{
    "bcoid": "GLY_000646",
    "title": "Fruitfly Protein Information (UniProtKB)",
    "description": "The Fruitfly Protein Information dataset contains Drosophila melanogaster [taxid:7227] UniProtKB canonical ...",
    "filename_list": "fruitfly_protein_info_uniprotkb.csv",
    "filename": "fruitfly_protein_info_uniprotkb.csv",
    "filetype": "csv",
    "categories": {
        "species": [
            "Drosophila melanogaster"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "Protein Information"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ]
    },
    "minitable": {
        "content": [
            [
                "Q8T452-1...",
                "Q8T452_DROME..."
            ],
            [
                "A2RVG5-1...",
                "A2RVG5_DROME..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "uniprotkb_id..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "uniprotkb_id"
                },
                {
                    "type": "string",
                    "label": "uniprotkb_protein_mass"
                },
                {
                    "type": "string",
                    "label": "uniprotkb_protein_length"
                }
            ],
            [
                "Q8T452-1",
                "Q8T452_DROME",
                "22014",
                "196"
            ],
            [
                "A2RVG5-1",
                "A2RVG5_DROME",
                "66975",
                "603"
            ]
        ]
    },
    "readme": "Name\n   - Fruitfly Protein Information (UniProtKB)\n\nVersion\n   - v-2.9.1\n\nCreated on\n  - 2022-08-30T16:19:56.970676\n\nModified on\n   - 2024-05-17T11:24:07.792Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - Maria Martin [martin@ebi.ac.uk], Preethi Vasudev [pvasudev@ebi.ac.uk]\n\nChecksum\n   - \n\nUsability Domain\n   - The Fruitfly Protein Information dataset contains Drosophila melanogaster [taxid:7227] UniProtKB canonical accessions with their UniProtKB entry [id/mnemonic] name and properties such as mass and length. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen.\n\nDescription Domain\n   Keywords\n   - UniProtKB entry id\n   - UniProtKB mnemonic name\n   - protein length\n   - protein mass\n\n   Pipeline Steps\n   - Step-1: The script loads the UniProtKB entry id/mnemonic name, protein mass and length for all canonical accessions from the triplestore containing triples from nt file and extracts it into a dataset as a csv format\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-drosophila-melanogaster.nt\n      URI: https:/data.glygen.org/ln2downloads/ebi/2025_05_20/uniprot-proteome-drosophila-melanogaster.nt\n   Output Subdomain\n      Name: fruitfly_protein_info_uniprotkb.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.9.1/reviewed/fruitfly_protein_info_uniprotkb.csv\n      Name: fruitfly_protein_info_uniprotkb.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.9.1/reviewed/fruitfly_protein_info_uniprotkb.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\n     Description: \"\"\n      Unique Values: \"13822\"\n      Name: \"uniprotkb_id\"\n     Description: \"The entry name or mnemonic identifier assigned to the protein accession that consists of up to 11 uppercase alphanumeric characters for UniProtKB/Swiss-Prot entry and up to 16 uppercase alphanumeric characters for UniProtKB/TrEMBL entry with a defined naming convention\"\n      Unique Values: \"13822\"\n      Name: \"uniprotkb_protein_mass\"\n     Description: \"Molecular Mass of the protein in Daltons (Da)\"\n      Unique Values: \"12957\"\n      Name: \"uniprotkb_protein_length\"\n     Description: \"Length of the protein sequence\"\n      Unique Values: \"1897\"",
    "downloadurl": "/ln2data/releases/data/v-2.9.1/reviewed/fruitfly_protein_info_uniprotkb.csv"
}