased expression of POFUT2, a fucosyltransferase uniquely responsible for O-fucosylation of thrombospondin-like repeat domains that is involved in a non-canonical endoplasmic reticulum quality control pathway.
25201210	2	17	gly	used	369:372	arg2	The CNT-CH composite deposited			The CNT-CH composite deposited						deposited	The CNT-CH composite deposited on indium tin oxide (ITO)-coated glass electrode has been used to covalently interact with anti-apolipoprotein B (antibody: AAB) via a co-entrapment method.
26109616	0	144	gly	β1,6-GlcNAc	8:18	arg1	integrin β1	integrin β1			β1,6-GlcNAc	PUBTATOR		integrin β1	3688		Altered β1,6-GlcNAc and bisecting GlcNAc-branched N-glycan on integrin β1 are associated with early spontaneous miscarriage in humans.
26109616	0	154	gly	N-glycan	50:57	arg1	integrin β1	integrin β1			N-glycan	PUBTATOR		integrin β1	3688		Altered β1,6-GlcNAc and bisecting GlcNAc-branched N-glycan on integrin β1 are associated with early spontaneous miscarriage in humans.
28609623	7	8	gly	N-glycopeptides	1697:1711	arg2	N-glycopeptides			N-glycopeptides						N-glycopeptides	Furthermore, we used CS@PGMA@IDA-Ti4+ to enrich for N-glycopeptides and phosphopeptides followed by PNGase F treatment, fractionated and separated N-glycopeptides and phosphopeptides with different eluents, and then analyzed by MS, a total of 423 (84.4 ID/μg, 3.525 ID/min) N-glycopeptides in 235 different glycoproteins and 422 (84.4 ID/μg, 3.517 ID/min) phosphopeptides in 256 different phosphoproteins which were finally identified in two independent LC-MS/MS runs (with a total time of 120 min) from 50 μg of mouse liver.
28609623	7	26	gly	N-glycopeptides	1792:1806	arg2	N-glycopeptides			N-glycopeptides						N-glycopeptides	Furthermore, we used CS@PGMA@IDA-Ti4+ to enrich for N-glycopeptides and phosphopeptides followed by PNGase F treatment, fractionated and separated N-glycopeptides and phosphopeptides with different eluents, and then analyzed by MS, a total of 423 (84.4 ID/μg, 3.525 ID/min) N-glycopeptides in 235 different glycoproteins and 422 (84.4 ID/μg, 3.517 ID/min) phosphopeptides in 256 different phosphoproteins which were finally identified in two independent LC-MS/MS runs (with a total time of 120 min) from 50 μg of mouse liver.
28609623	7	39	gly	N-glycopeptides	1919:1933	arg2	423 (84.4 ID/μg, 3.525 ID/min) N-glycopeptides			423 (84.4 ID/μg, 3.525 ID/min) N-glycopeptides						N-glycopeptides	Furthermore, we used CS@PGMA@IDA-Ti4+ to enrich for N-glycopeptides and phosphopeptides followed by PNGase F treatment, fractionated and separated N-glycopeptides and phosphopeptides with different eluents, and then analyzed by MS, a total of 423 (84.4 ID/μg, 3.525 ID/min) N-glycopeptides in 235 different glycoproteins and 422 (84.4 ID/μg, 3.517 ID/min) phosphopeptides in 256 different phosphoproteins which were finally identified in two independent LC-MS/MS runs (with a total time of 120 min) from 50 μg of mouse liver.
28609623	7	47	gly	glycoproteins	1952:1964	arg1	235 different glycoproteins	235 different glycoproteins				Fterm		glycoproteins			Furthermore, we used CS@PGMA@IDA-Ti4+ to enrich for N-glycopeptides and phosphopeptides followed by PNGase F treatment, fractionated and separated N-glycopeptides and phosphopeptides with different eluents, and then analyzed by MS, a total of 423 (84.4 ID/μg, 3.525 ID/min) N-glycopeptides in 235 different glycoproteins and 422 (84.4 ID/μg, 3.517 ID/min) phosphopeptides in 256 different phosphoproteins which were finally identified in two independent LC-MS/MS runs (with a total time of 120 min) from 50 μg of mouse liver.
28576004	0	49	gly	poly	15:18	arg1	composite			composite						composite	Preparation of poly(lactic-co-glycolic acid) and chitosan composite nanocarriers via electrostatic self assembly for oral delivery of insulin.
27001601	1	2	gly	glycosylated	190:201	arg1	paulomycin A	paulomycin A				Cterm		paulomycin A			BACKGROUND Streptomyces albus J1074 produces glycosylated antibiotics paulomycin A, B and E that derive from chorismate and contain an isothiocyanate residue in form of paulic acid.
24528764	3	69	gly	aggrecan	400:407	arg1	glycosaminoglycan structure	aggrecan			glycosaminoglycan structure	PUBTATOR		aggrecan	280985		In this study, global molecular images and glycosaminoglycan structure of salmon nasal cartilage aggrecan purified from 4M guanidine hydrochloride extract were analyzed using HPLCs and atomic force microscopy with bovine tracheal cartilage aggrecan as a control.
26366533	2	18	gly	utilized	326:333	arg2	This composite			This composite						composite	This composite was utilized for the removal of methyl orange (MO) from aqueous solutions.
26985789	1	41	gly	glycosylated	158:169	arg1	Proteoglycans	proteins			Proteoglycans	Fterm		proteins			Proteoglycans (PGs) are heavily glycosylated proteins that play major structural and biological roles in many tissues.
