doc_id sent_index trigger PSource NProtein NID SiteName 28514686 1 glycoprotein Cterm Env 155971 28514686 1 glycoprotein PUBTATOR envelope glycoprotein 155971 27939510 0 residue residue 25124516 0 disialylated Cterm IgG 29032210 0 composition position 27449907 7 glycopeptide glycopeptide 26306633 7 fucosylated 26306633 7 sialyl-N-glycoproteins Fterm sialyl-N-glycoproteins 27508003 5 proteins Fterm proteins 25336511 1 used composites 25629585 0 glycoprotein Fterm glycoprotein 27688023 6 found sites 28640663 6 mannosylated 28356486 1 leucine-rich leucine 28356486 1 leucine-rich leucine 28356486 1 contained PUBTATOR SLRPs) decorin 1634 27449907 1 epitopes epitope 27449907 1 possesses domain 27449907 1 possesses PUBTATOR gp120 3700 epitopes 24842272 1 O-glycosylated Fterm proteins 27302279 4 fucosylated 27302279 4 sialylation 27302279 4 sialylation 24299772 6 residues residues at 27508003 0 glycosylation 29556562 0 highly-glycosylated PUBTATOR peroxidase 548137 27508003 11 released Fterm proteins 28258007 2 utilized composites 26721884 12 N-glycosylation sites 27185147 4 used composites 24174266 2 de-N-glycosylated peptides 28953376 4 intraglycopeptide intraglycopeptide 25629585 9 glycoproteins Fterm glycoproteins 25629585 9 glycopeptides Fterm glycoproteins glycopeptides 25844452 2 composition position, 24559734 6 galactose OGER 2:1 P35326 24559734 6 rhamnose OGER 2:1 P35326 24559734 6 glucose OGER 2:1 P35326 25157382 0 resistance position 25157382 0 composition position 28117421 2 sugars position 28640663 12 afucosylated 28640663 12 mannosylated 28640663 4 mannosylated 26871442 3 N-glycosylation site 28091940 7 sequence 28989689 5 glycosylation sites 26190688 7 chain OGER chain 16193 28953376 8 glycoproteins Fterm glycoproteins 24737672 7 glycoproteins Fterm glycoproteins 28953376 2 interactions sites 28953376 2 glycopeptides glycopeptides 28953376 2 glycosylation sites 28953376 2 N-glycosylation Fterm protein 26280087 4 glycopeptides glycopeptides 27760230 1 Strain Fterm Strain 25211026 5 undersialylated Cterm C 19122 25211026 5 undersialylated PUBTATOR PrP 19122 25211026 5 oversialylated Cterm C 19122 25211026 5 oversialylated PUBTATOR PrP 19122 29296958 7 O-glycosites O-glycosites 26296208 2 glycoproteins Fterm glycoproteins 26296208 2 glycosylation Fterm proteins 26296208 2 glycosylation Fterm glycoproteins 26686161 1 HN1 OGER HN1 Q9UK76 28347786 3 had OGER GPs 24415556 4 glycoprotein Fterm glycoprotein 25498203 4 G3983 G3983 and G3977 25498203 4 G3977 G3983 and G3977 24254641 3 proteins Fterm proteins 24254641 3 asparagine-linked asparagine 24737672 4 glycosylated Fterm receptor 25211026 6 sialylated Cterm Sc 19122 25211026 6 sialylated PUBTATOR PrP 19122 25171516 1 glycosylated Fterm proteins 25211026 8 de-sialylation Cterm C 19122 25211026 8 de-sialylation PUBTATOR PrP 19122 25211026 8 PrP PUBTATOR PrP 19122 24842272 0 glycopeptides glycopeptides 28797225 9 isolated Fterm strain 28797225 9 isolated Fterm strain 27508003 15 glycoprotein Fterm glycoprotein 25915761 4 carry Fterm proteins threonines 25915761 7 O-glycosylation threonine 24740695 4 glycoproteins Fterm glycoproteins 24740695 4 containing Fterm glycoproteins 25171516 2 protein Fterm protein 28989689 1 N-glycosylated Fterm protein 26280087 3 O-GlcNAc peptide 26483702 2 glycosylated Fterm protein 26483702 2 glycosylated PUBTATOR Native UT-A1 27411 26484870 8 glycosylated sites 28953376 1 glycoproteins Fterm glycoproteins 28953376 1 glycoprotein Fterm glycoprotein 24415556 3 glycoproteins Fterm glycoproteins 28891420 7 protein Fterm protein 24842272 7 glycopeptides glycopeptides 28068519 1 