doc_id	sent_index	relation_id	relation	trigger	trigger_offset	arg_num	arg_base_np	arg_protein	arg_domain	arg_site	arg_sugar	PSource	SiteSource	NProtein	NID	SiteName	sent_text
32381549	1	4	gly	found	156:160	arg2	ECM AND a critical proteoglycan	ECM			a critical proteoglycan	OGER		ECM	B2RPV6		Perlecan is a critical proteoglycan found in the extracellular matrix (ECM) of cartilage.
32890396	6	20	gly	glycoprotein	1105:1116	arg1	the spike glycoprotein	the spike glycoprotein				PUBTATOR		spike glycoprotein	43740568		In order to aid structure-based design and analysis of the spike glycoprotein, CoV3D permits visualization and download of spike structures with modeled N-glycosylation at known glycan sites, and contains structure-based classification of spike conformations, generated by unsupervised clustering.
33125406	4	5	gly	%	731:731	arg1	0% carbohydrate	90% fat, 10			0% carbohydrate	OGER		90% fat, 10	Q921A3		After male Wistar rats (8 weeks of age) were assigned randomly to a control group (CON) and a ketogenic diet group (KD), they were fed for 4 weeks respectively with a control diet (10% fat, 10% protein, 80% carbohydrate) and a ketogenic diet (90% fat, 10% protein, 0% carbohydrate).
33125406	4	92	gly	%	669:669	arg1	80% carbohydrate	10% fat, 10			80% carbohydrate	OGER		10% fat, 10	Q921A3		After male Wistar rats (8 weeks of age) were assigned randomly to a control group (CON) and a ketogenic diet group (KD), they were fed for 4 weeks respectively with a control diet (10% fat, 10% protein, 80% carbohydrate) and a ketogenic diet (90% fat, 10% protein, 0% carbohydrate).
34564432	2	27	gly	glycan-biomarkers	255:271	arg1	Tf	Tf			glycan-biomarkers	Cterm		Tf	P02787		Aim of this study is to explore glycan-biomarkers on transferrin (Tf) for Alzheimer's disease (AD) in cerebrospinal fluid (CSF).
34564432	2	27	gly	glycan-biomarkers	255:271	arg1	transferrin	transferrin			glycan-biomarkers	OGER		transferrin	P02787		Aim of this study is to explore glycan-biomarkers on transferrin (Tf) for Alzheimer's disease (AD) in cerebrospinal fluid (CSF).
32594109	10	11	gly	glycosylation	1451:1463	arg1	prothrombin	prothrombin				PUBTATOR		prothrombin	2147		Eight types of glycan were characterized in both groups, although generation of PIVKA-II in the warfarin-treated individuals did not lead to variation in glycosylation of prothrombin.
34564432	3	35	gly	Tf	377:378	arg1	Glycan structures	Tf			Glycan structures	Cterm		Tf	P02787		Glycan structures of CSF Tf were analyzed by ultra-performance liquid chromatography followed by mass spectrometry.
34108935	0	79	gly	Sex-Differences	32:46	arg1	Pancreatic Heparan Sulfate Glycosaminoglycans	Sex			Pancreatic Heparan Sulfate Glycosaminoglycans	OGER		Sex	P51805		Offspring of Obese Dams Exhibit Sex-Differences in Pancreatic Heparan Sulfate Glycosaminoglycans and Islet Insulin Secretion.
32422052	8	3	gly	contained	1138:1146	arg1	black eyed peas AND total soluble sugars	black eyed peas			total soluble sugars	OGER		peas	Q9BQ90		Yellow split beans, large lima, and black eyed peas contained higher amounts of total soluble sugars (79.8-83.6 mg/g), whereas lower amounts were observed in speckled butter peas and lentils (53.6-56.6 mg/g).
33407116	6	91	gly	glycosylated	1228:1239	arg1	significantly less glycosylated AGPs	significantly less glycosylated AGPs				OGER		AGPs	O00116		AGPs analysis of higher-order galt mutants (galt2 galt5, galt3 galt4 galt6, and galt2 galt3 galt4 galt5 gal6) demonstrated significantly less glycosylated AGPs in rosette leaves, stems, and siliques compared to the corresponding wild-type organs.
32766583	5	29	gly	glycosylation	621:633	arg1	the ACE2 receptor	the ACE2 receptor				PUBTATOR		ACE2 receptor	Q9BYF1		We further observed that glycosylation of the ACE2 receptor enhances SARS-CoV-2 infectivity.
33987106	0	65	gly	Lipopolysaccharide	112:129	arg1	Mice	Mice			Lipopolysaccharide	Cterm		Mice			Gut Microbiota Mediates the Preventive Effects of Dietary Capsaicin Against Depression-Like Behavior Induced by Lipopolysaccharide in Mice.
32083322	3	5	gly	Cel	705:707	arg1	glucose	Cel			glucose	OGER		Cel	P19835		Residuals of models obtained from the peaks of GP [0-8 h (GP-8), > 8-24 h (GP-24), > 24-48 h (GP-48) and > 24-81 h (GP-81)] of 0.02, 0.04, 0.08, 0.12 and 0.20 g of glucose (Glu), St and Cel respectively.
32673948	2	53	part_of	[VIm	511:514	arg1	dicationic N-vinylimidazole proline salt ([VIm]2C3[l-pro]2)	VIm		dicationic N-vinylimidazole proline salt ([VIm]2C3[l-pro]2)		OGER	SpecificSite	VIm	P08670	pro]2	After screening, it was found that the resulting membrane containing the IL of dicationic N-vinylimidazole proline salt ([VIm]2C3[l-pro]2) had the excellent performance for the enrichment of the target molecules.
