doc_id	sent_index	relation_id	relation	trigger	trigger_offset	arg_num	arg_base_np	arg_protein	arg_domain	arg_site	arg_sugar	PSource	SiteSource	NProtein	NID	SiteName	sent_text
35588979	3	16	gly	MSP-1	390:394	arg1	mannose	MSP-1			mannose	PUBTATOR		MSP-1	Q9BYE2		The monosaccharide composition of MSP-1 was mannose and glucose at a ratio of 1.00: 1.25.
35588979	3	16	gly	MSP-1	390:394	arg1	The monosaccharide composition	MSP-1			The monosaccharide composition	PUBTATOR		MSP-1	Q9BYE2		The monosaccharide composition of MSP-1 was mannose and glucose at a ratio of 1.00: 1.25.
36180658	5	67	gly	glycosylation	602:614	arg1	lamin A/C protein	lamin A/C protein				PUBTATOR		lamin A/C protein	4000		Based on this, we hypothesized that glycosylation of lamin A/C protein may be important in the regulation of the structural organization of the nuclear lamina during interphase and mitosis.
35637713	9	32	gly	had	1147:1149	arg1	CF-1 AND 19.80% carbohydrate moiety	CF-1			19.80% carbohydrate moiety	OGER		CF-1			CF-1, CF-2, CF-3, and CF-4 had respectively 15.67%, 42.41%, 5.44%, and 14.52% peptide moiety content and 38.92%, 50.70%, 93.76%, and 19.80% carbohydrate moiety.
37121414	3	39	gly	G-zein-P	430:437	arg1	zein/chicory polysaccharide nanoparticles	G-zein-P NPs			zein/chicory polysaccharide nanoparticles	OGER		G-zein-P NPs	P0C0P6		In this work, zein/chicory polysaccharide nanoparticles (G-zein-P NPs) were prepared by pH-induced antisolvent precipitation method for the encapsulation of genistein.
37156153	1	93	gly	attachment	349:358	arg2	PEG AND mannose	PEG			mannose	OGER		PEG	P09466		HYPOTHESIS Modification of polyallylamine hydrochloride (PAH) with heterobifunctional low molecular weight polyethylene glycol (PEG) (600 and 1395 Da), and subsequent attachment of mannose, glucose, or lactose sugars to PEG, can lead to formation of polyamine phosphate nanoparticles (PANs) with lectin binding affinity and narrow size distribution.
37156153	1	93	gly	attachment	349:358	arg2	PEG AND lactose sugars	PEG			lactose sugars	OGER		PEG	P09466		HYPOTHESIS Modification of polyallylamine hydrochloride (PAH) with heterobifunctional low molecular weight polyethylene glycol (PEG) (600 and 1395 Da), and subsequent attachment of mannose, glucose, or lactose sugars to PEG, can lead to formation of polyamine phosphate nanoparticles (PANs) with lectin binding affinity and narrow size distribution.
37156153	1	93	gly	attachment	349:358	arg2	PEG AND glucose	PEG			glucose	OGER		PEG	P09466		HYPOTHESIS Modification of polyallylamine hydrochloride (PAH) with heterobifunctional low molecular weight polyethylene glycol (PEG) (600 and 1395 Da), and subsequent attachment of mannose, glucose, or lactose sugars to PEG, can lead to formation of polyamine phosphate nanoparticles (PANs) with lectin binding affinity and narrow size distribution.
36381324	8	25	gly	glycosylation	882:894	arg1	SLAMF7	SLAMF7				PUBTATOR		SLAMF7	57823		Inhibition of STT3A by a small molecule inhibitor, N-linked glycosylation inhibitor-1 (NGI-1), reduced glycosylation of SLAMF7, resulting in enhancing antibody affinity and phagocytosis.
36180658	11	62	gly	protein	1419:1425	arg1	the glycan units	lamin A/C protein			the glycan units	PUBTATOR		lamin A/C protein	4000		Having found the glycan units of the lamin A/C protein suggests that glycosylation might have a role in the nuclear organization during the cell cycle.
36841391	7	41	gly	GLP	1309:1311	arg1	the monosaccharide compositions	GLP			the monosaccharide compositions	OGER		GLP	Q9NYA3		Moreover, PCE eliciting significantly altered the monosaccharide compositions of GLP with Gal, Man, GalA, GlcA, and Fuc increasing by 8.17 %, 5.68 %, 5.41 %, 2.66 %, and 1.51 % respectively, but Glc decreased by 23.43 %, which may result in the activity change.