heparin Fterm heparin 28989689 2 glycosylation Fterm protein 25211026 0 glycoform PUBTATOR PrPSc 19122 25211026 0 protein Fterm protein 19122 29296958 6 O-glycosites O-glycosites 24057866 0 IgG Cterm IgG 24057866 0 fucosylation Cterm IgG 25211026 13 sialylation Cterm C 19122 25211026 13 sialylation PUBTATOR PrP 19122 25211026 13 PrP PUBTATOR PrP 19122 26553286 3 glycoprotein PUBTATOR a glycoprotein 351 24342348 0 N-glycoprotein Fterm N-glycoprotein 26871442 6 glycoproteins Fterm glycoproteins 25753715 1 glycoproteins Fterm glycoproteins 27760230 7 pssA OGER pssA P48651 26820354 0 strain Fterm strain 26290580 0 peptidoglycan muropeptides 29156586 8 glycopeptides glycopeptides 27939510 1 residue residue 28390831 5 presence OGER ANG P03950 28390831 5 presence OGER ANG P03950 28390831 5 presence OGER ANG P03950 26280087 5 peptides peptides 24737672 2 N-glycosylated 24737672 2 glycoproteins Fterm glycoproteins 27449907 0 glycoprotein Fterm glycoprotein 27083821 1 glycosylation 27083821 1 glycosylation 24174266 0 de-N-glycosylated peptides 24174266 0 peptides peptides 27515282 1 protein Fterm protein 28153461 2 position position 28153461 2 linked position 28821034 0 enzymes Fterm enzymes 27448235 3 glycoproteins Fterm glycoproteins 28953376 7 intraglycopeptide intraglycopeptide 28953376 7 glycopeptides glycopeptides 26266984 6 head 26266984 6 head 25915761 6 monosialylated 25915761 6 modified Cterm 1 gp140 25726973 2 glycoprotein PUBTATOR 5 (GP5 2814 25726973 2 glycoprotein PUBTATOR envelope glycoprotein 5 155971 24462668 4 sequence 24663085 5 attached position 27998108 12 used composites 25649385 3 motif motif 26063800 1 glycoproteins Fterm glycoproteins 26063800 1 O-glycans Fterm glycoproteins 23701219 9 used composites 27508003 13 N-glycosylated motifs 27508003 13 CONCLUSIONS motifs 25629585 3 glycopeptide glycopeptide 25629585 3 glycopeptide glycopeptide 24721094 5 JSP1 PUBTATOR JSP1 56940 25915761 8 carbohydrates Thr499 27554431 4 glycoproteins Fterm proteins 27554431 4 glycoproteins Fterm glycoproteins 29032210 1 composition position 26362834 6 origin Fterm origin 27474571 4 UCP OGER UCP (1 P25874 24415556 5 N-glycosylated Fterm proteins 25726973 1 nonglycosylated Fterm proteins 25726973 1 glycoproteins Fterm glycoproteins 28953376 3 glycosylation sites 28602514 4 cell-surface/ECM OGER ECM Q13201 28602514 4 cell-surface/ECM OGER ECM Q13201 25046106 10 NSP OGER NSP O95405 28989689 0 carrying Fterm variants 26280087 1 glycosylated peptides 29430281 1 isolated OGER SMS P52788 29430281 1 isolated OGER SMS P52788 24254641 0 glycoproteins Fterm glycoproteins 26721884 11 OS9 PUBTATOR OS9 10956 25915761 5 disialylated 25915761 5 modified threonines 26225911 1 used composites 27607237 2 glycoproteins Fterm glycoproteins 26041171 5 used composite 29108390 1 glycosylated PUBTATOR Tn-antigen, sTn 1917 29202699 8 presence Fterm strain 29202699 8 presence Fterm strain 29202699 8 presence Fterm strain 29296958 4 glycoproteins Fterm glycoproteins 29296958 4 O-glycosites O-glycosites 25124516 4 N-glycosylation region 27688023 7 found subsite 24415556 1 glycoprotein 24415556 1 glycoprotein Fterm glycoprotein 25211026 11 PrP PUBTATOR PrP 19122 25211026 11 sialylation PUBTATOR PrP 19122 25211026 11 sialylation Cterm C 19122 29156586 6 glycosylated peptides 26731606 5 leucine-rich leucine 25915761 2 O-glycosylated threonine 25124516 7 disialylated Cterm IgG 26774420 8 origin Fterm origin 28347786 2 GPs OGER GPs 25498203 0 G3977 G3983 and G3977 25498203 0 G3983 G3983 and G3977 27310468 1 sialylated Fterm protein 27118501 10 used positions 28620376 5 glycosylation PUBTATOR IgG 