doc_id	sent_index	relation_id	relation	trigger	trigger_offset	arg_num	arg_base_np	arg_protein	arg_domain	arg_site	arg_sugar	PSource	SiteSource	NProtein	NID	SiteName	sent_text
35475171	1	4	part_of	S	239:239	arg1	the S receptor-binding domain	S		the S receptor-binding domain		Cterm	Site	S	43740568	domain	The SARS-CoV-2 Omicron (B.1.1.529) variant possesses numerous spike (S) mutations particularly in the S receptor-binding domain (S-RBD) that significantly improve transmissibility and evasion of neutralizing antibodies.
37363916	4	19	gly	glycosylated	723:734	arg1	multi-fucosylated proteins	multi-fucosylated proteins				Fterm		proteins			The high MW fractions were rich in heavily glycosylated molecules, including multi-fucosylated proteins.
37363916	4	84	gly	multi-fucosylated	757:773	arg1	multi-fucosylated proteins	multi-fucosylated proteins				Fterm		proteins			The high MW fractions were rich in heavily glycosylated molecules, including multi-fucosylated proteins.
37358033	5	47	part_of	iron-porphyrin-MOF-based	792:815	arg1	an integrated iron-porphyrin-MOF-based nanozyme composite	MOF		an integrated iron-porphyrin-MOF-based nanozyme composite		OGER	Site	MOF	Q9H7Z6	composite	Here, an integrated iron-porphyrin-MOF-based nanozyme composite named HA@GOx@PCN-224(Fe) (HGPF) was precisely designed and constructed.
35303273	6	72	part_of	NCs	1397:1399	arg1	The final composition	NCs		The final composition		OGER	Site	NCs		position	The final composition of the isolated NCs was found to strongly depend on their composition and preparation technique.
35327586	5	98	gly	protein	919:925	arg1	sulfated glycosaminoglycans	protein			sulfated glycosaminoglycans	Fterm		protein			A quantification of the amount of DNA, protein, and sulfated glycosaminoglycans (sGAGs) was carried out to determine the efficiency of the extraction in relation to standard decellularization methodologies.
35327586	5	110	gly	DNA	914:916	arg1	sulfated glycosaminoglycans	DNA			sulfated glycosaminoglycans	Cterm		DNA			A quantification of the amount of DNA, protein, and sulfated glycosaminoglycans (sGAGs) was carried out to determine the efficiency of the extraction in relation to standard decellularization methodologies.
35608970	6	125	part_of	recA	972:975	arg1	relatively low (91.6-95.7 %) pheS	recA		relatively low (91.6-95.7 %) pheS		OGER	AminoAcid	recA	Q06609	pheS	Strain S053-2T had relatively low (91.6-95.7 %) pheS, atpA, clpC, dnaG, fusA, glnA, glyS, hsp60, argS, pyrG and recA sequence similarities to the type strain of B. asteroides.
35572846	12	121	gly	glycoprotein/glycopeptide	1855:1879	arg2	the intact glycoprotein/glycopeptide approach			the intact glycoprotein/glycopeptide approach						glycoprotein/glycopeptide	The findings of the study highlight the efficiency of the release glycan method in providing a correct measure of the total palivizumab glycan pool compared to the intact glycoprotein/glycopeptide approach.
35545925	3	82	gly	integral	408:415	arg1	Peptidoglycan	l			Peptidoglycan	PUBTATOR		l	21832		Peptidoglycan (PG) is an integral component of P. aeruginosa cells that is essential to its survival and a target for antimicrobials.
34999048	4	17	gly	used	736:739	arg2	the as-prepared COFs-AgNPs composite			the as-prepared COFs-AgNPs composite						composite	Furthermore, the as-prepared COFs-AgNPs composite was further used to fabricate CS composite films (CS/COFs-AgNPs) by a solution casting method.
35327586	11	55	part_of	ECM	1964:1966	arg1	ECM composition	ECM		ECM composition		OGER	Site	ECM	Q13201	position,	Furthermore, rheological analysis indicated an increase in viscosity with increasing ECM composition, an effect even more prominent in samples containing aECM.
36174859	6	11	part_of	lignin	951:956	arg1	lignin composition	lignin		lignin composition		Fterm	Site	lignin		position	Moreover, it was demonstrated that lignin composition was the key factor to affect the composition dissolution.
37146305	4	68	gly	%	1011:1011	arg1	O-linked intact glycopeptides			O-linked intact glycopeptides						glycopeptides	By fine-tuning the experimental conditions, we demonstrated that this platform allowed the selective separation of N- and O-linked intact glycopeptides into two fractions, with 85.1% O-linked intact glycopeptides presented in the first fraction and 93.4% N-linked intact glycopeptides presented in the second fraction.
37146305	4	72	gly	glycopeptides	968:980	arg2	O-linked intact glycopeptides			O-linked intact glycopeptides						glycopeptides	By fine-tuning the experimental conditions, we demonstrated that this platform allowed the selective separation of N- and O-linked intact glycopeptides into two fractions, with 85.1% O-linked intact glycopeptides presented in the first fraction and 93.4% N-linked intact glycopeptides presented in the second fraction.
37146305	4	76	gly	glycopeptides	1101:1113	arg2	85.1% O-linked intact glycopeptides presented in the first fraction and 93.4% N-linked intact glycopeptides			85.1% O-linked intact glycopeptides presented in the first fraction and 93.4% N-linked intact glycopeptides						glycopeptides	By fine-tuning the experimental conditions, we demonstrated that this platform allowed the selective separation of N- and O-linked intact glycopeptides into two fractions, with 85.1% O-linked intact glycopeptides presented in the first fraction and 93.4% N-linked intact glycopeptides presented in the second fraction.
37146305	4	85	gly	glycopeptides	1029:1041	arg2	O-linked intact glycopeptides			O-linked intact glycopeptides						glycopeptides	By fine-tuning the experimental conditions, we demonstrated that this platform allowed the selective separation of N- and O-linked intact glycopeptides into two fractions, with 85.1% O-linked intact glycopeptides presented in the first fraction and 93.4% N-linked intact glycopeptides presented in the second fraction.
36551250	8	29	part_of	neurotoxin	1202:1211	arg1	K1134	neurotoxin		residues Y1132, Q1133 and K1134		Fterm	SpecificSite	neurotoxin		residues Y1132, Q1133 and K1134	We attributed this incapability to a barrage effect exerted by neurotoxin residues Y1132, Q1133 and K1134, which prevent formation of long-lasting intermolecular hydrogen bonds.
36551250	8	29	part_of	neurotoxin	1202:1211	arg1	neurotoxin residues Y1132, Q1133 and K1134	neurotoxin		residues Y1132, Q1133 and K1134		Fterm	SpecificSite	neurotoxin		residues Y1132, Q1133 and K1134	We attributed this incapability to a barrage effect exerted by neurotoxin residues Y1132, Q1133 and K1134, which prevent formation of long-lasting intermolecular hydrogen bonds.
36551250	8	29	part_of	neurotoxin	1202:1211	arg1	Q1133	neurotoxin		residues Y1132, Q1133 and K1134		Fterm	SpecificSite	neurotoxin		residues Y1132, Q1133 and K1134	We attributed this incapability to a barrage effect exerted by neurotoxin residues Y1132, Q1133 and K1134, which prevent formation of long-lasting intermolecular hydrogen bonds.
36551250	8	29	part_of	neurotoxin	1202:1211	arg1	neurotoxin residues Y1132, Q1133 and K1134	neurotoxin		residues Y1132, Q1133 and K1134		Fterm	SpecificSite	neurotoxin		residues Y1132, Q1133 and K1134	We attributed this incapability to a barrage effect exerted by neurotoxin residues Y1132, Q1133 and K1134, which prevent formation of long-lasting intermolecular hydrogen bonds.
36551250	8	29	part_of	neurotoxin	1202:1211	arg1	Q1133	neurotoxin		residues Y1132, Q1133 and K1134		Fterm	SpecificSite	neurotoxin		residues Y1132, Q1133 and K1134	We attributed this incapability to a barrage effect exerted by neurotoxin residues Y1132, Q1133 and K1134, which prevent formation of long-lasting intermolecular hydrogen bonds.
36551250	8	29	part_of	neurotoxin	1202:1211	arg1	Q1133	neurotoxin		residues Y1132, Q1133 and K1134		Fterm	SpecificSite	neurotoxin		residues Y1132, Q1133 and K1134	We attributed this incapability to a barrage effect exerted by neurotoxin residues Y1132, Q1133 and K1134, which prevent formation of long-lasting intermolecular hydrogen bonds.
36813813	4	31	gly	glycoproteins	551:563	arg1	the glycoproteins	the glycoproteins				Fterm		glycoproteins			Results indicate that the chiral semiconductor CNTs clearly response to the presence of the glycoproteins by changing the electronic band gaps and electron density of states (DOS).
35428308	16	121	part_of	protein	2298:2304	arg1	the protein sequence	protein		the protein sequence		Fterm	Site	protein		sequence	Multiple sequence alignment and homology modeling of the protein sequence revealed that the gene product belonged to the GH11 family, indicating its possible application in bioconversion.
36436864	4	2	part_of	CS	554:555	arg1	The chemical composition	CS		The chemical composition		PUBTATOR	Site	CS	170587	position	The chemical composition of CS before and after degradation were compared by FT-IR, NMR, etc., and no removement of sulfate group was observed.
35927436	5	49	part_of	sites	695:699	arg1	the receptor-binding GP1 subunit	GP1 subunit		sites		PUBTATOR	Site	GP1 subunit	9567	sites	We detect up to 16 unique O-linked glycosylation sites in the MLD, and two O-linked sites in the receptor-binding GP1 subunit.
35927436	5	49	part_of	sites	695:699	arg1	the MLD	MLD		sites		OGER	Site	MLD	O15121	sites	We detect up to 16 unique O-linked glycosylation sites in the MLD, and two O-linked sites in the receptor-binding GP1 subunit.