35048917	1	10	gly	chain	334:338	arg1	the prevention	chain			the prevention	OGER		chain	4780		This study investigated the effects of PGPs (Pleurotus geesteranus polysaccharides), a glucopyranose isolated from the mycelium of Pleurotus geesteranus and characterized with the main chain of →4)-α-D-Glcp-(1→, on the prevention against alcohol liver diseases (ALD), with the aim of providing a theoretical basis for the application of P. geesteranus as prebiotic agents in preventing and treating gut dysbiosis and alcohol-related metabolic disorders in individuals with ALD.
35048917	1	21	gly	prevention	368:377	arg1	the main chain	chain			prevention	OGER		chain	4780		This study investigated the effects of PGPs (Pleurotus geesteranus polysaccharides), a glucopyranose isolated from the mycelium of Pleurotus geesteranus and characterized with the main chain of →4)-α-D-Glcp-(1→, on the prevention against alcohol liver diseases (ALD), with the aim of providing a theoretical basis for the application of P. geesteranus as prebiotic agents in preventing and treating gut dysbiosis and alcohol-related metabolic disorders in individuals with ALD.
36381324	7	36	gly	Hyperglycosylated	693:709	arg1	Hyperglycosylated SLAMF7	Hyperglycosylated SLAMF7				PUBTATOR		Hyperglycosylated SLAMF7	57823		Hyperglycosylated SLAMF7 was associated with STT3A expression in breast cancer cells.
35142368	6	95	gly	AAPs	1022:1025	arg1	The monosaccharide composition	AAPs			The monosaccharide composition	OGER		AAPs	P55786		The monosaccharide composition, molecular weight (AAP-M, AAP-D, and AAP-C were 1.03E+03 kDa, 1.76E+03 kDa, and 1.15E+03 kDa, respectively), and antioxidant activities of the three AAPs were different.
36402384	2	47	gly	derived	289:295	arg1	Sparassis crispa-1 AND A polysaccharide	crispa-1 (SCP-1			A polysaccharide	OGER		crispa-1 (SCP-1	P58466		A polysaccharide derived from Sparassis crispa-1 (SCP-1) acts as a neuroprotective agent in vitro.
36243163	4	43	gly	fragments	803:811	arg1	STP	STP			fragments	OGER		STP	P50225		Both homogalacturonan and arabinogalactan might exist as major polysaccharide fragments in STP.
35284830	4	0	gly	glycosylated	652:663	arg1	the glycosylated spike protein	the glycosylated spike protein				PUBTATOR		spike protein	43740568		Using experimental cryo-EM images, we present the energy landscape of the glycosylated spike protein, and identify the diversity of low-energy conformations in the vicinity of its open (so called 1RBD-up) state.
36137381	6	42	gly	PSPs	1018:1021	arg1	monosaccharide compositions	PSPs			monosaccharide compositions	OGER		PSPs	P05451		The molecular weights and monosaccharide compositions of PSPs were also determined.
35170609	4	68	gly	CYPB	589:592	arg1	the monosaccharide composition	CYPB			the monosaccharide composition	PUBTATOR		CYPB	P23284		The determination of the monosaccharide composition of CYPB with ion chromatography showed that CYPB was composed of rhamnose, glucose, arabinose, galactose, glucose, xylose and glucuronic acid with the ratio of 6 : 3.73 : 7.31 : 10.95 : 4.56 : 1.
36180658	8	8	gly	glycosylated	1068:1079	arg1	glycosylated lamin A/C protein	glycosylated lamin A/C protein				PUBTATOR		lamin A/C protein	4000		TEM studies also allowed us to observe the localization of glycosylated lamin A/C protein.
36381324	10	47	gly	Deglycosylation	1093:1107	arg1	SLAMF7	SLAMF7				PUBTATOR		SLAMF7	57823		Deglycosylation of SLAMF7 increases antibody recognition and promotes macrophage engulfment of breast cancer cells.
35552402	11	59	gly	CS	1764:1765	arg1	glucose-induced alterations	CS			glucose-induced alterations	PUBTATOR		CS	170587		Both RRMECs and retinas of diabetic rats exhibited glucose-induced alterations in the disaccharide compositions and sulfation of HS and CS, with the changes in sulfation including N,6-O-sulfation on HS and 4-O-sulfation on CS.