26277752	7	11	gly	had	1005:1007	arg1	AHSG AND high total sugar content	AHSG			high total sugar content	OGER		AHSG	P02765		The results revealed that AHSG had high total sugar content (85.33%), small amount of uronic acids (5.63%) and it is likely a galactan-type polysaccharide.
26268558	7	77	gly	Asn	1409:1411	arg1	the N-glycans			Asn(263)	the N-glycans			Native IgA1	P01876	Asn(263)	The final models indicated that the N-glycans at Asn(263) were folded back against the Fc surface, the C-terminal tailpiece conformations were undefined and hinge O-galactosylation had little effect on the solution structure.
26015261	4	103	gly	site	721:724	arg1	the Fc glycan composition			N297 site	the Fc glycan composition			CS1	1442	N297 site	Modulations of the Fc glycan composition at the N297 site by selective mutations or afucosylation have been explored as strategies to develop bio-better therapeutics with enhanced ADCC activity.
25497797	12	73	gly	nonglycosylated	2676:2690	arg1	nonglycosylated CMP	nonglycosylated CMP				OGER		CMP	P21941		All the identified glycosylated CMP isoforms had lower reaction rates of release compared with that of nonglycosylated CMP, thus glycan modifications seemed to negatively influence the reaction rate of chymosin-induced hydrolysis of κ-CN.
25497797	12	112	gly	glycosylated	2592:2603	arg1	All the identified glycosylated CMP isoforms	All the identified glycosylated CMP isoforms				OGER		CMP isoforms	P21941		All the identified glycosylated CMP isoforms had lower reaction rates of release compared with that of nonglycosylated CMP, thus glycan modifications seemed to negatively influence the reaction rate of chymosin-induced hydrolysis of κ-CN.
25501675	12	2	gly	glycoproteins	1954:1966	arg1	glycoproteins	glycoproteins				Fterm		glycoproteins			The results demonstrate that this method could be utilized for biosimilarity determination and counterfeit identification of glycoproteins.
25501675	10	32	gly	glycosylation	1592:1604	arg2	a specific glycosylation site			a specific glycosylation site						site	The relative amount of each glycoform at a specific glycosylation site was determined based on reporter signal intensities of the TMT labeling reagents.
24136552	4	24	gly	glycoproteins	746:758	arg1	glycoproteins	glycoproteins				Fterm		glycoproteins			This chapter outlines a strategy to generate samples enriched with glycoproteins from bulk plant tissues prior to further characterization by MS, or other techniques.
27496768	1	42	gly	glycoproteins	146:158	arg1	glycoproteins	glycoproteins				Fterm		glycoproteins			Yeast cells have been engineered for the production of glycoproteins as biopharmaceuticals with humanized N-linked oligosaccharides.
25460985	4	7	gly	proteins	719:726	arg1	the polysaccharide COC group	proteins			the polysaccharide COC group	Fterm		proteins			Fourier transform-infrared spectroscopy analysis revealed changes in the polysaccharide COC group and the carboxyl group of proteins in the EPS in the presence of CuO NPs.
25501675	0	84	gly	glycoprotein	77:88	arg1	glycoprotein therapeutics	glycoprotein therapeutics				Fterm		glycoprotein			Direct site-specific glycoform identification and quantitative comparison of glycoprotein therapeutics: imiglucerase and velaglucerase alfa.
25527660	7	90	gly	fucosylated	1287:1297	arg1	non-2-linked fucosylated HMOs	non-2-linked fucosylated HMOs				OGER		HMOs	P00540		RESULTS Among HEU children, higher maternal breast-milk concentrations of 2-linked fucosylated HMOs [2'-fucosyllactose and lacto-N-fucopentaose (LNFP) I] (HR: 0.33; 95% CI: 0.14, 0.74) as well as non-2-linked fucosylated HMOs (3-fucosyllactose and LNFP II/III; HR: 0.28; 95% CI: 0.13, 0.67) were significantly associated with reduced mortality during, but not after, breastfeeding after adjustment for confounders.
27287166	3	74	gly	used	576:579	arg2	a new electrocatalytical nanocomposite			a new electrocatalytical nanocomposite						nanocomposite	β-CD-GQD modified GCE was used as a new electrocatalytical nanocomposite towards electrooxidation of Vitamin C (as sample analyte).
28723345	8	55	gly	used	1238:1241	arg2	immobilized α-Glu			immobilized α-Glu						Glu	Finally, immobilized α-Glu was used to screen enzyme inhibitors from the extracts of TCMs and vegetables.
26194765	1	15	gly	N-glycosylation	215:229	arg2	N-glycosylation sites			N-glycosylation sites						sites	The vast majority of cases of follicular lymphoma (FL), but not normal B cells, acquire N-glycosylation sites in the immunoglobulin variable regions during somatic hypermutation.
29033318	3	6	gly	fucosylated	462:472	arg1	fucosylated glycans				fucosylated glycans						Here, we focus on a fucose analog with an alkyne group, 6-alkynyl-fucose (6-Alk-Fuc), which is used widely as a detection probe for fucosylated glycans, but is also suggested for use as a fucosylation inhibitor.
26070414	6	18	gly	composition	879:889	arg1	the most important determinant			position	the most important determinant					position	Our results suggest that the most important determinant of microbiome composition is body compartment; communities derived from ileum are distinct from those from cecum and colon as observed by phylogenetic clustering analysis.