34552909	4	11	gly	proteins	661:668	arg1	the GalNAc-type O-glycosylation pattern	S proteins			the GalNAc-type O-glycosylation pattern	Cterm		S proteins	43740568		Following digestion with trypsin and trypsin/Glu-C, and de-N-glycosylation using PNGase F, we determined the GalNAc-type O-glycosylation pattern of S proteins, including O-glycosites and the six most common O-glycans occupying them, via Byonic identification and manual validation.
34552909	4	64	gly	S	659:659	arg1	the six most common O-glycans	S proteins			the six most common O-glycans	Cterm		S proteins	43740568		Following digestion with trypsin and trypsin/Glu-C, and de-N-glycosylation using PNGase F, we determined the GalNAc-type O-glycosylation pattern of S proteins, including O-glycosites and the six most common O-glycans occupying them, via Byonic identification and manual validation.
34552909	4	74	gly	O-glycosylation	632:646	arg1	S proteins	S proteins				Cterm		S proteins	43740568		Following digestion with trypsin and trypsin/Glu-C, and de-N-glycosylation using PNGase F, we determined the GalNAc-type O-glycosylation pattern of S proteins, including O-glycosites and the six most common O-glycans occupying them, via Byonic identification and manual validation.
32162086	5	9	part_of	observed	965:972	arg2	PtNPs-GNPs-MWCNTs-β-CD/GCE AND R2 = 0.9942	PtNPs-GNPs-MWCNTs-β-CD/GCE		R2 = 0.9942		PUBTATOR	SpecificSite	-CD	65057	R2 	A good linear relationship (R2 = 0.9942) between peak current of cyclic voltammetry (CV) and FA concentration in the range 0.02-0.50 mmol L-1 was observed at PtNPs-GNPs-MWCNTs-β-CD/GCE.
32890396	5	0	gly	glycoprotein	847:858	arg1	the spike glycoprotein	the spike glycoprotein				PUBTATOR		spike glycoprotein	43740568		Integrated molecular viewers allow users to visualize structures of the spike glycoprotein, which is the major target of neutralizing antibodies and vaccine design efforts, as well as sets of spike-antibody complexes, spike sequence variability, and known polymorphisms.
34847186	3	66	gly	non-glycosylated	414:429	arg1	The FDA-approved human tissue plasminogen activator Reteplase	The FDA-approved human tissue plasminogen activator Reteplase				OGER		tissue plasminogen activator Reteplase	P00750		The FDA-approved human tissue plasminogen activator Reteplase (rPA) is a non-glycosylated protein produced in E. coli.
32663564	6	13	gly	FOS	1255:1257	arg1	total carbohydrate	FOS			total carbohydrate	OGER		FOS	P01100		Moreover, this inulinase was capable of hydrolyzing Cynara scolymus leaves into reducing sugar and 15 FOS with different DP, total carbohydrate, and protein content under different conditions designed by central composite design (CCD).
32148852	8	60	gly	glycosylated	1440:1451	arg1	native LAP	native LAP				PUBTATOR		LAP	Q9HC77		Although native LAP is heavily glycosylated, solution scattering experiments show that the overall folding and flexibility of unbound LAP are not influenced by glycan modification.
31972331	1	107	gly	glycosylated	110:121	arg1	Thyroglobulin	Thyroglobulin				PUBTATOR		Thyroglobulin	P01266		Thyroglobulin (TG), a large glycosylated protein secreted by thyrocytes into the thyroid follicular lumen, plays an essential role in thyroid hormone biosynthesis.
33244234	2	18	gly	P-glycoprotein	282:295	arg1	P-glycoprotein	P-glycoprotein				PUBTATOR		P-glycoprotein	5243		Multidrug resistance (MDR) in cancer is mainly caused by the high expression of P-glycoprotein encoded by the MDR1 gene, which is an ATP-dependent protease.
33599092	7	15	gly	IgG2	1320:1323	arg1	two galactose	IgG2			two galactose	OGER		IgG2	P01859		The changes of glycan features were elucidated by the exploration of individual glycopeptides, showing the biantennary fucosylated glycan without galactose (H3N4F1) or with two galactose (H5N4F1) of IgG1 and IgG2 could distinguish cancer group from both benign and control groups.
33599092	7	55	gly	IgG1	1311:1314	arg1	two galactose	IgG1			two galactose	OGER		IgG1	P01857		The changes of glycan features were elucidated by the exploration of individual glycopeptides, showing the biantennary fucosylated glycan without galactose (H3N4F1) or with two galactose (H5N4F1) of IgG1 and IgG2 could distinguish cancer group from both benign and control groups.
34552909	10	49	gly	O-glycoprotein	1689:1702	arg1	the SARS-CoV-2 S protein	the SARS-CoV-2 S protein				PUBTATOR		S protein	P04004		Our results reveal that the SARS-CoV-2 S protein is an O-glycoprotein; the O-glycosites and O-glycan compositions vary with the host cell type.
32965647	8	60	gly	activity	996:1003	arg1	the Xylt2-/-	Xylt2			activity	PUBTATOR		Xylt2	217119		Because the residual XylT activity in the Xylt2-/- is due to xylosyltransferase 1 (XylT1), these studies indicate that both XylT1 and XylT2 have important roles in PG biosynthesis and organ homeostasis.
32410075	4	8	gly	ECM	715:717	arg1	proteoglycans	ECM			proteoglycans	OGER		ECM	Q13201		In this study, a novel network model was developed to incorporate the combinatorial effect of lung tissue ECM constituents such as collagen, elastin and proteoglycans (PGs) and used to mimic the experimentally derived length-tension response of the tissue to uniaxial loading.