36061737	8	64	gly	changes	1299:1305	arg1	PSMA	PSMA			changes	PUBTATOR		PSMA	2346		This approach will form the basis of ongoing experiments to identify site-specific glycan changes in PSMA isolated from disease-stratified clinical samples to uncover targets that may be associated with disease progression and metastatic phenotypes.
36180658	6	34	gly	protein	798:804	arg1	the glycan units	lamin A/C protein			the glycan units	PUBTATOR		lamin A/C protein	4000		We analysed the glycan units of lamin A/C protein in lung carcinoma cells synchronized at G2/M and S phases via CapLC-ESI-MS/MS.
36890204	5	66	gly	N-glycosylation	601:615	arg1	rEPO	rEPO				Cterm		rEPO	P01588		In this study, we developed a bottom-up mass spectrometric method for profiling the site-specific N-glycosylation of rEPO.
36890204	0	20	gly	glycopeptides	68:80	arg1	recombinant erythropoietin	recombinant erythropoietin				PUBTATOR		erythropoietin	2056		Development and validation of a method for analyzing the sialylated glycopeptides of recombinant erythropoietin in urine using LC-HRMS.
37156153	5	17	gly	A	1184:1184	arg1	mannose modified PANs	concanavalin A			mannose modified PANs	Cterm		concanavalin A			SAXS and fluorescence cross-correlation spectroscopy were used to investigate the interaction of PANs with lectins: concanavalin A with mannose modified PANs, and jacalin with lactose modified ones.
36617628	10	91	gly	non-fucosylated	1540:1554	arg1	two non-fucosylated HMOs	two non-fucosylated HMOs				OGER		HMOs	P00540		However, we found the strongest evidence for microbiota associations between two non-fucosylated HMOs: 6'-sialyllactose (6'-SL) and lacto-N-hexaose (LNH), which were associated with lower and higher relative abundances of Bifidobacterium, respectively.
37168374	0	41	gly	fucosylation	9:20	arg1	haptoglobin	haptoglobin				OGER		haptoglobin	P00738		Terminal fucosylation of haptoglobin in cancer-derived exosomes during cholangiocarcinoma progression.
37168374	0	90	gly	haptoglobin	25:35	arg1	Terminal fucosylation	haptoglobin			Terminal fucosylation	OGER		haptoglobin	P00738		Terminal fucosylation of haptoglobin in cancer-derived exosomes during cholangiocarcinoma progression.
36617628	9	86	gly	fucosylated	1441:1451	arg1	certain fucosylated HMOs	certain fucosylated HMOs				OGER		HMOs	P00540		Four distinct groups of breast milk HMO compositions were evident, corresponding to maternal Secretor status and Lewis group combinations defined by the presence/absence of certain fucosylated HMOs.
36841391	5	4	gly	GLP	994:996	arg1	the monosaccharide components	GLP			the monosaccharide components	OGER		GLP	Q9NYA3		Differences in the biosynthetic pathway genes expressions and the monosaccharide components of GLP were further analyzed.
36381324	0	37	gly	Deglycosylation	0:14	arg1	SLAMF7	SLAMF7				PUBTATOR		SLAMF7	57823		Deglycosylation of SLAMF7 in breast cancers enhances phagocytosis.
35123651	5	12	gly	glycosylation	779:791	arg1	the gp41 subunit	the gp41 subunit				Cterm		gp41 subunit	100616444		A 9.1-Å sub-tomogram-averaged reconstruction of virion-bound Env in conjunction with structural mass spectrometry revealed unexpected features, including a variable central core of the gp41 subunit, heterogeneous glycosylation between protomers, and a flexible stalk that allows Env tilting and variable exposure of neutralizing epitopes.
36829569	6	18	gly	had	794:796	arg1	-Mgat1 AND oligomannose N-glycans	-Mgat1			oligomannose N-glycans	OGER		Mgat1	P26572		NB_1(-Mgat1) had the most oligomannose N-glycans and the greatest cell invasiveness, while NB_1(-Mgat2) had the fewest and least cell invasiveness.
36829569	6	18	gly	had	794:796	arg1	NB_1 AND oligomannose N-glycans	NB_1			oligomannose N-glycans	OGER		NB_1	Q8N6Q3		NB_1(-Mgat1) had the most oligomannose N-glycans and the greatest cell invasiveness, while NB_1(-Mgat2) had the fewest and least cell invasiveness.