35927436	5	83	part_of	sites	660:664	arg1	the receptor-binding GP1 subunit	GP1 subunit		sites		PUBTATOR	Site	GP1 subunit	9567	sites	We detect up to 16 unique O-linked glycosylation sites in the MLD, and two O-linked sites in the receptor-binding GP1 subunit.
35927436	5	83	part_of	sites	660:664	arg1	the MLD	MLD		sites		OGER	Site	MLD	O15121	sites	We detect up to 16 unique O-linked glycosylation sites in the MLD, and two O-linked sites in the receptor-binding GP1 subunit.
36813813	1	11	gly	glycoproteins	221:233	arg1	N-linked and O-linked SARS-CoV-2 spike glycoproteins	N-linked and O-linked SARS-CoV-2 spike glycoproteins				PUBTATOR		spike glycoproteins	None		We investigate the electronic response of single-walled carbon nanotubes (SWCNTs) and a carbon nanobelt (CNB) to N-linked and O-linked SARS-CoV-2 spike glycoproteins, using ab initio quantum mechanical approach.
35475171	5	20	gly	O-glycosite	973:983	arg2	Thr376			Thr376						Thr376	A novel O-glycosite (Thr376) unique to the Omicron variant is identified.
35475171	5	20	gly	O-glycosite	973:983	arg2	A novel O-glycosite			A novel O-glycosite						O-glycosite	A novel O-glycosite (Thr376) unique to the Omicron variant is identified.
36968141	9	2	part_of	mesothelin	1329:1338	arg1	the C-terminal shedding-resistant fragment	mesothelin		the C-terminal shedding-resistant fragment		OGER	Site	mesothelin	Q61468	fragment	The structure of the C-terminal shedding-resistant fragment of mesothelin complexed with a mAb 15B6 displays an extended linear epitope and helps explain the protection afforded by the antibody for the shedding sites.
37365335	0	53	gly	glycosylated	62:73	arg1	glycosylated enzymes	glycosylated enzymes				Fterm		enzymes			Tandem intermolecular [4 + 2] cycloadditions are catalysed by glycosylated enzymes for natural product biosynthesis.
35153010	4	35	gly	M-N-2-HACC/N-CMCS	735:751	arg1	mannose-modified thiolated chitosan NPs	M-N-2-HACC/N-CMCS NPs			mannose-modified thiolated chitosan NPs	OGER		M-N-2-HACC/N-CMCS NPs	P0C0P6		The electrostatic interaction between the two substances was used to produce mannose-modified thiolated chitosan NPs (M-N-2-HACC/N-CMCS NPs).
37305414	5	25	gly	domain	828:833	arg1	a peptidoglycan-binding motif			domain	a peptidoglycan-binding motif					domain	In silico analysis revealed a peptidoglycan-binding motif at the periplasmic C-terminal domain (CTD) of P5.
35927436	1	59	gly	glycoprotein	71:82	arg1	The envelope glycoprotein GP	The envelope glycoprotein GP				PUBTATOR		envelope glycoprotein GP	100616444		The envelope glycoprotein GP of the ebolaviruses is essential for host cell entry and the primary target of the host antibody response.
35166992	7	58	gly	contained	1142:1150	arg1	α1-2 AND D-Rha	α1-2			D-Rha	PUBTATOR		1-2	28887		WbpX synthesized several products that contained D-Rha in both α1-2 and α1-3 linkages.
35797143	11	59	part_of	CS/ZnO-HSP	1750:1759	arg1	the CS/ZnO-HSP nanocomposites	CS		the CS/ZnO-HSP nanocomposites		PUBTATOR	Site	CS	1431	nanocomposites	Thus, it was determined that the CS/ZnO-HSP nanocomposites did not have any cytotoxicity in healthy human cells.
36433128	0	38	gly	Composites	20:29	arg1	Polysaccharides			Composites	Polysaccharides					Composites	Bacterial Cellulose Composites with Polysaccharides Filled with Nanosized Cerium Oxide: Characterization and Cytocompatibility Assessment.
36968141	6	49	gly	N-glycosylation	835:849	arg2	all three predicted N-glycosylation sites			all three predicted N-glycosylation sites						sites	Glycan attachments have been identified in the structure for all three predicted N-glycosylation sites and confirmed with samples from cell culture and patient ascites.
35104515	5	50	part_of	CS	718:719	arg1	new MXene@Fe3O4@CS composites	CS		new MXene@Fe3O4@CS composites		PUBTATOR	Site	CS	1431	composites	MXene can provide suitable support for both CS and Fe3O4 to construct new MXene@Fe3O4@CS composites.
35475171	0	61	gly	Variant	71:77	arg1	Distinct Core Glycan	Variant Spike			Distinct Core Glycan	PUBTATOR		Variant Spike	43740568		Distinct Core Glycan and O-Glycoform Utilization of SARS-CoV-2 Omicron Variant Spike Protein RBD Revealed by Top-Down Mass Spectrometry.
35677250	9	51	gly	glycoproteins	1474:1486	arg1	glycoproteins	glycoproteins				Fterm		glycoproteins			Plant cell walls are primarily made up of cellulose, hemicellulose, lignin, pectin, and glycoproteins.
35475171	6	69	gly	heterogeneity	1164:1176	arg1	the three variants	the three variants				Fterm		variants			Moreover, we have directly quantified the Core 1 and Core 2 O-glycan structures and characterized the O-glycoform structural heterogeneity of the three variants.
35026221	0	29	part_of	chitosan-kaolin	49:63	arg1	tripolyphosphate-crosslinked chitosan-kaolin composite	kaolin		tripolyphosphate-crosslinked chitosan-kaolin composite		Fterm	Site	kaolin		composite	Epichlorohydrin and tripolyphosphate-crosslinked chitosan-kaolin composite for Auramine O dye removal from aqueous solutions: Experimental study and DFT calculations.
37365335	6	49	gly	N-glycan	843:850	arg1	PycR1	PycR1			N-glycan	OGER		PycR1	P32322		The N-glycan at N211 in PycR1 significantly increases the affinity to the calcium ion, which in turn regulates the active cavity, making it specifically interact with substrates to accelerate the tandem [4 + 2] cycloaddition.
35795888	8	48	part_of	ADA-GEL/Lys-Ce-MSN	1437:1454	arg1	ADA-GEL/Lys-Ce-MSN nanocomposite	MSN		ADA-GEL/Lys-Ce-MSN nanocomposite		OGER	Site	MSN	P26038	nanocomposite	Taken together, ADA-GEL/Lys-Ce-MSN nanocomposite holds great promise for 3D printing of multifunctional hydrogel bone tissue engineering (BTE) scaffolds, able to induce bone regeneration, address infection, and potentially inhibit tumor formation and growth.
36124906	1	59	gly	used	337:340	arg2	A 1,10-phenanthroline-Fe<sub>3</sub>O<sub>4</sub> nanoparticles-graphene oxide-chitosan nanocomposite			A 1,10-phenanthroline-Fe<sub>3</sub>O<sub>4</sub> nanoparticles-graphene oxide-chitosan nanocomposite						nanocomposite	A 1,10-phenanthroline-Fe<sub>3</sub>O<sub>4</sub> nanoparticles-graphene oxide-chitosan nanocomposite (Phen-Fe<sub>3</sub>O<sub>4</sub> NPs-GO-Chi) was fabricated and used to modify a glassy carbon (GC) electrode.
35104013	6	30	part_of	Fab	936:938	arg1	Fab fragments	Fab		Fab fragments		PUBTATOR	Site	Fab	2187	fragments	ELISA binding data obtained with the β-anomeric hepta- and nonamannosyl conjugates with a selection of HIV-1 bnAbs showed comparable binding of both mannosyl ligands by Fab fragments yet lesser binding of the nonasaccharide conjugate by the corresponding IgG antibodies.
36657855	5	40	part_of	TCNPs	882:886	arg1	The TCNPs@GRP composite	TCNPs@GRP		The TCNPs@GRP composite		OGER	Site	TCNPs@GRP	Q3ZCW2	composite	The TCNPs@GRP composite attained MIC values of 0.98, 3.9, and 7.81 μg/mL for inhibiting the growth of sensitive, MDR, and XDR M. tuberculosis pathogens compared to the bare TCNPs (7.81, 31.25, >125 μg/mL) and the isoniazid drug (0.24, 0, 0 μg/mL), respectively.
36657855	5	64	part_of	GRP	888:890	arg1	The TCNPs@GRP composite	TCNPs@GRP		The TCNPs@GRP composite		OGER	Site	TCNPs@GRP	Q3ZCW2	composite	The TCNPs@GRP composite attained MIC values of 0.98, 3.9, and 7.81 μg/mL for inhibiting the growth of sensitive, MDR, and XDR M. tuberculosis pathogens compared to the bare TCNPs (7.81, 31.25, >125 μg/mL) and the isoniazid drug (0.24, 0, 0 μg/mL), respectively.
36657855	5	68	part_of	@	887:887	arg1	The TCNPs@GRP composite	TCNPs@GRP		The TCNPs@GRP composite		OGER	Site	TCNPs@GRP	Q3ZCW2	composite	The TCNPs@GRP composite attained MIC values of 0.98, 3.9, and 7.81 μg/mL for inhibiting the growth of sensitive, MDR, and XDR M. tuberculosis pathogens compared to the bare TCNPs (7.81, 31.25, >125 μg/mL) and the isoniazid drug (0.24, 0, 0 μg/mL), respectively.
35714619	4	65	part_of	ECM	676:678	arg1	The ECM composition	ECM		The ECM composition		OGER	Site	ECM	Q13201	position,	The ECM composition, mechanical property, and cytocompatibility are evaluated and compared with other decellularization methods.
37365335	3	12	gly	glycosylated	426:437	arg1	two calcium-ion-dependent glycosylated enzymes	two calcium-ion-dependent glycosylated enzymes				Fterm		enzymes			Here we demonstrate that two calcium-ion-dependent glycosylated enzymes, EupfF and PycR1, independently catalyse sequential, intermolecular Diels-Alder reactions in the biosynthesis of bistropolone-sesquiterpenes.
