{
    "bcoid": "GLY_001375",
    "title": "Hamster Protein Isoform sequences (UniProtKB)",
    "description": "The Hamster Protein Isoform sequences (UniProtKB) dataset contains Cricetulus griseus [taxid:10029] protein ...",
    "filename_list": "hamster_protein_allsequences.fasta",
    "filename": "hamster_protein_allsequences.fasta",
    "filetype": "fasta",
    "categories": {
        "species": [
            "Cricetulus griseus"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "All Protein Sequences"
        ],
        "file_type": [
            "fasta"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ]
    },
    "iconfilename": "fasta_icon_all.png",
    "sampledata": {
        "type": "html",
        "data": "<pre>\n>tr|G3HJ68-1|G3HJ68_CRIGR Isoform 1 of Heterogeneous nuclear ribonucleoprotein M OS=Cricetulus griseus OX=10029 GN= PE=4 SV=1 CANONICAL=G3HJ68-1\nMAAGVEAAAEVAATEPKMEEERGAPCVPSGNGAPGPKGEGERPTQNEKRKEKNIKRGGNR\nFEPYTNPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFR\nMEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRARQKAGRLGSTVFVANLDYKVGWKK\nLKEVFSMAGVVVRADFLDDKDGKSRGIGTCNFRTVH\n\n\n>tr|G3HJ69-1|G3HJ69_CRIGR Isoform 1 of Olfactory receptor OS=Cricetulus griseus OX=10029 GN= PE=3 SV=1 CANONICAL=G3HJ69-1\nMEPQNMTWVSEFILLGFSQTQELQKLLFVVFLFVYITTVVGNILIMVTVTFDPRLDMPMY\nFLLRNLAVIDLSYSTVTCPKMLVDFFHEIKTISYQGCMAQIFFFHLLGGGTVFFLSVMAY\nDRYIAISRPLHYVSIMNTRLCVGLVVAAWVGGFLHSIVQLSLMLPLPFCGPNVLDNFYCD\nVPQVLRLACTDTSLLEFLMISNSGMLVLIWFLLLLVSYTVILVMLRSHSGQARRKAASTC\nTTHVIVVSMIFILCIYIYSRPFTPFPLDKAVSISYTVLTPMLNPMIYTLRNQEMQTAMKR\nLAKYLVLSKRDEL\n\n\n>tr|G3HJ60-1|G3HJ60_CRIGR Isoform 1 of Interleukin OS=Cricetulus griseus OX=10029 GN=Il15 PE=3 SV=1 CANONICAL=G3HJ60-1\nMRNKSISCYLCFLLNSHFLTEAGIHVFILGCVSVGLPKTEANWKDVISDLKYIESLIQSI\nHIDATLYTDSDFHPSCKVTAMNCFLLELRVILHEYSNERLSETVRNVIFLANSSLSSNKN\nITEYGCKECEELEEKDIKEFLQSFIRIVQMFINTS\n\n\n>tr|G3HJ61-1|G3HJ61_CRIGR Isoform 1 of F-box/WD repeat-containing protein 11 OS=Cricetulus griseus OX=10029 GN= PE=4 SV=1 CANONICAL=G3HJ61-1\nMKLYCTYTSAVTCSKDLSIAVLDMASTSDITLPSILVGHHAAVNVVDFDDKCIVSASGDR\nTIKMWSKSTEFVCTLNGHKQGIACLWYRDQLVVSGSSDNIIQLWDIECGAHLRGLEGHEE\nLV\n\n\n>tr|G3HJ62-1|G3HJ62_CRIGR Isoform 1 of Uncharacterized protein OS=Cricetulus griseus OX=10029 GN= PE=4 SV=1 CANONICAL=G3HJ62-1\nMEFFPKAYARGPSQLWLCSGTLLPTSCGPSRPALLTQTSVLSGTICRVFSFCPAILLRGS\nPLHPPRSSCEPLQLAVPRCFRCTSLHAAGTWPGQAQGEQRVRLPPPAGELDEDWILPLGR\nLSCPSN\n\n\n>tr|G3HJ63-1|G3HJ63_CRIGR Isoform 1 of Uncharacterized protein OS=Cricetulus griseus OX=10029 GN= PE=4 SV=1 CANONICAL=G3HJ63-1\nMRRKRRRRRRRRRKNKRRRRRNEKEEKQKEEEEEEEEKEKKKKKKKKKKKKKKKKKKKKK\nKKKKKKKKI\n\n\n>tr|G3HJ64-1|G3HJ64_CRIGR Isoform 1 of Zinc finger protein 330 OS=Cricetulus griseus OX=10029 GN= PE=3 SV=1 