{"accession":"Q3U816","id":"Q3U816_MOUSE","proteinExistence":"Evidence at protein level","info":{"type":"TrEMBL","created":"2005-10-11","modified":"2017-10-25","version":97},"organism":{"taxonomy":10090,"names":[{"type":"scientific","value":"Mus musculus"},{"type":"common","value":"Mouse"}],"lineage":["Eukaryota","Metazoa","Chordata","Craniata","Vertebrata","Euteleostomi","Mammalia","Eutheria","Euarchontoglires","Glires","Rodentia","Myomorpha","Muroidea","Muridae","Murinae","Mus","Mus"]},"protein":{"submittedName":[{"fullName":{"value":"Oxidoreductase HTATIP2","evidences":[{"code":"ECO:0000313","source":{"name":"Ensembl","id":"ENSMUSP00000146858","url":"http://www.ensembl.org/id/ENSMUSP00000146858"}}]}}]},"gene":[{"name":{"value":"Htatip2","evidences":[{"code":"ECO:0000313","source":{"name":"Ensembl","id":"ENSMUSP00000146858","url":"http://www.ensembl.org/id/ENSMUSP00000146858"}},{"code":"ECO:0000313","source":{"name":"MGI","id":"MGI:1859271","url":"http://www.informatics.jax.org/marker/MGI:1859271"}}]}}],"features":[{"type":"SIGNAL","category":"MOLECULE_PROCESSING","description":"","begin":"1","end":"23","evidences":[{"code":"ECO:0000256","source":{"name":"SAM","id":"SignalP","url":"http://www.uniprot.org/help/sam"}}]},{"type":"CHAIN","category":"MOLECULE_PROCESSING","ftId":"PRO_5011098863","description":"","begin":"24","end":"275","evidences":[{"code":"ECO:0000256","source":{"name":"SAM","id":"SignalP","url":"http://www.uniprot.org/help/sam"}}]},{"type":"DOMAIN","category":"DOMAINS_AND_SITES","description":"Semialdhyde_dh","begin":"53","end":"154","evidences":[{"code":"ECO:0000259","source":{"name":"SMART","id":"SM00859","url":"http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00859"}}]}],"dbReferences":[{"type":"EMBL","id":"AC124775","properties":{"molecule type":"Genomic_DNA","status":"NOT_ANNOTATED_CDS"}},{"type":"EMBL","id":"AK151254","properties":{"molecule type":"mRNA","protein sequence ID":"BAE30243.1"}},{"type":"EMBL","id":"AK152418","properties":{"molecule type":"mRNA","protein sequence ID":"BAE31203.1"}},{"type":"RefSeq","id":"NP_001139522.1","properties":{"nucleotide sequence ID":"NM_001146050.1"}},{"type":"RefSeq","id":"NP_001139524.1","properties":{"nucleotide sequence ID":"NM_001146052.1"}},{"type":"RefSeq","id":"NP_001139525.1","properties":{"nucleotide sequence ID":"NM_001146053.1"}},{"type":"RefSeq","id":"NP_058561.2","properties":{"nucleotide sequence ID":"NM_016865.3"}},{"type":"UniGene","id":"Mm.20801"},{"type":"DNASU","id":"53415"},{"type":"Ensembl","id":"ENSMUST00000207895","properties":{"gene ID":"ENSMUSG00000039745","protein sequence ID":"ENSMUSP00000146858"}},{"type":"GeneID","id":"53415"},{"type":"UCSC","id":"uc009hbp.2","properties":{"organism name":"mouse"}},{"type":"CTD","id":"10553"},{"type":"MGI","id":"MGI:1859271","properties":{"gene designation":"Htatip2"}},{"type":"eggNOG","id":"KOG4039","properties":{"taxonomic scope":"Eukaryota"}},{"type":"eggNOG","id":"COG0702","properties":{"taxonomic scope":"LUCA"}},{"type":"GeneTree","id":"ENSGT00390000008184"},{"type":"HOGENOM","id":"HOG000258441"},{"type":"HOVERGEN","id":"HBG052833"},{"type":"OMA","id":"NFLYLQV"},{"type":"Proteomes","id":"UP000000589","properties":{"component":"Chromosome 7"}},{"type":"Bgee","id":"ENSMUSG00000039745"},{"type":"GO","id":"GO:0005829","properties":{"term":"C:cytosol","source":"IEA:Ensembl"}},{"type":"GO","id":"GO:0016020","properties":{"term":"C:membrane","source":"IEA:Ensembl"}},{"type":"GO","id":"GO:0005635","properties":{"term":"C:nuclear envelope","source":"IEA:Ensembl"}},{"type":"GO","id":"GO:0051287","properties":{"term":"F:NAD