35956965	3	26	gly	PCP	461:463	arg1	Polygonatum cyrtonema Hua polysaccharide	PCP			Polygonatum cyrtonema Hua polysaccharide	OGER		PCP	P42785		Polygonatum cyrtonema Hua polysaccharide (PCP 85-1-1) was separated by fractional precipitation and was purified by anion exchange and gel permeation chromatography.
35432728	14	14	gly	ABP	1338:1340	arg1	The monosaccharide content	ABP			The monosaccharide content	PUBTATOR		ABP	171571		The monosaccharide content of ABP included galacturonic acid (45.19%), galactose (36.63%), arabinose rhamnose (12.13%), and mannose (6.05%).
36660302	1	36	gly	glycosylated	190:201	arg1	κ-CN B	κ-CN B				PUBTATOR		-CN B	281728		In order to explore the functions of glycosylation of κ-Casein (κ-CN) in bovine milk, unglycosylated (UG) and twice glycosylated (2G) forms of κ-CN B were purified by selective precipitation followed by anion exchange chromatography from κ-CN BB milk and tested for their amyloid fibril formation and morphology, oligomerisation states and protein structure.
36660302	1	67	gly	unglycosylated	160:173	arg1	κ-CN B	κ-CN B				PUBTATOR		-CN B	281728		In order to explore the functions of glycosylation of κ-Casein (κ-CN) in bovine milk, unglycosylated (UG) and twice glycosylated (2G) forms of κ-CN B were purified by selective precipitation followed by anion exchange chromatography from κ-CN BB milk and tested for their amyloid fibril formation and morphology, oligomerisation states and protein structure.
36660302	1	82	gly	glycosylation	111:123	arg1	κ-Casein	κ-Casein				PUBTATOR		-Casein	281728		In order to explore the functions of glycosylation of κ-Casein (κ-CN) in bovine milk, unglycosylated (UG) and twice glycosylated (2G) forms of κ-CN B were purified by selective precipitation followed by anion exchange chromatography from κ-CN BB milk and tested for their amyloid fibril formation and morphology, oligomerisation states and protein structure.
36660302	1	82	gly	glycosylation	111:123	arg1	κ-CN	κ-CN				PUBTATOR		-CN	281728		In order to explore the functions of glycosylation of κ-Casein (κ-CN) in bovine milk, unglycosylated (UG) and twice glycosylated (2G) forms of κ-CN B were purified by selective precipitation followed by anion exchange chromatography from κ-CN BB milk and tested for their amyloid fibril formation and morphology, oligomerisation states and protein structure.
36789528	3	66	gly	Beet	324:327	arg1	a complex anionic polysaccharide	Beet			a complex anionic polysaccharide	Cterm		Beet			Beet pectin is a complex anionic polysaccharide, which can be adsorbed on the surface of liposomes to improve the flocculation resistance of liposomes.
35120456	4	54	gly	Sea	625:627	arg1	polysaccharide composition	Sea			polysaccharide composition	PUBTATOR		Sea	6395		RESULTS We investigated polysaccharide composition of nine seagrass species from the Mediterranean, Red Sea and eastern Indian Ocean.
37036808	2	25	gly	glycoproteins	248:260	arg1	SV2A	SV2A				OGER		SV2A	Q7L0J3		Asparagine (N)-linked glycosylation is required for delivery of the major SV glycoproteins synaptophysin and SV2A to SVs.
37036808	2	25	gly	glycoproteins	248:260	arg1	synaptophysin	synaptophysin				OGER		synaptophysin	P08247		Asparagine (N)-linked glycosylation is required for delivery of the major SV glycoproteins synaptophysin and SV2A to SVs.
37036808	2	47	gly	glycosylation	193:205	arg1	SV2A	SV2A				OGER		SV2A	Q7L0J3		Asparagine (N)-linked glycosylation is required for delivery of the major SV glycoproteins synaptophysin and SV2A to SVs.
37036808	2	47	gly	glycosylation	193:205	arg1	synaptophysin	synaptophysin				OGER		synaptophysin	P08247		Asparagine (N)-linked glycosylation is required for delivery of the major SV glycoproteins synaptophysin and SV2A to SVs.