37365335	3	12	gly	glycosylated	426:437	arg1	PycR1	PycR1				OGER		PycR1	P32322		Here we demonstrate that two calcium-ion-dependent glycosylated enzymes, EupfF and PycR1, independently catalyse sequential, intermolecular Diels-Alder reactions in the biosynthesis of bistropolone-sesquiterpenes.
36577473	7	24	part_of	NaCMC-cl-DMAA/AAc-BNNSs	852:874	arg1	NaCMC-cl-DMAA/AAc-BNNSs hydrogel composite	AAc		NaCMC-cl-DMAA/AAc-BNNSs hydrogel composite		OGER	Site	AAc	Q6IB77	composite	Whereas drug release rate for NaCMC-cl-DMAA/AAc-BNNSs hydrogel composite was 78.6 % at pH = 2.2 and 97.3 % at pH = 7.4 within 4320 min.
36364023	11	89	gly	asparagine	2011:2020	arg1	Glucose and asparagine content			asparagine	Glucose and asparagine content					asparagine	Glucose and asparagine content of uninfected hulls was influenced by the nitrogen and water treatments provided to the trees, being higher in the high-nitrogen and water treatments.
36365536	4	11	part_of	albumin	665:671	arg1	albumin deposition	albumin		albumin deposition		PUBTATOR	Site	albumin	280717	position	In addition, polysaccharides could also reduce albumin deposition over time.
35927436	2	34	gly	glycans	269:275	arg1	its disordered mucin-like domain			its disordered mucin-like domain	its disordered mucin-like domain		Site			domain	GP is heavily glycosylated with up to 17 N-linked sites, numerous O-linked glycans in its disordered mucin-like domain (MLD), and three predicted C-linked mannosylation sites.
35927436	2	34	gly	glycans	269:275	arg1	MLD	MLD			glycans	OGER		MLD	O15121		GP is heavily glycosylated with up to 17 N-linked sites, numerous O-linked glycans in its disordered mucin-like domain (MLD), and three predicted C-linked mannosylation sites.
35412807	7	43	part_of	SARS-CoV-2	988:997	arg1	the SARS-CoV-2 receptor-binding domain	SARS		the SARS-CoV-2 receptor-binding domain		OGER	Site	SARS	P49591	domain	We further modified the S. aureus PGN microparticle to contain the SARS-CoV-2 receptor-binding domain (RBD)─this conjugate vaccine elicited neutralizing antibody titers comparable to those elicited by the KLH-conjugated RBD.
35485965	1	102	part_of	composition	293:303	arg1	α-amylase and α-glucosidase enzymes	enzymes		composition		Fterm	Site	enzymes		position	This study analyzed the effects of functional cereals processed and produced from yellow corn, soybean, acha, orange peels and moringa leaves' polyphenolic content, glycemic index, starch composition and their effects on α-amylase and α-glucosidase enzymes in vitro.
35763923	1	33	part_of	curcumin	232:239	arg1	curcumin (Cur) composites	curcumin		curcumin (Cur) composites		Fterm	Site	curcumin		composites	In this study, glycated soy β-conglycinin (β-CG) stabilized curcumin (Cur) composites were fabricated by a unique reversible self-assembly character of β-conglycinin-dextran conjugates (β-CG-DEX).
35568899	11	80	gly	N-glycosylation	1759:1773	arg1	Xyl40			domain	Xyl40					domain	N-glycosylation of the catalytic domain of Xyl40 increased the lignin tolerance of the enzyme.
37230566	3	37	gly	used	720:723	arg2	Lineal peptides			Lineal peptides						peptides	Lineal peptides (LPs), extraction of the spleen of healthy pigs or calves, were used as cases.
35726720	5	27	gly	SOX9	1134:1137	arg1	sulfated glycosaminoglycan (sGAG) deposition	SOX9			sulfated glycosaminoglycan (sGAG) deposition	PUBTATOR		SOX9	6662		The COL + SF(S) hydrogel exhibited superior stability during cell culture and promoted the gene expression of SOX9 at the early stage and sulfated glycosaminoglycan (sGAG) deposition without any exogenous growth factor.
36080450	7	61	part_of	CNC	1405:1407	arg1	CNC positions	CNC		CNC positions		OGER	Site	CNC	P32418	positions	Furthermore, the nucleating effect and local pinning of the crystallites to the substrate near CNC positions enhanced the film stability.
35131354	10	71	gly	inhomogeneity	1506:1518	arg1	HME-filament	HME-filament				OGER		HME	P39900		The effect of high HME screw speed (100 rpm) resulted in inhomogeneity of HME-filament, which resulted in inconsistency of the printer nozzle extrudate and printed layers.
36906372	11	8	part_of	BC/PTL/Cu	1671:1679	arg1	BC/PTL/Cu composites	BC/PTL		BC/PTL/Cu composites		OGER	Site	BC/PTL	P16233	composites	Collectively, these results demonstrate that BC/PTL/Cu composites are promising dressings for healing infected wounds.
36257763	2	57	gly	used	328:331	arg2	composite			composite						composite	The composite was used as the sorbent for fully automated dispersive pipette extraction (DPX), after introducing CMs as the support, the loss of MIL-88B(Fe) in DPX was avoided.
36372507	1	30	part_of	NPs	286:288	arg1	the composition	Fe3O4 NPs		the composition		OGER	Site	Fe3O4 NPs	P0C0P6	position	This work represents a biocompatible magnetic nanobiocomposite prepared by the composition of chitosan (CS) hydrogel, silk fibroin (SF), graphene oxide (GO), and Fe3O4 NPs.
36551250	9	45	gly	glycoprotein	1491:1502	arg1	its glycoprotein receptor	its glycoprotein receptor				Fterm		glycoprotein			We also provided structural elements that suggest that BoNT/F1 uses the strategy of BoNT/A1 combined with the strategy of botulinum neurotoxin type E to bind N-glycan of its glycoprotein receptor.
36551250	9	52	gly	receptor	1504:1511	arg1	N-glycan	receptor			N-glycan	Fterm		receptor			We also provided structural elements that suggest that BoNT/F1 uses the strategy of BoNT/A1 combined with the strategy of botulinum neurotoxin type E to bind N-glycan of its glycoprotein receptor.
35270006	6	8	gly	sialylated	795:804	arg1	several fucosylated and sialylated HMOs	several fucosylated and sialylated HMOs				OGER		HMOs	P00540		Relative abundance of human milk bacterial taxa were significantly associated with concentrations of several fucosylated and sialylated HMOs.
35270006	6	56	gly	fucosylated	779:789	arg1	several fucosylated and sialylated HMOs	several fucosylated and sialylated HMOs				OGER		HMOs	P00540		Relative abundance of human milk bacterial taxa were significantly associated with concentrations of several fucosylated and sialylated HMOs.
35712026	10	64	part_of	sites	1630:1634	arg1	the membrane-bound receptor	receptor		sites		Fterm	Site	receptor		sites	Occupancy was likewise high for the membrane-bound receptor at all detected N-glycosylation sites using CD16a purified from cultured human natural killer cells.
36347864	1	11	gly	used	250:253	arg2	the magnetic NH2-MIL-101(Al)/chitosan nanocomposite			the magnetic NH2-MIL-101(Al)/chitosan nanocomposite						nanocomposite	In the present study, the magnetic NH2-MIL-101(Al)/chitosan nanocomposite (MIL/Cs@Fe3O4 NCs) was synthesized and used in the removal of azithromycin (AZT) from an aqueous solution for the first time.
36001029	4	28	part_of	ECM	601:603	arg1	bioactive composition	ECM		bioactive composition		OGER	Site	ECM	Q13201	position	Inspired by the structure and bioactive composition of ECM, hyaluronic acid (HA) was used as a bio-glue to regulate SNF assembly.
37268075	3	35	part_of	CS/PVA-La-Zr	564:575	arg1	the CS/PVA-La-Zr composite	PVA		the CS/PVA-La-Zr composite		OGER	Site	PVA	P32926	composite	The fluoride adsorption behavior of the CS/PVA-La-Zr composite can be described by pseudo-second-order kinetics and Langmuir isotherms models.
36095317	8	6	part_of	fragments	1638:1646	arg1	SDS-CGE	CGE		fragments		OGER	Site	CGE	Q02846	fragments	We suggest that the observed fronting and/or tailing peak shapes of the monoclonal antibody fragments in SDS-CGE at increasing boric acid concentrations can be considered as the result of multiple effects including changes in pH, sieving matrix pore size, viscosity, and the mobility variation of the co-ionic borate adducts with the gel-buffer ingredients.
35714730	4	9	part_of	HDL	559:561	arg1	HDL composition	HDL		HDL composition		OGER	Site	HDL	Q9R187	position	To investigate this, we evaluated HDL composition and function in obese LDL receptor (Ldlr-/-) mice that were losing weight because of 10,12 CLA supplementation or caloric restriction (CR; weight-matched control group) and in an obese control group consuming a high-fat high-sucrose diet.
36801785	5	37	part_of	PVA/Alg	810:816	arg1	polyvinyl alcohol/alginate (PVA/Alg) composite	PVA		polyvinyl alcohol/alginate (PVA/Alg) composite		OGER	Site	PVA	P32926	composite	In this study, innovative hybrid scaffolds of polyvinyl alcohol/alginate (PVA/Alg) composite loaded with various concentrations of green palladium nanoparticles (Pd NPs) have been synthesized.
36724608	5	23	gly	proteins	777:784	arg1	carbohydrates	proteins			carbohydrates	Fterm		proteins			Our results showed large amounts of valuable nutrients, such as carbohydrates, of which approximately 47.06 % and 29.11 % consist of fibers and starch respectively and significant amounts of proteins (20.47 to 25.56 g/100 g fw) and ashes.
35604178	5	21	gly	glycopeptide	1047:1058	arg2	the functional glycopeptide			the functional glycopeptide						glycopeptide	It has been demonstrated that the functional glycopeptide performed as an extracellular cryoprotectant accompanied by high intracellular trehalose for synergistic cryopreservation of human erythrocytes in the biocompatible glycerol-free conditions.