binding","source":"IEA:InterPro"}},{"type":"GO","id":"GO:0016620","properties":{"term":"F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","source":"IEA:InterPro"}},{"type":"GO","id":"GO:0051170","properties":{"term":"P:nuclear import","source":"IEA:Ensembl"}},{"type":"GO","id":"GO:0045765","properties":{"term":"P:regulation of angiogenesis","source":"IEA:Ensembl"}},{"type":"InterPro","id":"IPR016040","properties":{"entry name":"NAD(P)-bd_dom"}},{"type":"InterPro","id":"IPR036291","properties":{"entry name":"NAD(P)-bd_dom_sf"}},{"type":"InterPro","id":"IPR000534","properties":{"entry name":"Semialdehyde_DH_NAD-bd"}},{"type":"Pfam","id":"PF13460","properties":{"match status":"1","entry name":"NAD_binding_10"}},{"type":"SMART","id":"SM00859","properties":{"match status":"1","entry name":"Semialdhyde_dh"}},{"type":"SUPFAM","id":"SSF51735","properties":{"match status":"1","entry name":"SSF51735"}}],"keywords":[{"value":"Complete proteome","evidences":[{"code":"ECO:0000313","source":{"name":"Proteomes","id":"UP000000589","url":"http://www.uniprot.org/proteomes/UP000000589"}}]},{"value":"Proteomics identification","evidences":[{"code":"ECO:0000213","source":{"name":"EPD","id":"Q3U816","url":"ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/proteomics_mapping/README"}},{"code":"ECO:0000213","source":{"name":"MaxQB","id":"Q3U816","url":"ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/proteomics_mapping/README"}},{"code":"ECO:0000213","source":{"name":"PeptideAtlas","id":"Q3U816","url":"ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/proteomics_mapping/README"}}]},{"value":"Reference proteome","evidences":[{"code":"ECO:0000313","source":{"name":"Proteomes","id":"UP000000589","url":"http://www.uniprot.org/proteomes/UP000000589"}}]},{"value":"Signal","evidences":[{"code":"ECO:0000256","source":{"name":"SAM","id":"SignalP","url":"http://www.uniprot.org/help/sam"}}]}],"references":[{"citation":{"type":"journal article","publicationDate":"1999","title":"High-efficiency full-length cDNA cloning.","authors":["Carninci P.","Hayashizaki Y."],"publication":{"journalName":"Methods Enzymol."},"location":{"volume":"303","firstPage":"19","lastPage":"44"},"dbReferences":[{"type":"PubMed","id":"10349636"},{"type":"DOI","id":"10.1016/S0076-6879(99)03004-9"}]},"source":{"strain":[{"value":"C57BL/6J","evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]}],"tissue":[{"value":"Bone marrow","evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]}]},"scope":["NUCLEOTIDE SEQUENCE"],"evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]},{"citation":{"type":"journal article","publicationDate":"2000","title":"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.","authors":["Carninci P.","Shibata Y.","Hayatsu N.","Sugahara Y.","Shibata K.","Itoh M.","Konno H.","Okazaki Y.","Muramatsu M.","Hayashizaki Y."],"publication":{"journalName":"Genome Res."},"location":{"volume":"10","firstPage":"1617","lastPage":"1630"},"dbReferences":[{"type":"PubMed","id":"11042159"},{"type":"DOI","id":"10.1101/gr.145100"}]},"source":{"strain":[{"value":"C57BL/6J","evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]}],"tissue":[{"value":"Bone marrow","evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]}]},"scope":["NUCLEOTIDE SEQUENCE"],"evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]},{"citation":{"type":"journal article","publicationDate":"2000","title":"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.","authors":["Shibata K.","Itoh M.","Aizawa K.","Nagaoka S.","Sasaki N.","Carninci P.","Konno H.","Akiyama J.","Nishi K.","Kitsunai T.","Tashiro H.","Itoh M.","Sumi N.","Ishii Y.","Nakamura S.","Hazama M.","Nishine T.","Harada A.","Yamamoto R.","Matsumoto H.","Sakaguchi S.","Ikegami T.","Kashiwagi K.","Fujiwake S.","Inoue K.","Togawa Y.","Izawa M.","Ohara E.","Watahiki M.","Yoneda Y.","Ishikawa T.","Ozawa K.","Tanaka T.","Matsuura S.","Kawai J.","Okazaki Y.","Muramatsu M.","Inoue Y.","Kira A.","Hayashizaki Y."],"publication":{"journalName":"Genome Res."