CANONICAL=G3HJ64-1\nMPKKKTGARKKAENRREREKQLRASRSTVDLAKHPCNASMECDKCQRRQKNRAFCYFCNS\nVQKLPICAQCGKTKCMMKSSDCVIKHAGVYSTGLAMVGAICDFCEAWVCHGRKCLSTHAC\nACPLTDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFEHQASCQVLEAETFKCVSCNR\nLGQHSCLRCKACFCDEHTRSKVFKQEKGKQPPCPKCGHETQETKDLSMSTRSLKFGRQTG\nGEEGDGASGYDAYWKNLSSDKYADTGYHDDEEEDEAEDEEEEEDGKDSDAESSDLFTSLN\nLGRTYASGYAHYEEQEN\n\n\n>tr|G3HJ65-1|G3HJ65_CRIGR Isoform 1 of Elongin-C OS=Cricetulus griseus OX=10029 GN= PE=3 SV=1 CANONICAL=G3HJ65-1\nMATEEVGTIKAMMSGPGQFAENETIEVNVREIHSHVLSKVCMYFTYKVRYTNSSTEIPEF\nPIAPEIALELLMALNFLDC\n\n\n>tr|G3HJ66-1|G3HJ66_CRIGR Isoform 1 of Transcription factor Sp3 OS=Cricetulus griseus OX=10029 GN= PE=4 SV=1 CANONICAL=G3HJ66-1\nMDSSDNSERTGERISPEVNETNADRDLFVPISSSSQLPVTIDSTGILQQNTNSLTTYSGQ\nVHSSDLQGNYIQLPVSEETQAQNIQVSTAQPVVQHLQLQDSQKPTSQAQIVQGITPQTIH\nGVQASGQNTSQQALQNLQLQLNPGTFLIQAQTVTPSGQITWQTFQVQGIQNLQNLQIQNT\nAAQEITLTPVQTLTLGQVEAGGALTPPSTPVSLSTGQLPNLQTVTVNSIDSTGIQLHPGE\nNDDRDQQYQEGKRLQRVACTCPNYKEGGGRGTNTGKKKQHIGHIPGCGKVYGKTSHLRAH\nLRWHSGERPFICNWMFCGKRFTRSDELQRHRRTHTGEKKFVCPECSKRFMRSDQLAKHIK\nTYQNKKKVIHSSSTVLASVEAGRDDKFITAGGTTLILANIQQGSVSRIGTVNTSATSNQD\nILTNTEIPLQLVTVSGNETMK\n\n\n</pre>"
    },
    "readme": "Name\n   - Hamster Protein Isoform sequences (UniProtKB)\n\nVersion\n   - v-2.9.1\n\nCreated on\n  - \n\nModified on\n   - \n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - Maria Martin [martin@ebi.ac.uk], Preethi Vasudev [pvasudev@ebi.ac.uk]\n\nChecksum\n   - \n\nUsability Domain\n   - The Hamster Protein Isoform sequences (UniProtKB) dataset contains Cricetulus griseus [taxid:10029] protein fasta sequences for the hamster isoform accessions from the UniProtKB database. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen.\n\nDescription Domain\n   Keywords\n   - protein isoform sequences\n   - fasta\n   - UniProtKB\n\n   Pipeline Steps\n   - Step-1: The script loads the UniProtKB fasta sequence for all hamster isoform accessions data from the triplestore containing triples from nt file and extracts it into a dataset in a fasta format\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-cricetulus-griseus.nt\n      URI: https:/data.glygen.org/ln2downloads/ebi/2025_05_20/uniprot-proteome-cricetulus-griseus.nt\n   Output Subdomain\n      Name: hamster_protein_allsequences.fasta\n      URI: https:/data.glygen.org/ln2releases/data/v-2.9.1/reviewed/hamster_protein_allsequences.fasta\n      Name: hamster_protein_allsequences.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.9.1/reviewed/hamster_protein_allsequences.stat.csv\n\nFields\n      Name: \"sequence\"\n     Description: \"Amino acid sequence\"\n      Unique Values: \"23891\"",
    "downloadurl": "/ln2data/releases/data/v-2.9.1/reviewed/hamster_protein_allsequences.fasta"
}