36813813	3	21	gly	glycoproteins	444:456	arg1	glycoproteins	glycoproteins				Fterm		glycoproteins			We examine the effect of carbon nanotube (CNT) chirality on the interaction between CNTs and glycoproteins.
37358033	8	65	part_of	iron-porphyrin	1300:1313	arg1	iron-porphyrin active sites	iron-porphyrin		iron-porphyrin active sites		Fterm	Site	iron-porphyrin		sites	Afterwards, inspired by heme analogs, H2O2 was catalyzed by iron-porphyrin active sites of the HGPF nanozyme to generate hydroxyl radicals (˙OH).
35074101	6	5	part_of	BC/HAp	988:993	arg1	the BC/HAp composite	HAp		the BC/HAp composite		OGER	Site	HAp	Q15424	composite	By this means, we significantly improved the mechanical properties and biocompatibility of the BC/HAp composite, as well as simplified the preparation process, compared to conventional method, which, therefore, suggests, it could be further studied for biomedical applications such as bone tissue engineering.
36099110	5	17	part_of	ECM	744:746	arg1	ECM composition	ECM		ECM composition		OGER	Site	ECM	Q13201	position	ECM composition of hyaluronic acid (HA) and collagen in the subglottic area (SA) was also evaluated.
36551250	3	23	gly	glycoprotein	504:515	arg1	glycosylated human synaptic vesicle glycoprotein A	glycosylated human synaptic vesicle glycoprotein A				Cterm		glycosylated human synaptic vesicle glycoprotein A (hSV2Ag	9900		However, little is known about the molecular mechanisms that control binding of botulinum neurotoxin type F1 (BoNT/F1) to its membrane receptor, glycosylated human synaptic vesicle glycoprotein A (hSV2Ag).
36551250	3	54	gly	glycosylated	468:479	arg1	its membrane receptor	its membrane receptor				Fterm		receptor			However, little is known about the molecular mechanisms that control binding of botulinum neurotoxin type F1 (BoNT/F1) to its membrane receptor, glycosylated human synaptic vesicle glycoprotein A (hSV2Ag).
36551250	3	54	gly	glycosylated	468:479	arg1	glycosylated human synaptic vesicle glycoprotein A	glycosylated human synaptic vesicle glycoprotein A (hSV2Ag				Cterm		glycosylated human synaptic vesicle glycoprotein A (hSV2Ag	9900		However, little is known about the molecular mechanisms that control binding of botulinum neurotoxin type F1 (BoNT/F1) to its membrane receptor, glycosylated human synaptic vesicle glycoprotein A (hSV2Ag).
35604178	4	46	gly	glycopeptide	988:999	arg2	the glycopeptide			the glycopeptide						glycopeptide	Intracellular trehalose could reach 94.2 ± 12.1 mM with slight impacts on morphology and cell functions, and the post-storage cryosurvival of human erythrocytes could achieve 96.2 ± 3.4% via membrane protection by the glycopeptide.
35545925	4	38	part_of	global	539:544	arg1	the global PG composition	l PG		the global PG composition		PUBTATOR	Site	l PG	21832	position	Here, we examined the global PG composition of two P. aeruginosa epidemic strains, LESB58 and LESlike1, and compared them to the common laboratory strains PAO1 and PA14.
35545925	4	91	part_of	PG	546:547	arg1	the global PG composition	l PG		the global PG composition		PUBTATOR	Site	l PG	21832	position	Here, we examined the global PG composition of two P. aeruginosa epidemic strains, LESB58 and LESlike1, and compared them to the common laboratory strains PAO1 and PA14.
36328080	7	80	part_of	residues	1140:1147	arg1	SDS	SDS		residues		OGER	AminoAcid	SDS		histidine residues	Slower solvent exchange and higher pKas of the histidine residues in SDS than in DPC suggest that Of-Pis1 interacts more tightly with SDS.
36306917	1	73	part_of	La-CTS-ATP	176:185	arg1	A novel lanthanum-modified-chitosan-attapulgite (La-CTS-ATP) composite	CTS		A novel lanthanum-modified-chitosan-attapulgite (La-CTS-ATP) composite		PUBTATOR	Site	CTS	7276	composite	A novel lanthanum-modified-chitosan-attapulgite (La-CTS-ATP) composite with efficient adsorption of phosphate in water was prepared and characterized.
35714730	0	91	part_of	HDL	56:58	arg1	HDL composition	HDL		HDL composition		OGER	Site	HDL	Q9R187	position	10,12-Conjugated linoleic acid supplementation improves HDL composition and function in mice.
35712026	7	65	gly	occupancy	1098:1106	arg2	the extracellular domains			the extracellular domains						domains	Here we quantify occupancy of the extracellular domains using complementary mass spectrometry-based methods.
36587550	5	36	part_of	protein	1237:1243	arg1	the amino acid composition	protein		the amino acid composition		Fterm	Site	protein		position	SSF improved the free and hydrolyzed amino acid profiles of FCW, increased the content of flavor amino acids, and improved the amino acid composition of FCW protein.
35545925	11	80	part_of	global	2031:2036	arg1	the global composition	l		the global composition		PUBTATOR	Site	l	21832	position	IMPORTANCE Using peptidoglycomics to examine the global composition of the peptidoglycan (PG) allows insights into the enzymatic activity that functions on this important biopolymer.
37146305	7	62	gly	glycopeptides	1801:1813	arg2	N-/O-linked intact glycopeptides			N-/O-linked intact glycopeptides						glycopeptides	In summary, this integrated platform opened a potentially useful avenue for the global analysis of protein glycosylation and can serve as a useful tool for the characterization of N-/O-linked intact glycopeptides at the proteomics scale.
35746260	1	67	part_of	CuNPs-CSF-CNPs-MWCNTs	404:424	arg1	a novel copper nanoparticles-chitosan film-carbon nanoparticles-multiwalled carbon nanotubes (CuNPs-CSF-CNPs-MWCNTs) composite	CSF		a novel copper nanoparticles-chitosan film-carbon nanoparticles-multiwalled carbon nanotubes (CuNPs-CSF-CNPs-MWCNTs) composite		OGER	Site	CSF		composite	A sensitive simultaneous electroanalysis of phytohormones indole-3-acetic acid (IAA) and salicylic acid (SA) based on a novel copper nanoparticles-chitosan film-carbon nanoparticles-multiwalled carbon nanotubes (CuNPs-CSF-CNPs-MWCNTs) composite was reported.
36551250	10	6	gly	glycoprotein	1736:1747	arg1	synaptic vesicle glycoprotein	synaptic vesicle glycoprotein				Fterm		glycoprotein			Overall, our study opened a gate for design of a universal inhibitor aimed at disrupting N-glycan-toxin interactions and for bioengineering of a BoNT/F1 protein that may be able to bind protein content of synaptic vesicle glycoprotein for therapeutic purposes.
37006776	3	13	gly	sialylated	400:409	arg1	sialylated branched N-glycans				sialylated branched N-glycans						In this context, recent H3N2 viruses have specificity for α2,6 sialylated branched N-glycans with at least three N-acetyllactosamine units (tri-LacNAc).
35029088	0	73	part_of	glycol/multi-walled	36:54	arg1	Biocompatible chitosan/polyethylene glycol/multi-walled carbon nanotube composite	multi		Biocompatible chitosan/polyethylene glycol/multi-walled carbon nanotube composite		OGER	Site	multi		composite	Biocompatible chitosan/polyethylene glycol/multi-walled carbon nanotube composite scaffolds for neural tissue engineering.
35545925	6	11	part_of	mDAP	1023:1026	arg1	mDAP residues	mDAP		mDAP residues		PUBTATOR	Site	mDAP	223453	residues	We identified 448 unique muropeptides and provide the first evidence for stem peptides modified with O-methylation, meso-diaminopimelic acid (mDAP) deamination, and novel substitutions of mDAP residues within P. aeruginosa PG.
37146305	3	87	gly	glycopeptides	788:800	arg2	O-linked intact glycopeptides			O-linked intact glycopeptides						glycopeptides	In this study, we developed an integrated platform for the simultaneous enrichment and characterization of N- and O-linked intact glycopeptides from the same serum sample.
35795888	1	66	part_of	lysozyme	262:269	arg1	Lys-Ce-MSNs	lysozyme		Lys-Ce-MSNs		PUBTATOR	AminoAcid	lysozyme	4069	Lys	A novel biomaterial comprising alginate dialdehyde-gelatine (ADA-GEL) hydrogel augmented by lysozyme loaded mesoporous cerium doped silica-calcia nanoparticles (Lys-Ce-MSNs) is 3D printed to create bioactive scaffolds.
35956904	4	12	part_of	β-CD/CMK-8	633:642	arg1	the β-CD/CMK-8 composite	-CD		the β-CD/CMK-8 composite		PUBTATOR	Site	-CD	65057	composite	Besides this, the β-CD/CMK-8 composite displayed high enrichment ability toward Cu2+.
36063891	10	21	gly	used	1746:1749	arg2	this hybrid composite			this hybrid composite						composite	These results showed that this hybrid composite could be used as an efficient coating material to produce slow-release fertilizers with multifunctional performances.
36327727	19	92	part_of	CNC	2472:2474	arg1	novel CNC composites	CNC		novel CNC composites		OGER	Site	CNC	P32418	composites	This fundamental understanding of the SA of rods in suspensions facilitates the engineering of novel CNC composites of unique optical properties which enables novel applications such as in sensors and bio-diagnostics.
35712026	9	89	gly	CD16a	1511:1515	arg1	four N-glycans	CD16a			four N-glycans	PUBTATOR		CD16a	2214		These observations were confirmed using intact protein mass spectrometry that demonstrated the predominant species corresponded to CD16a V158 with five N-glycans, with a smaller contribution from CD16a with four N-glycans.
37146305	2	30	gly	glycopeptides	570:582	arg2	O-linked intact glycopeptides			O-linked intact glycopeptides						glycopeptides	However, the micro-heterogeneity and low abundance nature of N-/O-linked glycosylation, as well as the time-consuming and tedious procedures for the enrichment of O-linked intact glycopeptides, pose great challenges for their efficient and accurate characterization.