668542 28620376 5 Fc-glycopeptides PUBTATOR C57BL/6, CD-1 111334 Fc-glycopeptides 28620376 5 Fc-glycopeptides PUBTATOR C57BL/6, CD-1 111334 Fc-glycopeptides 28620376 5 Fc-glycopeptides PUBTATOR C57BL/6, CD-1 111334 26704999 4 possessed OGER PGP A6NDG6 24407857 3 derived Fterm chitin 28950882 6 strain Fterm strain 26337523 2 SPS-CF OGER SPS P49903 26337523 2 SPS-CF OGER SPS P49903 24407857 10 used composites 28433181 2 SPS2p PUBTATOR SPS2p 22928 26484870 4 glycoprotein Fterm glycoprotein 24057866 2 Lewis PUBTATOR Lewis( 2526 24057866 2 Lewis PUBTATOR Lewis( 2526 26088135 10 glycosylated Fterm trimers 27148706 5 proteins Fterm proteins 29558056 3 proteins Fterm proteins 26791584 2 PAL OGER PAL Q9P2V4 26791584 2 PAL OGER PAL Q9P2V4 25863346 4 O-glycosylated domain 25629585 5 glycopeptides glycopeptides 26484870 2 glycoprotein Fterm glycoprotein B 26731606 0 Glycosylation PUBTATOR SOS5 823808 26731606 0 Glycosylation PUBTATOR Fasciclin-Like Arabinogalactan-Protein 829121 28620376 6 fucosylated 29166575 2 presence OGER CGE A0A0U1RPR8 position 26280087 0 O-GlcNAc 25750913 5 glycoproteins Fterm glycoproteins 25655826 3 glycoproteins Fterm glycoproteins 25655826 3 O-glycoproteins Fterm O-glycoproteins 29253994 5 -α-IdoA2S sequence 26484870 7 glycosylation ectodomain 24310794 6 enoxaparin Fterm enoxaparin 25726973 0 glycoprotein PUBTATOR envelope glycoprotein 5 155971 24737672 5 glycoproteins Fterm glycoproteins 25629585 4 glycoproteins Fterm glycoproteins 26724686 2 protein Fterm protein 24415556 0 glycoprotein 27402833 1 glycoprotein Fterm glycoprotein 27402833 1 glycosylated PUBTATOR gp120 3700 27402833 1 bears PUBTATOR gp120 3700 24310794 0 pro- pro 29156586 10 glycopeptides glycopeptides 25629585 2 glycopeptide glycopeptide 25589358 5 glycoproteins Fterm glycoproteins 25915761 3 glycosylated threonine 25629585 8 glycopeptides glycopeptides 25629585 8 glycopeptides glycopeptides 25629585 8 glycoprotein Fterm glycoprotein 25629585 8 5-glycoprotein Fterm 5-glycoprotein 27845783 0 glycopeptide glycopeptide 25211026 2 N-glycosylation sites 25211026 2 sialoglycoprotein Fterm sialoglycoprotein 19122 25211026 2 sialoglycoprotein PUBTATOR Pr(PC 19122 25505137 2 heterogeneity 25498203 5 α-D-Glcp Fterm strain 25211026 9 PrP PUBTATOR PrP 19122 25211026 9 de-sialylation Cterm C 19122 25211026 9 de-sialylation PUBTATOR PrP 19122 28950882 1 poly-γ-glutamic glutamic acid 25421533 6 contained OGER EPA P01033 28620376 3 Fc-glycosylation PUBTATOR IgG 668542 27449907 2 glycosylated fragments 28821034 1 enzymes Fterm enzymes 28807689 3 AVP PUBTATOR AVP 551 28807689 3 AVP PUBTATOR AVP 551 24737672 6 glycoproteins Fterm glycoproteins 28655919 6 used composites 27302279 0 Glycosylation PUBTATOR IgG 16059 25211026 14 sialidase OGER lysosomal sialidase Q99519 25211026 14 PrP PUBTATOR PrP 19122 25211026 14 sialylation Cterm C 19122 25211026 14 sialylation PUBTATOR PrP 19122 25211026 14 PrP PUBTATOR PrP 19122 25211026 14 desialylation PUBTATOR PrP 19122 25211026 14 desialylation Cterm C 19122 25211026 14 lysosomal OGER lysosomal sialidase Q99519 28620376 0 N-Glycosylation PUBTATOR Mouse Immunoglobulin G 668542 28620376 0 N-Glycosylation PUBTATOR IgG 668542 24793172 1 used composites 27508003 7 N-glycosylation sites 28708979 10 glycan position 29556562 6 N-glycosylation sites 27402833 4 units arms 26359989 3 glycosylated PUBTATOR Env trimer 100616444 26454110 1 GPS OGER GPS 25677379 1 glycoproteins Fterm glycoproteins 27259648 1 IPS-1 OGER IPS-1 Q9NPH2 24415556 6 proteins Fterm proteins 25655826 4 O-glycosylation sites 26109728 14 glycoprotein PUBTATOR envelope glycoprotein 100616444