{
    "bcoid": "GLY_001103",
    "title": "Arabidopsis Proteoform Glycosylation Citations (UniProtKB)",
    "description": "The Arabidopsis Proteoform Glycosylation Citations (UniProtKB) dataset contains Arabidopsis thaliana ...",
    "filename_list": "arabidopsis_proteoform_citations_glycosylation_sites_uniprotkb.csv",
    "filename": "arabidopsis_proteoform_citations_glycosylation_sites_uniprotkb.csv",
    "filetype": "csv",
    "categories": {
        "species": [
            "Arabidopsis thaliana"
        ],
        "molecule": [
            "Proteoform"
        ],
        "tag": [
            "Protein Citations UniProtKB"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ]
    },
    "minitable": {
        "content": [
            [
                "Q9LDH0-1...",
                "Arabidopsis ..."
            ],
            [
                "Q9LDH0-1...",
                "Structural r..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "title..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "title"
                },
                {
                    "type": "string",
                    "label": "journal_name"
                },
                {
                    "type": "string",
                    "label": "publication_date"
                },
                {
                    "type": "string",
                    "label": "authors"
                },
                {
                    "type": "string",
                    "label": "xref_key"
                },
                {
                    "type": "string",
                    "label": "xref_id"
                },
                {
                    "type": "string",
                    "label": "src_xref_key"
                },
                {
                    "type": "string",
                    "label": "src_xref_id"
                },
                {
                    "type": "string",
                    "label": "glytoucan_ac"
                }
            ],
            [
                "Q9LDH0-1",
                "Arabidopsis thaliana beta1,2-xylosyltransferase: an unusual glycosyltransferase with the potential to act at multiple stages of the plant N-glycosylation pathway.",
                "The Biochemical journal",
                "2005-06-01",
                "Benc\u00far Peter, Steinkellner Herta, Svoboda Barbara, Mucha Jan, Strasser Richard, Kolarich Daniel, Hann Stephan, K\u00f6llensperger Gunda, Gl\u00f6ssl Josef, Altmann Friedrich, Mach Lukas",
                "protein_xref_pubmed",
                "15686448",
                "protein_xref_uniprotkb_gly",
                "Q9LDH0",
                ""
            ],
            [
                "Q9LDH0-1",
                "Structural requirements for Arabidopsis beta1,2-xylosyltransferase activity and targeting to the Golgi.",
                "The Plant journal : for cell and molecular biology",
                "2003-01",
                "Pagny S, Bouissonnie F, Sarkar M, Follet-Gueye M L, Driouich A, Schachter H, Faye L, Gomord V",
                "protein_xref_pubmed",
                "12943552",
                "protein_xref_uniprotkb_gly",
                "Q9LDH0",
                ""
            ]
        ]
    },
    "readme": "Name\n   - Arabidopsis Proteoform Glycosylation Citations (UniProtKB)\n\nVersion\n   - v-2.9.1\n\nCreated on\n  - 2021-06-03T16:32:02.053252\n\nModified on\n   - 2024-05-17T11:24:04.661Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The Arabidopsis Proteoform Glycosylation Citations (UniProtKB) dataset contains Arabidopsis thaliana [taxid:3702] citation details of the publications present in the dataset Arabidopsis Glycosylation Sites (UniProtKB) (https://data.glygen.org/GLY_000038).\n\nExecution Domain\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: all_blacklisted_pmids.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.9.1/compiled/all_blacklisted_pmids.csv\n      Name: arabidopsis_proteoform_glycosylation_sites_uniprotkb.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.9.1/reviewed/arabidopsis_proteoform_glycosylation_sites_uniprotkb.csv\n   Output Subdomain\n      Name: arabidopsis_proteoform_citations_glycosylation_sites_uniprotkb.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.9.1/reviewed/arabidopsis_proteoform_citations_glycosylation_sites_uniprotkb.csv\n      Name: arabidopsis_proteoform_citations_glycosylation_sites_uniprotkb.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.9.1/reviewed/arabidopsis_proteoform_citations_glycosylation_sites_uniprotkb.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\n     Description: \"\"\n      Unique Values: \"26\"\n      Name: \"title\"\n     Description: \"Title of the published article in the journal\"\n      Unique Values: \"28\"\n      Name: \"journal_name\"\n     Description: \"The name of the journal in which the article is published\"\n      Unique Values: \"20\"\n      Name: \"publication_date\"\n     Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n      Unique Values: \"27\"\n      Name: \"authors\"\n     Description: \"NA\"\n      Unique Values: \"28\"\n      Name: \"xref_key\"\n     Description: \"Source key associated to the  xref_id\"\n      Unique Values: \"1\"\n      Name: \"xref_id\"\n     Description: \"ID of the X-ref\"\n      Unique Values: \"28\"\n      Name: \"src_xref_key\"\n     Description: \"Source Xref  key\"\n      Unique Values: \"1\"\n      Name: \"src_xref_id\"\n     Description: \"Source X-ref ID\"\n      Unique Values: \"26\"\n      Name: \"glytoucan_ac\"\n     Description: \"Unique accession assigned to the registered glycan structure in GlyTouCan database\"\n      Unique Values: \"1\"",
    "downloadurl": "/ln2data/releases/data/v-2.9.1/reviewed/arabidopsis_proteoform_citations_glycosylation_sites_uniprotkb.csv"
}