35753678	5	22	part_of	factor	942:947	arg1	domains	von Willebrand factor		domains		OGER	Site	von Willebrand factor	P04275	domains	The composition of pearl matrix proteins and the high frequency conserved domains like carbonic anhydrase, von Willebrand factor type A, tyrosinase and chitin binding 2 in protein sequences, implying that the "chitin-silk fibroin gel proteins-acidic macromolecules" model was suitable for description the pearl biomineralization process.
35753678	5	42	part_of	protein	992:998	arg1	protein sequences	protein		protein sequences		Fterm	Site	protein		sequences	The composition of pearl matrix proteins and the high frequency conserved domains like carbonic anhydrase, von Willebrand factor type A, tyrosinase and chitin binding 2 in protein sequences, implying that the "chitin-silk fibroin gel proteins-acidic macromolecules" model was suitable for description the pearl biomineralization process.
35753678	5	58	part_of	proteins	852:859	arg1	The composition	proteins		The composition		Fterm	Site	proteins		position	The composition of pearl matrix proteins and the high frequency conserved domains like carbonic anhydrase, von Willebrand factor type A, tyrosinase and chitin binding 2 in protein sequences, implying that the "chitin-silk fibroin gel proteins-acidic macromolecules" model was suitable for description the pearl biomineralization process.
35853338	3	13	part_of	PMAL-CTS/MMT	704:715	arg1	PMAL-CTS/MMT nanocomposite	CTS		PMAL-CTS/MMT nanocomposite		PUBTATOR	Site	CTS	7276	nanocomposite	Interestingly, the adsorption efficiency of PMAL-CTS/MMT nanocomposite towards both dyes in the single and binary systems was extremely high due to plenty of functional groups.
36710533	4	57	part_of	METHODS	560:566	arg1	METHODS Face	|METHODS
Face|		METHODS Face		OGER		|METHODS
Face|	Q9H5J4		METHODS Face of 20 healthy female volunteers between 18 and 24 years was smeared with sodium hyaluronate solution once per day.
35452117	3	25	part_of	PG	447:448	arg1	PG fragments	PG		PG fragments		Cterm	Site	PG		fragments	Here, we isolated PG fragments from A. muciniphila MucT (ATCC BAA-835), analyzed their composition and evaluated their immune signaling capacity.
35640686	2	69	part_of	MWCNTs/CS-PVA/GA	400:415	arg1	glutaraldehyde cross-linked poly (vinyl alcohol)/chitosan nanocomposite	PVA		glutaraldehyde cross-linked poly (vinyl alcohol)/chitosan nanocomposite		OGER	Site	PVA	P32926	nanocomposite	This study aimed to develop and apply MWCNTs reinforced with glutaraldehyde cross-linked poly (vinyl alcohol)/chitosan nanocomposite (MWCNTs/CS-PVA/GA NC) for removal of tetracycline (TC) as a model of antibiotics from aqueous solutions.
37016048	9	2	part_of	FAs	1410:1412	arg1	the chemical compositions	FAs		the chemical compositions		OGER	Site	FAs	P25445	positions	Together, our findings reveal that the chemical compositions and concentrations of dietary FAs are key factors in the intricate regulation of monocyte-mediated inflammation.
35927436	5	60	gly	glycosylation	646:658	arg2	up to 16 unique O-linked glycosylation sites			up to 16 unique O-linked glycosylation sites						sites	We detect up to 16 unique O-linked glycosylation sites in the MLD, and two O-linked sites in the receptor-binding GP1 subunit.
36550362	7	15	gly	protein	1086:1092	arg1	N-linked glycans	Spike protein			N-linked glycans	PUBTATOR		Spike protein	None		ELISAs with deglycosylated and desialated Spike S1 subunits revealed that cross-reactive antibodies target sialic acid on N-linked glycans of the Spike protein.
35572846	8	84	gly	glycopeptides	1014:1026	arg2	glycopeptides			glycopeptides						glycopeptides	The mapping of the peptide and glycopeptides using LC-ESI-MS led to the detection of associated PTMs and the direct identification of a glycopeptide, GlcNAc3Man2.
35572846	8	120	gly	PTMs	1079:1082	arg1	GlcNAc3Man2	PTMs			GlcNAc3Man2	OGER		PTMs	P20962		The mapping of the peptide and glycopeptides using LC-ESI-MS led to the detection of associated PTMs and the direct identification of a glycopeptide, GlcNAc3Man2.
35572846	8	73	gly	glycopeptide	1119:1130	arg2	a glycopeptide			glycopeptide	GlcNAc3Man2					glycopeptide	The mapping of the peptide and glycopeptides using LC-ESI-MS led to the detection of associated PTMs and the direct identification of a glycopeptide, GlcNAc3Man2.
35491853	0	65	part_of	Long-Term	0:8	arg1	Long-Term Compost Amendment Spurs Cellulose Decomposition	Long		Long-Term Compost Amendment Spurs Cellulose Decomposition		OGER	Site	Long		position	Long-Term Compost Amendment Spurs Cellulose Decomposition by Driving Shifts in Fungal Community Composition and Promoting Fungal Diversity and Phylogenetic Relatedness.
36550362	0	46	gly	epitopes	82:89	arg1	the SARS-CoV-2 Spike protein	Spike protein			epitopes	PUBTATOR		Spike protein	43740568		Plasmodium infection is associated with cross-reactive antibodies to carbohydrate epitopes on the SARS-CoV-2 Spike protein.
36417060	1	68	gly	utilized	199:206	arg2	Alginate@ Fe3O4/Bentonite nanocomposite			Alginate@ Fe3O4/Bentonite nanocomposite						nanocomposite	In this study, Alginate@ Fe3O4/Bentonite nanocomposite was utilized to eliminate formaldehyde from wastewater.
36358088	4	34	part_of	PSP	706:708	arg1	PSP peel residues	PSP		PSP peel residues		OGER	Site	PSP	P78330	residues	Results showed the optimal technological parameters were as follows: the ratio between PSP peel residues and 75 wt% maleic acid was 1:10 (g/mL, W/W), and ultrasonic-assisted hydrolysis was carried out at 60℃ for 1 h, followed by 120℃ for 2.5 h.
36370856	8	86	part_of	curcumin-capped	1434:1448	arg1	curcumin-capped AgNPs/mixed-dimensional palygorskite clay nanocomposites	curcumin		curcumin-capped AgNPs/mixed-dimensional palygorskite clay nanocomposites		Fterm	Site	curcumin		nanocomposites	By contrast, the chitosan composite films containing curcumin-capped AgNPs/mixed-dimensional palygorskite clay nanocomposites exhibited the best mechanical properties, antioxidant and antibacterial activities.
35326419	5	61	part_of	BA	723:724	arg1	the overall BA composition	BA		the overall BA composition		PUBTATOR	Site	BA	230101	position,	Pectin modified the overall BA composition, favoring an augmentation in the proportion of hydrophilic forms in the liver, plasma, and gut.
36296679	7	39	gly	metalloproteinase	1216:1232	arg1	the glycan structures	matrix metalloproteinase 1			the glycan structures	PUBTATOR		matrix metalloproteinase 1	4312		The mechanism of action appears to involve the carbohydrate-binding capacity of ConGF, and in silico studies suggested that the lectin can interact with the glycan structures of matrix metalloproteinase 1 (MMP1), a prominent protein found in malignant cells, likely explaining the observed effects.
36001455	4	50	part_of	NIR	673:675	arg1	the near infrared (NIR) II region	NIR		the near infrared (NIR) II region		OGER	Site	NIR	Q9Y3T9	region	Herein, a reduced polyanionic cluster (rP2W18) bearing the absorption at the near infrared (NIR) II region is used as a core carrier to bind the positively charged doxorubicin hydrochloride (DOX) through ionic interaction.
35746260	3	19	part_of	CuNPs-CSF-CNPs-MWCNTs	517:537	arg1	Then the CuNPs-CSF-CNPs-MWCNTs composite	CSF		Then the CuNPs-CSF-CNPs-MWCNTs composite		OGER	Site	CSF		composite	Then the CuNPs-CSF-CNPs-MWCNTs composite was facilely prepared by one-step co-electrodeposition of CuNPs and CNPs fixed chitosan residues on modified electrode.
35956904	1	45	gly	used	178:181	arg2	β-cyclodextrin (β-CD)/mesoporous carbon (CMK-8) nanocomposite			β-cyclodextrin (β-CD)/mesoporous carbon (CMK-8) nanocomposite						nanocomposite	In this work, β-cyclodextrin (β-CD)/mesoporous carbon (CMK-8) nanocomposite was synthesized and used as an electrochemical sensing platform for highly sensitive and selective detection of Cu2+.
35755600	9	99	gly	sialylated	1533:1542	arg1	sialylated structures				sialylated structures						Levels of high mannose, hybrid and sialylated structures were temporally altered (p<0·05).
36038978	1	29	part_of	multi-compound	439:452	arg1	A polymer-TiO2 macro composite	multi		A polymer-TiO2 macro composite		OGER	Site	multi		composite	A polymer-TiO2 macro composite (i.e., PVA-CS-TiO2) was synthesized via chemical precipitation of PVA-CS-TiO2 blend in alkali/solvent medium and applied for the removal of three model antibiotics (i.e., metronidazole (MNZ), ceftiofur (CEF) and tetracycline (TET)), as single compound and multi-compound conditions.
36772992	5	75	part_of	sites	852:856	arg1	endotoxin	endotoxin		sites		Fterm	Site	endotoxin		sites	Differences (p ≤ .05) between sample collection sites in total DNA concentration, microbial richness, mean intra-group distances, and endotoxin quantification alongside reagent controls were evaluated.
37169054	6	31	part_of	PAN	860:862	arg1	nanocomposite	PAN		nanocomposite		OGER	Site	PAN		nanocomposite	For comparative study, pure ZnO and nanocomposite of PAN doped with ZnO (PAN/ZnO) were also prepared.
