#!/bin/bash  

# define resource
resource=biomarkerdb 

# add the time stamped folder
cd /data/projects/glygen/downloads/$resource/

new_dir=$(date +%Y_%m_%d)
mkdir $new_dir

# download files to new folder
cd /data/projects/glygen/downloads/$resource/$new_dir

wget -r -np -nd -A "biomarkers_*.tsv" https://data.biomarkerkb.org/ln2data/releases/data/current/reviewed/

# ask user the data version and record it
read -p "Which version is this data? " data_version
echo "Data version: $data_version" > /data/projects/glygen/downloads/$resource/$new_dir/README.txt

# update new folder permissions
chmod -R 775 /data/shared/glygen/downloads/$resource/$new_dir/

# create symbolic link
cd /data/projects/glygen/downloads/$resource/
rm current
ln -s $new_dir current

echo "Download Complete"