},"location":{"volume":"10","firstPage":"1757","lastPage":"1771"},"dbReferences":[{"type":"PubMed","id":"11076861"},{"type":"DOI","id":"10.1101/gr.152600"}]},"source":{"strain":[{"value":"C57BL/6J","evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]}],"tissue":[{"value":"Bone marrow","evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]}]},"scope":["NUCLEOTIDE SEQUENCE"],"evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]},{"citation":{"type":"journal article","publicationDate":"2001","title":"Functional annotation of a full-length mouse cDNA collection.","consortiums":["The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium"],"publication":{"journalName":"Nature"},"location":{"volume":"409","firstPage":"685","lastPage":"690"},"dbReferences":[{"type":"PubMed","id":"11217851"},{"type":"DOI","id":"10.1038/35055500"}]},"source":{"strain":[{"value":"C57BL/6J","evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]}],"tissue":[{"value":"Bone marrow","evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]}]},"scope":["NUCLEOTIDE SEQUENCE"],"evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]},{"citation":{"type":"journal article","publicationDate":"2002","title":"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.","consortiums":["The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team"],"publication":{"journalName":"Nature"},"location":{"volume":"420","firstPage":"563","lastPage":"573"},"dbReferences":[{"type":"PubMed","id":"12466851"},{"type":"DOI","id":"10.1038/nature01266"}]},"source":{"strain":[{"value":"C57BL/6J","evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]}],"tissue":[{"value":"Bone marrow","evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]}]},"scope":["NUCLEOTIDE SEQUENCE"],"evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]},{"citation":{"type":"submission","publicationDate":"MAR-2004","authors":["Arakawa T.","Carninci P.","Fukuda S.","Hashizume W.","Hayashida K.","Hori F.","Iida J.","Imamura K.","Imotani K.","Itoh M.","Kanagawa S.","Kawai J.","Kojima M.","Konno H.","Murata M.","Nakamura M.","Ninomiya N.","Nishiyori H.","Nomura K.","Ohno M.","Sakazume N.","Sano H.","Sasaki D.","Shibata K.","Shiraki T.","Tagami M.","Tagami Y.","Waki K.","Watahiki A.","Muramatsu M.","Hayashizaki Y."],"publication":{"submissionDatabase":"EMBL/GenBank/DDBJ databases"}},"source":{"strain":[{"value":"C57BL/6J","evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]}],"tissue":[{"value":"Bone marrow","evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]}]},"scope":["NUCLEOTIDE SEQUENCE"],"evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]},{"citation":{"type":"journal article","publicationDate":"2005","title":"The Transcriptional Landscape of the Mammalian Genome.","consortiums":["The FANTOM Consortium","Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)"],"publication":{"journalName":"Science"},"location":{"volume":"309","firstPage":"1559","lastPage":"1563"}},"source":{"strain":[{"value":"C57BL/6J","evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]}],"tissue":[{"value":"Bone marrow","evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]}]},"scope":["NUCLEOTIDE SEQUENCE"],"evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]},{"citation":{"type":"journal article","publicationDate":"2005","title":"Antisense Transcription in the Mammalian