35074101	1	39	part_of	BC/HAp	155:160	arg1	Bacterial cellulose/hydroxyapatite (BC/HAp) composite	HAp		Bacterial cellulose/hydroxyapatite (BC/HAp) composite		OGER	Site	HAp	Q15424	composite	Bacterial cellulose/hydroxyapatite (BC/HAp) composite is an outstanding candidate for bone tissue engineering.
37365335	5	13	gly	glycoproteins	801:813	arg1	These enzymes	These enzymes				Fterm		enzymes			These enzymes are secreted as glycoproteins with diverse N-glycans.
37365335	5	29	gly	glycoproteins	801:813	arg1	diverse N-glycans	glycoproteins			diverse N-glycans	Fterm		glycoproteins			These enzymes are secreted as glycoproteins with diverse N-glycans.
35655126	1	94	part_of	traits	260:265	arg1	reciprocal positions	traits		reciprocal positions		OGER	Site	traits	Q96CJ1	positions	BACKGROUND Floral morphs are characterized differentiations in reciprocal positions of sexual organs and ancillary floral traits in heterostylous plants.
35869684	7	43	part_of	2:1 PC	1085:1090	arg1	the composition	2:1 PC		the composition		OGER	Site	2:1 PC	P35326	position	The optimal bilosomal formula (OB), with the desirability of 0.814 and the composition of 2:1 PC: EA ratio, 0.26% w/v HA and sodium cholate as EA, was subjected to further in vitro characterizations and in vivo evaluation studies.
37245444	2	34	part_of	CT-CSB	595:600	arg1	CT-CSB composite	CT-CSB		CT-CSB composite		OGER	Site	CT-CSB	Q03468	composite	To tackle the waste issue of crawfish shells and simultaneously minimize the threat of arsenic (As) and lead (Pb) to human health, a pot trial was conducted using chitin (CT), crawfish shell biochar (CSB), crawfish shell powder (CSP), and CT-CSB composite to compare their remediation efficiencies in As/Pb co-contaminated soil.
37392633	6	8	part_of	pectin	1120:1125	arg1	the external region	pectin		the external region		Fterm	Site	pectin		region	The phenolics not only attached to the external region of spherical pectin by hydrogen bonds, but also got into hydrophobic cavities of spherical pectin and attached to the internal region by hydrophobic interactions.
35881786	2	31	part_of	HSPG	257:260	arg1	Altered HSPG composition	Altered HSPG		Altered HSPG composition		OGER	Site	Altered HSPG	P34741	position	Altered HSPG composition during tumorigenesis strongly aids cancer progression.
35881786	2	34	part_of	Altered	249:255	arg1	Altered HSPG composition	Altered HSPG		Altered HSPG composition		OGER	Site	Altered HSPG	P34741	position	Altered HSPG composition during tumorigenesis strongly aids cancer progression.
35475171	7	52	gly	O-glycoforms	1255:1266	arg1	Omicron O-glycoforms	Omicron O-glycoforms				Cterm		Omicron			Our findings reveal high resolution detail of Omicron O-glycoforms and their utilization to provide direct molecular evidence of proteoform alterations in the Omicron variant which could shed light on how this variant escapes immunological protection.
35927436	6	15	gly	observed	768:775	arg2	N-linked glycosylation sequons AND Multiple O-linked glycans			N-linked glycosylation sequons	Multiple O-linked glycans						Multiple O-linked glycans are observed within N-linked glycosylation sequons, suggesting crosstalk between the two types of modifications.
35927436	6	21	gly	glycosylation	793:805	arg2	N-linked glycosylation sequons			N-linked glycosylation sequons							Multiple O-linked glycans are observed within N-linked glycosylation sequons, suggesting crosstalk between the two types of modifications.
35413312	1	47	part_of	lignin	243:248	arg1	the nanomaterial composition	lignin		the nanomaterial composition		Fterm	Site	lignin		position	Lignin-cellulose nanofibrils (LCNF) are of attracting an increasing interest due to the benefits of maintaining the lignin in the nanomaterial composition.
36446650	5	1	part_of	dentin	767:772	arg1	composition	dentin		composition		Fterm	Site	dentin		position,	The morphology, composition, and mechanical properties of conditioned dentin from each group were characterized.
36217671	4	45	part_of	GOx-CAT	854:860	arg1	the GOx-CAT nanoenzyme (GCNE) composite	GOx		the GOx-CAT nanoenzyme (GCNE) composite		PUBTATOR	Site	GOx	54363	composite	By simultaneously forming the GOx-CAT nanoenzyme (GCNE) composite, the GCNC hydrogel complex could effectively reduce glucose and ROS (H2O2) concentrations in diabetic wounds through cascade catalytic reactions and achieve continuous oxygen supply, which promoted cell proliferation, migration, and angiogenesis, thereby accelerating diabetic wound healing.
35731847	3	22	part_of	HSN	540:542	arg1	these HSN@RL-QN15 nanocomposites	HSN		these HSN@RL-QN15 nanocomposites		OGER	Site	HSN	Q16658	nanocomposites	In this study, the prohealing peptide RL-QN15 was loaded into hollow silica nanoparticles (HSNs), with these HSN@RL-QN15 nanocomposites then combined with zinc alginate (ZA) gels to obtain HSN@RL-QN15/ZA hydrogel.
35460758	0	46	part_of	ovalbumin/sodium	41:56	arg1	polyphenol-metal ion-coated ovalbumin/sodium alginate composite	ovalbumin		polyphenol-metal ion-coated ovalbumin/sodium alginate composite		Fterm	Site	ovalbumin		composite	Influence of polyphenol-metal ion-coated ovalbumin/sodium alginate composite nanoparticles on the encapsulation of kaempferol/tannin acid.
35712026	10	59	gly	N-glycosylation	1614:1628	arg2	all detected N-glycosylation sites			all detected N-glycosylation sites						sites	Occupancy was likewise high for the membrane-bound receptor at all detected N-glycosylation sites using CD16a purified from cultured human natural killer cells.
35907557	3	134	part_of	ECM	641:643	arg1	the ECM composition	ECM		the ECM composition		OGER	Site	ECM	B2RPV6	position	We hypothesized that manipulating both the number of CMP-collagen tethers and the ECM composition would provide a powerful strategy to control growth factor gene transfer kinetics while regulating cell behavior, resulting in enhanced growth factor activity for wound repair.
37230566	10	67	part_of	peptides	1831:1838	arg1	various PHs	PHs		peptides		OGER		PHs	P61457		The established qualitative and quantitative assays were successfully applied to study the distribution characteristics of LPs in mice, and would be conductive to systematically map the profile and pharmacokinetics of peptides in various PHs in vivo and in vitro.
35059938	9	11	part_of	Enzyme	1383:1388	arg1	Enzyme fragments	Enzyme		Enzyme fragments		Cterm	Site	Enzyme		fragments	Enzyme fragments were observed bound with hydrogel beads when screened for surface topology indicating successful crosslinking.
35927436	8	14	gly	glycans	1086:1092	arg1	the conserved sites			the conserved sites	the conserved sites		SpecificSite			sites N257	We find complex glycosylation at the majority of N-linked sites, while the conserved sites N257 and especially N563 are enriched in unprocessed glycans, suggesting a role in host-cell attachment via DC-SIGN/L-SIGN.
35927436	8	35	gly	sites	1027:1031	arg1	N563			N563						N563	We find complex glycosylation at the majority of N-linked sites, while the conserved sites N257 and especially N563 are enriched in unprocessed glycans, suggesting a role in host-cell attachment via DC-SIGN/L-SIGN.
35927436	8	35	gly	sites	1027:1031	arg1	N257			sites N257						sites N257	We find complex glycosylation at the majority of N-linked sites, while the conserved sites N257 and especially N563 are enriched in unprocessed glycans, suggesting a role in host-cell attachment via DC-SIGN/L-SIGN.
36007742	1	69	part_of	B-CuFe-CNC	247:256	arg1	cellulose nanocrystals (B-CuFe-CNC) biocomposites	CNC		cellulose nanocrystals (B-CuFe-CNC) biocomposites		PUBTATOR	Site	CNC	5573	biocomposites	In this work, engineered biochar decorated layered double hydroxides and cellulose nanocrystals (B-CuFe-CNC) biocomposites were synthesized by the facile ultrasonicated-co-precipitation technique.
35028784	1	58	gly	heterogeneity	103:115	arg1	elastin	elastin				OGER		elastin	P15502		The heterogeneity and contribution of collagen and elastin to residual stresses have been thoroughly studied, but more recently, glycosaminoglycans (GAGs) also emerged as potential regulators.
36986193	8	7	gly	sialylated	1430:1439	arg1	grouped sialylated HMOs	grouped sialylated HMOs				OGER		HMOs	P00540		Multiple regression analyses were performed in R. Results indicated that concentrations of 2'-fucosyllactose and grouped fucosylated HMOs were associated with better executive functions, while concentrations of grouped sialylated HMOs were associated with worse executive functions at age three years.
36986193	8	47	gly	fucosylated	1332:1342	arg1	grouped fucosylated HMOs	grouped fucosylated HMOs				OGER		HMOs	P00540		Multiple regression analyses were performed in R. Results indicated that concentrations of 2'-fucosyllactose and grouped fucosylated HMOs were associated with better executive functions, while concentrations of grouped sialylated HMOs were associated with worse executive functions at age three years.
35379265	12	2	part_of	Aβ	1757:1758	arg1	Aβ deposition	Aβ 		Aβ deposition		PUBTATOR	Site	Aβ 	11820	position	In addition, we observed exacerbations in blood-brain barrier (BBB) integrity, microglial activation, neuronal apoptosis in the CA1 region of the hippocampus, and Aβ deposition in the thalamus of PSCI mice in comparison with nPSCI mice.
35379265	12	12	part_of	CA1	1722:1724	arg1	the CA1 region	CA1		the CA1 region		OGER	Site	CA1	P13634	region	In addition, we observed exacerbations in blood-brain barrier (BBB) integrity, microglial activation, neuronal apoptosis in the CA1 region of the hippocampus, and Aβ deposition in the thalamus of PSCI mice in comparison with nPSCI mice.
