GlyGen Protein Dataset Release 2019_04
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* uniprot-proteome-9606-homo-sapiens-2019-04.nt.gz
* uniprot-proteome-10090-mus-musculus-2019-04.nt.gz
* uniprot-proteome-10116-rattus-norvegicus-2019-04.nt.gz


New in this release:
> Dataset for Rattus Norvegicus, taxId 10116
> up:evidence & up:source info for all annotations


Homo Sapiens Dataset inputs:
> Homo_sapiens.GRCh38.cds.all.fa from ftp://ftp.ensembl.org/pub/current_fasta/homo_sapiens/cds
> Homo_sapiens.GRCh38.pep.all.fa from ftp://ftp.ensembl.org/pub/current_fasta/homo_sapiens/pep
> UP000005640_9606_uniprot_proteome.rdf using UniProt website REST API in May 2019
> UP000005640_9606.coordinates.json using Proteins REST API in May 2019
> Isoform info using UniProt Java API in May 2019
> UP000005640_9606.fasta from UniProt Release 2019_04
> UP000005640_9606_additional.fasta from UniProt Release 2019_04


Mus Musculus Dataset inputs:
> Mus_musculus.GRCm38.cds.all.fa from ftp://ftp.ensembl.org/pub/current_fasta/mus_musculus/cds
> Mus_musculus.GRCm38.pep.all.fa from ftp://ftp.ensembl.org/pub/current_fasta/mus_musculus/pep
> UP000000589_10090_uniprot_proteome.rdf using UniProt website REST API in May 2019
> UP000000589_10090.coordinates.json using Proteins REST API in May 2019
> Isoform info using UniProt Java API in May 2019
> UP000000589_10090.fasta from UniProt Release 2019_04
> UP000000589_10090_additional.fasta from UniProt Release 2019_04


Rattus Norvegicus Dataset inputs:
> Rattus_norvegicus.Rnor_6.0.cds.all.fa.gz from ftp://ftp.ensembl.org/pub/current_fasta/rattus_norvegicus/cds
> Rattus_norvegicus.Rnor_6.0.pep.all.fa.gz from ftp://ftp.ensembl.org/pub/current_fasta/rattus_norvegicus/pep
> UP000002494_10116_uniprot_proteome.rdf using UniProt website REST API in May 2019
> UP000002494_10116.coordinates.json using Proteins REST API in May 2019
> Isoform info using UniProt Java API in May 2019
> UP000002494_10116.fasta from UniProt Release 2019_04
> UP000002494_10116_additional.fasta from UniProt Release 2019_04


Reaction info from Reactome: [https://reactome.org/download/current/]
> UniProt2ReactomeReactions.txt 
> reactome.graphdb.tgz (v68)


Common UniProt Supporting Datasets (2019_04):
> databases.rdf.xz   Databases that are linked to from uniprot.rdf.xz
> diseases.rdf.xz    Human diseases
> enzyme.rdf.xz      Enzyme classification
> go.owl.xz          Gene Ontology
> keywords.rdf.xz    Keywords
> locations.rdf.xz   Subcellular locations
> pathways.rdf.xz    Pathways
> taxonomy.rdf.xz    Organisms
> tissues.rdf.xz     Tissues