Transcriptome.","consortiums":["RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium"],"publication":{"journalName":"Science"},"location":{"volume":"309","firstPage":"1564","lastPage":"1566"},"dbReferences":[{"type":"PubMed","id":"16141073"},{"type":"DOI","id":"10.1126/science.1112009"}]},"source":{"strain":[{"value":"C57BL/6J","evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]}],"tissue":[{"value":"Bone marrow","evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]}]},"scope":["NUCLEOTIDE SEQUENCE"],"evidences":[{"code":"ECO:0000313","source":{"name":"EMBL","id":"BAE31203.1","url":"http://www.ebi.ac.uk/ena/data/view/BAE31203.1"}}]},{"citation":{"type":"journal article","publicationDate":"2009","title":"Lineage-specific biology revealed by a finished genome assembly of the mouse.","authors":["Church D.M.","Goodstadt L.","Hillier L.W.","Zody M.C.","Goldstein S.","She X.","Bult C.J.","Agarwala R.","Cherry J.L.","DiCuccio M.","Hlavina W.","Kapustin Y.","Meric P.","Maglott D.","Birtle Z.","Marques A.C.","Graves T.","Zhou S.","Teague B.","Potamousis K.","Churas C.","Place M.","Herschleb J.","Runnheim R.","Forrest D.","Amos-Landgraf J.","Schwartz D.C.","Cheng Z.","Lindblad-Toh K.","Eichler E.E.","Ponting C.P."],"publication":{"journalName":"PLoS Biol."},"location":{"volume":"7","firstPage":"E1000112","lastPage":"E1000112"},"dbReferences":[{"type":"PubMed","id":"19468303"},{"type":"DOI","id":"10.1371/journal.pbio.1000112"}]},"source":{"strain":[{"value":"C57BL/6J","evidences":[{"code":"ECO:0000313","source":{"name":"Ensembl","id":"ENSMUSP00000146858","url":"http://www.ensembl.org/id/ENSMUSP00000146858"}},{"code":"ECO:0000313","source":{"name":"Proteomes","id":"UP000000589","url":"http://www.uniprot.org/proteomes/UP000000589"}}]}]},"scope":["NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]"],"evidences":[{"code":"ECO:0000313","source":{"name":"Ensembl","id":"ENSMUSP00000146858","url":"http://www.ensembl.org/id/ENSMUSP00000146858"}},{"code":"ECO:0000313","source":{"name":"Proteomes","id":"UP000000589","url":"http://www.uniprot.org/proteomes/UP000000589"}}]},{"citation":{"type":"journal article","publicationDate":"2010","title":"A tissue-specific atlas of mouse protein phosphorylation and expression.","authors":["Huttlin E.L.","Jedrychowski M.P.","Elias J.E.","Goswami T.","Rad R.","Beausoleil S.A.","Villen J.","Haas W.","Sowa M.E.","Gygi S.P."],"publication":{"journalName":"Cell"},"location":{"volume":"143","firstPage":"1174","lastPage":"1189"},"dbReferences":[{"type":"PubMed","id":"21183079"},{"type":"DOI","id":"10.1016/j.cell.2010.12.001"}]},"scope":["IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]"],"evidences":[{"code":"ECO:0000213","source":{"name":"PubMed","id":"21183079","url":"http://www.ncbi.nlm.nih.gov/pubmed/21183079","alternativeUrl":"http://europepmc.org/abstract/MED/21183079"}}]},{"citation":{"type":"submission","publicationDate":"MAR-2016","consortiums":["Ensembl"],"publication":{"submissionDatabase":"UniProtKB"}},"source":{"strain":[{"value":"C57BL/6J","evidences":[{"code":"ECO:0000313","source":{"name":"Ensembl","id":"ENSMUSP00000146858","url":"http://www.ensembl.org/id/ENSMUSP00000146858"}}]}]},"scope":["IDENTIFICATION"],"evidences":[{"code":"ECO:0000313","source":{"name":"Ensembl","id":"ENSMUSP00000146858","url":"http://www.ensembl.org/id/ENSMUSP00000146858"}}]}],"sequence":{"version":1,"length":275,"mass":29966,"modified":"2005-10-11","sequence":"MLGPTVLGTVVAALVASMLLLQSGDEGSGAAPSMADKEALPKLREDFKMQNKSVFILGASGETGKVLLKEILGQNLFSKVTLIGRRKLTFEEEAYKNVNQEVVDFEKLDVYASAFQGHDVGFCCLGTTRSKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSRGADKSSSFLYLQVKGEVEAKVEELKFDRLSVFRPGVLLCDRQESRPGEWLARKFFGSLPDSWASGYAVPVVTVVRAMLNNLVSPSSGQMELLENKAILHLGKDRDVPKL"}}