35608970	11	64	gly	lipase	1943:1948	arg1	l-arabinose	lipase			l-arabinose	Fterm		lipase			Acid production from l-arabinose, d-xylose, d-mannose, amygdalin, cellobiose, maltose, melibiose, sucrose, raffinose, gentiobiose and l-fucose, and activity of esterase lipase (C8) and α-fucosidase could differentiate strain S053-2T from B. asteroides DSM 20089T.
35608970	11	64	gly	lipase	1943:1948	arg1	l-fucose	lipase			l-fucose	Fterm		lipase			Acid production from l-arabinose, d-xylose, d-mannose, amygdalin, cellobiose, maltose, melibiose, sucrose, raffinose, gentiobiose and l-fucose, and activity of esterase lipase (C8) and α-fucosidase could differentiate strain S053-2T from B. asteroides DSM 20089T.
35608970	11	64	gly	lipase	1943:1948	arg1	d-xylose	lipase			d-xylose	Fterm		lipase			Acid production from l-arabinose, d-xylose, d-mannose, amygdalin, cellobiose, maltose, melibiose, sucrose, raffinose, gentiobiose and l-fucose, and activity of esterase lipase (C8) and α-fucosidase could differentiate strain S053-2T from B. asteroides DSM 20089T.
35608970	11	64	gly	lipase	1943:1948	arg1	d-mannose	lipase			d-mannose	Fterm		lipase			Acid production from l-arabinose, d-xylose, d-mannose, amygdalin, cellobiose, maltose, melibiose, sucrose, raffinose, gentiobiose and l-fucose, and activity of esterase lipase (C8) and α-fucosidase could differentiate strain S053-2T from B. asteroides DSM 20089T.
35059938	7	72	part_of	enzyme	1204:1209	arg1	enzyme fragments	enzyme		enzyme fragments		Fterm	Site	enzyme		fragments	This bifunctional crosslinking agent performed two important tasks that includes functionalization of hydrogel beads and crosslinking of this activated matrix system with enzyme fragments.
36417060	5	22	gly	used	776:779	arg2	Alginate@Fe3O4@Bentonite composite			Alginate@Fe3O4@Bentonite composite						composite	Also, Alginate@Fe3O4@Bentonite composite was used to eliminate formaldehyde from Razi petrochemical wastewater and was able to eliminate 91.24% of formaldehyde, 70% of COD, and 68.9% of BOD5.
37110540	4	41	part_of	lignin	705:710	arg1	the composite	lignin		the composite		Fterm	Site	lignin		composite	At first, the corncob was treated with the lower concentration of zinc chloride aqueous solution (30-55 w%) at 95 °C with a short reaction time (8-12 min) and 30.4 w% (selectivity = 89%) of xylose obtained with a solid residue of the composite of cellulose and lignin.
36328080	6	76	part_of	Of-Pis1	986:992	arg1	the N-terminal region	Pis1		the N-terminal region		OGER	Site	Pis1	O14735	region	In DPC and SDS instead, the N-terminal region of Of-Pis1 forms an amphipathic α-helix with the non-polar face in close contact with the micelles.
35746260	0	31	part_of	One-Step	0:7	arg1	One-Step Co-Electrodeposition	Step		One-Step Co-Electrodeposition		OGER	Site	Step	P54829	position	One-Step Co-Electrodeposition of Copper Nanoparticles-Chitosan Film-Carbon Nanoparticles-Multiwalled Carbon Nanotubes Composite for Electroanalysis of Indole-3-Acetic Acid and Salicylic Acid.
35131354	4	64	part_of	HME-filament	595:606	arg1	HME-filament composition	HME		HME-filament composition		OGER	Site	HME	P39900	position	It explored and demonstrated the effect of HME-filament composition and fabrication on printability by evaluating thermal, mechanical, and thermo-rheological properties.
35294989	1	80	gly	used	268:271	arg2	Collagen-tripeptide			Collagen-tripeptide						Collagen-tripeptide	Collagen-tripeptide (CTP) and galacto-oligosaccharide (GOS), which improve collagen homeostasis and barrier function in the skin, are widely used in the food industry to improve wrinkle-related parameters and skin health.
35028784	2	13	part_of	pigs	567:570	arg1	the ascending, aortic arch and descending thoracic regions	6-month-old pigs		the ascending, aortic arch and descending thoracic regions		OGER	Site	6-month-old pigs	Q96S52	regions	In this study, the opening angle of aortic rings (an indicator of circumferential residual stresses) and the mural distributions of sulfated GAGs (sGAG), collagen, and elastin were quantified in the ascending, aortic arch and descending thoracic regions of 5- to 6-month-old pigs.
36939183	2	14	part_of	NPs	367:369	arg1	surface composition	NPs		surface composition		OGER	Site	NPs	P0C0P6	position,	The electronic properties, surface functional group, surface composition, size, and morphologies of the as-synthesized β-CD@CeO2 NPs were characterized using UV-visible spectroscopy, FTIR analysis, high resolution X-ray photoelectron spectroscopy (HRXPS), high resolution transmission electron microscopy (HRTEM), and field emission scanning electron microscopy (FESEM).
35712026	4	9	gly	N-glycosylation	677:691	arg2	multiple N-glycosylation sites			multiple N-glycosylation sites						sites	It is notable that CD16a is highly processed with multiple N-glycosylation sites, and preventing individual N-glycan modifications affects affinity.
35429711	2	17	part_of	MOF/polydopamine	321:336	arg1	zwitterionic UiO-66/ZIF-8 binary MOF/polydopamine@cellulose acetate composite	MOF		zwitterionic UiO-66/ZIF-8 binary MOF/polydopamine@cellulose acetate composite		OGER	Site	MOF	Q9H7Z6	composite	Herein, zwitterionic UiO-66/ZIF-8 binary MOF/polydopamine@cellulose acetate composite (UiO-66/ZIF-8/PDA@CA) were fabricated in the form of floated beads for the adsorptive removal of tetracycline (TC).
37172419	2	41	gly	glycosylated	244:255	arg1	heavily glycosylated proteins	heavily glycosylated proteins				Fterm		proteins			Mucins, the main macromolecule, are heavily glycosylated proteins that polymerise and retain water molecules, resulting in a hydrated biogel.
35853338	4	26	part_of	PMAL-CTS/MMT	999:1010	arg1	The PMAL-CTS/MMT nanocomposite	CTS		The PMAL-CTS/MMT nanocomposite		PUBTATOR	Site	CTS	7276	nanocomposite	The affinity of PMAL-CTS/MMT towards cationic and anionic dyes resulted from the feasible modulation of the surface charges as a function of the solution pH. The PMAL-CTS/MMT nanocomposite exhibited a maximum adsorption capacity of 518 and 1910 mg g-1 for AY17 and BG, respectively, which is higher than most of the adsorbents reported in recent literature studies.
35104013	1	55	gly	glycans	150:156	arg1	the spike protein	protein			glycans	Fterm		protein			Oligomannose-type glycans on the spike protein of HIV-1 constitute relevant epitopes to elicit broadly neutralizing antibodies (bnAbs).
35997573	4	6	part_of	LysM	835:838	arg1	three LysM domains	LysM		three LysM domains		Cterm	Site	LysM		domains	The LysM effector Ecp6 from the tomato (Solanum lycopersicum) leaf mold fungus Cladosporium fulvum can outcompete plant PRRs for chitin binding because two of its three LysM domains cooperate to form a composite groove with ultra-high (pM) chitin-binding affinity.
35570556	0	79	part_of	gelatin-sodium	99:112	arg1	injectable ciprofloxacin-loaded gelatin-sodium carboxymethyl cellulose composite	gelatin		injectable ciprofloxacin-loaded gelatin-sodium carboxymethyl cellulose composite		Fterm	Site	gelatin		composite	Designing, structural determination, and antibacterial activity of injectable ciprofloxacin-loaded gelatin-sodium carboxymethyl cellulose composite nanogels against Staphylococcus aureus.
35416346	7	61	part_of	ECM	1399:1401	arg1	ECM composition	ECM		ECM composition		OGER	Site	ECM	Q13201	position	In conclusion, SIRT1 activation positively impacts on the expression of the main ECM proteins, while altering ECM composition and suppressing GAG content during human cartilage development.
37146305	5	6	gly	glycopeptides	1382:1394	arg2	significantly changed O-linked and N-linked intact glycopeptides			significantly changed O-linked and N-linked intact glycopeptides						glycopeptides	Determined with high reproducibility, this platform was further applied to the differential analysis of serum samples of gastric cancer and health control, which revealed 17 and 181 significantly changed O-linked and N-linked intact glycopeptides.
35131354	5	25	part_of	HME-Polymer	746:756	arg1	the HME-Polymer filament composition	HME		the HME-Polymer filament composition		OGER	Site	HME	P39900	position	It also showed that the HME-Polymer filament composition used in FDM-3DP manufacture of oral solid dosage forms provides a tailored drug release profile.
35956904	1	25	part_of	β-CD	112:115	arg1	β-cyclodextrin (β-CD)/mesoporous carbon (CMK-8) nanocomposite	-CD		β-cyclodextrin (β-CD)/mesoporous carbon (CMK-8) nanocomposite		PUBTATOR	Site	-CD	65057	nanocomposite	In this work, β-cyclodextrin (β-CD)/mesoporous carbon (CMK-8) nanocomposite was synthesized and used as an electrochemical sensing platform for highly sensitive and selective detection of Cu2+.
36175622	0	18	gly	Glycoproteins	43:55	arg1	Comprehensive Cellular Glycan Profiling	proteins			Comprehensive Cellular Glycan Profiling	Fterm		proteins			Comprehensive Cellular Glycan Profiling of Glycoproteins and Glycosphingolipids by Glycoblotting and BEP Methods.
35927436	0	85	gly	glycoprotein	41:52	arg1	the ebolavirus envelope glycoprotein GP	the ebolavirus envelope glycoprotein GP				PUBTATOR		envelope glycoprotein GP	100616444		Glycan shield of the ebolavirus envelope glycoprotein GP.
35765003	6	79	part_of	Wnt	1146:1148	arg1	Wingless-related integration site	Wnt		Wingless-related integration site		PUBTATOR	Site	Wnt	7471	site	PCR (Polymerase Chain Reaction) array analysis of the Wnt (Wingless-related integration site) signaling pathway revealed that Sr2+ cross-linked microspheres appropriately induced various signaling transduction pathways in human osteoblasts leading to osteogenic activity and dynamic growth.
37363916	5	59	gly	glycoproteins	795:807	arg1	SEA glycoproteins	SEA glycoproteins				Fterm		glycoproteins			Using SEA glycoproteins purified by affinity chromatography and synthetic glycans coupled to gold nanoparticles, we investigated the role of these glycan structures in inducing IL-10 production by B cells.
36175622	2	3	gly	attached	213:220	arg2	proteins AND Glycans	proteins			Glycans	Fterm		proteins			Glycans are covalently attached to proteins and lipids, and are classified into subclasses such as N-linked glycans, glycosaminoglycans, glycosphingolipid-glycans, free oligosaccharides, and O-linked glycans according to their biosynthetic pathways.
37146305	6	100	gly	glycoproteins	1417:1429	arg1	five glycoproteins	five glycoproteins				Fterm		glycoproteins			Interestingly, five glycoproteins containing both significant regulation of N- and O-glycosylation were observed, hinting potential co-regulation of different types of glycosylation during tumor progress.
35712026	0	23	gly	N-glycosylated	55:68	arg1	The antibody-binding Fc gamma receptor IIIa	The antibody-binding Fc gamma receptor IIIa				PUBTATOR		Fc gamma receptor IIIa	2214		The antibody-binding Fc gamma receptor IIIa / CD16a is N-glycosylated with high occupancy at all five sites.
35712026	0	23	gly	N-glycosylated	55:68	arg1	CD16a	CD16a				PUBTATOR		CD16a	2214		The antibody-binding Fc gamma receptor IIIa / CD16a is N-glycosylated with high occupancy at all five sites.
36551250	6	65	gly	SV2A	931:934	arg1	N-glycan moiety	SV2A			N-glycan moiety	PUBTATOR		SV2A	9900		Our study suggested that interaction of BoNT/F1 with SV2A is exclusively mediated by N-glycan moiety of SV2A, which interacts with aromatic residues Y898, Y910, F946, Y1059 and H1273 of this toxin.
35718096	4	12	part_of	SCD1	681:684	arg1	lipid composition	SCD1		lipid composition		PUBTATOR	Site	SCD1	20249	position	While the intestine is an important site of lipid esterification and assimilation into the body, the regulation of intestinal SCD1 or its impact on lipid composition in the intestine and other tissues has not been investigated.
35569536	16	120	gly	used	2995:2998	arg2	the synthesised nanocomposite			the synthesised nanocomposite						nanocomposite	Further, the sorption studies revealed the utilisation of Langmuir mechanism and pseudo II order model successfully The present finding implies that the synthesised nanocomposite can be used as an effective, safe food preservative agent and adsorbent of toxic chemicals.
35604178	6	44	gly	glycopeptide	1398:1409	arg2	the functional glycopeptide			the functional glycopeptide						glycopeptide	This two-step approach involving augmentation of intracellular trehalose at a hypothermic temperature and membrane stabilization of the functional glycopeptide could be an alternative way for human cell cryopreservation.
36813813	5	9	gly	glycoproteins	848:860	arg1	the glycoproteins	the glycoproteins				Fterm		glycoproteins			Since the changes in the CNTs band gaps in the presence of N-linked are about two times larger than the changes in the presence of the O-linked glycoprotein, chiral CNT may distinguish different types of the glycoproteins.
36813813	5	10	gly	glycoprotein	784:795	arg1	the O-linked glycoprotein	the O-linked glycoprotein				PUBTATOR		O-linked glycoprotein	None		Since the changes in the CNTs band gaps in the presence of N-linked are about two times larger than the changes in the presence of the O-linked glycoprotein, chiral CNT may distinguish different types of the glycoproteins.
36930680	5	89	part_of	proteins	1028:1035	arg1	The different composition	proteins		The different composition		Fterm	Site	proteins		position	The different composition of surface proteins in S. aureus caused by the loss of SarA, SigB, Lgt, and SaeS had no significant influence on its binding activity.
36328080	12	31	part_of	Of-Pis1	1779:1785	arg1	Of-Pis1 amino acid sequence	Pis1		Of-Pis1 amino acid sequence		PUBTATOR	Site	Pis1	O14735	sequence	The conformational information is discussed in terms of Of-Pis1 amino acid sequence and composition to provide insights useful to design more potent and selective AMPs.
36796564	16	59	part_of	SnO-IG	2085:2090	arg1	the prepared SnO-IG biocomposite	SnO		the prepared SnO-IG biocomposite		OGER	Site	SnO	P12757	biocomposite	Also, an acceptable result (96.47 % dye removal) was obtained with the prepared SnO-IG biocomposite for dye removal from textile wastewater.
37267648	3	31	part_of	possessed	766:774	arg1	CSP AND more homogalacturonan (HG) domains	CSP		more homogalacturonan (HG) domains		OGER	Site	CSP	Q9H3Z4	domains	The monosaccharide compositions indicated that the WSP and CSP possessed more homogalacturonan (HG) domains than the NSP, which contains more rhamngalacturonan-I (RG-I) domains.
37267648	3	34	part_of	contains	831:838	arg1	the NSP AND more rhamngalacturonan-I (RG-I) domains	the NSP		more rhamngalacturonan-I (RG-I) domains		OGER	Site	NSP	Q16799	domains	The monosaccharide compositions indicated that the WSP and CSP possessed more homogalacturonan (HG) domains than the NSP, which contains more rhamngalacturonan-I (RG-I) domains.
36813813	7	41	gly	glycosylation	1011:1023	arg1	the spike protein	the spike protein				Fterm		protein			Thereby, we predict CNBs and chiral CNTs have suitable potential in sequential analysis of N- and O-linked glycosylation of the spike protein.
37298671	6	44	part_of	protein	944:950	arg1	protein composition	protein		protein composition		Fterm	Site	protein		position,	Traits related to protein composition, including nitrogen, peptide, and RuBisCO contents, were enhanced in PBB-treated plants (mostly for HWG and PF at 2 g/kg soil) by 100% and >250% in HNC and LNC, respectively, compared to control.
35568899	4	48	gly	xylanase	645:652	arg1	a thermostable metagenomic xylanase Xyl40	xylanase			a thermostable metagenomic xylanase Xyl40	Fterm		xylanase			Two xylanases from the mesophilic Trichoderma reesei, TrXyn1, TrXyn2, and two forms of a thermostable metagenomic xylanase Xyl40 were compared.
36516686	4	1	part_of	ECT	794:796	arg1	0.01% or 0.05% poly-l-lysine	CAC ECT: 2		0.01% or 0.05% poly-l-lysine		OGER	AminoAcid	CAC ECT: 2	P27139	lysine	All optimised AP-coated gels (AP1- and AP5.5-CAC ECT: 2 mg/ml collagen, 1.5% high molecular weight alginate, 50,000 cells/gel, with 0.01% or 0.05% poly-l-lysine coating for 5 min, followed by 0.15% alginate coating) and non-coated gels showed effective cell proliferation control, cell viability support and continuous delivery of bioactive glial cell-derived neurotrophic factor (GDNF) with no significant gel degradation in vitro and in rat vitreous.
36516686	4	59	part_of	AP1-	775:778	arg1	0.01% or 0.05% poly-l-lysine	AP1		0.01% or 0.05% poly-l-lysine		PUBTATOR	AminoAcid	AP1	24516	lysine	All optimised AP-coated gels (AP1- and AP5.5-CAC ECT: 2 mg/ml collagen, 1.5% high molecular weight alginate, 50,000 cells/gel, with 0.01% or 0.05% poly-l-lysine coating for 5 min, followed by 0.15% alginate coating) and non-coated gels showed effective cell proliferation control, cell viability support and continuous delivery of bioactive glial cell-derived neurotrophic factor (GDNF) with no significant gel degradation in vitro and in rat vitreous.
35797143	10	31	part_of	CS/ZnO-HSP	1641:1650	arg1	the CS/ZnO-HSP nanocomposites	CS		the CS/ZnO-HSP nanocomposites		PUBTATOR	Site	CS	1431	nanocomposites	The HSP increased the antioxidant capacity of both the ZnO-HSP particles and the CS/ZnO-HSP nanocomposites, reducing the toxic effects of ZnO nanoparticles.
36986193	4	41	gly	fucosylated	576:586	arg1	grouped fucosylated HMOs	grouped fucosylated HMOs				OGER		HMOs	P00540		In this preregistered longitudinal study, we investigated whether human milk 2'-fucosyllactose, 3'-sialyllactose, 6'-sialyllactose, grouped fucosylated HMOs, and grouped sialylated HMOs, assessed during the first twelve postnatal weeks, are associated with better child executive functions at age three years.
36986193	4	76	gly	sialylated	606:615	arg1	grouped sialylated HMOs	grouped sialylated HMOs				OGER		HMOs	P00540		In this preregistered longitudinal study, we investigated whether human milk 2'-fucosyllactose, 3'-sialyllactose, 6'-sialyllactose, grouped fucosylated HMOs, and grouped sialylated HMOs, assessed during the first twelve postnatal weeks, are associated with better child executive functions at age three years.
35853338	6	75	part_of	PMAL-CTS/MMT	1440:1451	arg1	the PMAL-CTS/MMT nanocomposite	CTS		the PMAL-CTS/MMT nanocomposite		PUBTATOR	Site	CTS	7276	nanocomposite	More importantly, the PMAL-CTS/MMT nanocomposite was successfully applied to separate the AY17 and BG dyes from real-life aquatic environments.