{
    "bcoid": "GLY_000003",
    "title": "Human EBI-UniProtKB NT file",
    "description": "The Human EBI-UniProtKB NT file contains proteome data for Homo sapiens [taxid:9606] from UniProtKB and ...",
    "filename_list": "human_protein_ntdata.nt",
    "filename": "human_protein_ntdata.nt",
    "filetype": "nt",
    "categories": {
        "species": [
            "Homo sapiens"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "EMBL-EBI-GlyGen-NT File"
        ],
        "file_type": [
            "nt"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ]
    },
    "iconfilename": "nt_icon_all.png",
    "sampledata": {
        "type": "text",
        "data": "<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.uniprot.org/core/Protein> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/version> \"78\"^^<http://www.w3.org/2001/XMLSchema#integer> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/created> \"2014-10-29\"^^<http://www.w3.org/2001/XMLSchema#date> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/modified> \"2025-04-02\"^^<http://www.w3.org/2001/XMLSchema#date> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/mnemonic> \"A0A087WZ06_HUMAN\" .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/reviewed> \"false\"^^<http://www.w3.org/2001/XMLSchema#boolean> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/existence> <http://purl.uniprot.org/core/Evidence_at_Protein_Level_Existence> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/organism> <http://purl.uniprot.org/taxonomy/9606> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/recommendedName> <http://purl.uniprot.org/uniprot/A0A087WZ06#SIP4D9FC5BB796127DF> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/encodedBy> <http://purl.uniprot.org/uniprot/A0A087WZ06#gene-MD520D0349AD0A0DDCAC1CCA3909A1708D3> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/sequence> <http://purl.uniprot.org/isoforms/A0A087WZ06-1> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/53> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/67> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/539> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/1267> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/1185> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/723> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0005737> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0005634> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0004676> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0004679> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0005524> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0004677> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0004694> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0044024> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0072371> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_1990244> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0035979> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0044025> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0140823> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0035175> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0044022> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0140855> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0035402> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0072354> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0140857> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0035403> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0044023> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0072518> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0004711> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0006915> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0035556> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.A0A087WZ06_up.classifiedWith_obo.GO_0051262> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/enzyme> <http://purl.uniprot.org/enzyme/2.7.11.1> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/prosite/PS50011> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/prosite/PS50951> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/pfam/PF00069> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/embl/AC016877#not-annotated-cds-A0A087WZ06> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/embl/AP002087#not-annotated-cds-A0A087WZ06> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/embl/AP003355#not-annotated-cds-A0A087WZ06> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/embl/AP003438#not-annotated-cds-A0A087WZ06> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/embl/AP003467#not-annotated-cds-A0A087WZ06> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/embl/AP003551#not-annotated-cds-A0A087WZ06> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/refseq/NP_001243242.1> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/alphafolddb/A0A087WZ06> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/smr/A0A087WZ06> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/massive/A0A087WZ06> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/peptideatlas/A0A087WZ06> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/antibodypedia/26075> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/dnasu/6788> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/geneid/6788> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/ucsc/uc010mbm.3> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/ctd/6788> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://identifiers.org/ncbigene/6788> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/hgnc/11406> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/veupathdb/HostDB:ENSG00000104375> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/genetree/ENSGT00940000154984> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.orthodb.org/odbgroup/8693905at2759> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/biogrid-orcs/6788> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/chitars/STK3> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/bgee/ENSG00000104375> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/expressionatlas/A0A087WZ06> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/cdd/cd21888> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/funfam/1.10.287.4270:FF:000001> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/funfam/3.30.200.20:FF:000410> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/funfam/4.10.170.10:FF:000002> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/1.10.287.4270> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/4.10.170.10> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/3.30.200.20> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/1.10.510.10> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR011009> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR024205> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR049568> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR036674> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR000719> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR017441> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR011524> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR050629> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/panther/PTHR48012:SF2> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/panther/PTHR48012> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/pfam/PF11629> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/supfam/SSF56112> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/prosite/PS00107> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/annotation> <http://purl.uniprot.org/uniprot/A0A087WZ06#SIPCD2C9FD8624D297E> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/annotation> <http://purl.uniprot.org/uniprot/A0A087WZ06#SIPA8491A54404F3A26> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/annotation> <http://purl.uniprot.org/uniprot/A0A087WZ06#SIP23BAB779BE7B57B4> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/annotation> <http://purl.uniprot.org/uniprot/A0A087WZ06#SIP450845716C95619A> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/annotation> <http://purl.uniprot.org/uniprot/A0A087WZ06#SIP26B44587F7D7A7C8> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/annotation> <http://purl.uniprot.org/uniprot/A0A087WZ06#SIPB36CB1163FF628A2> .\n<http://purl.uniprot.org/uniprot/A0A087WZ06> <http://purl.uniprot.org/core/citation> <http://purl.uniprot.org/citations/21406692> .\n"
    },
    "readme": "Name\n   - Human EBI-UniProtKB NT file\n\nVersion\n   - v-2.9.1\n\nCreated on\n  - 2019-01-23T17:21:05.869598\n\nModified on\n   - 2024-05-17T11:23:49.279Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - Maria Martin [martin@ebi.ac.uk], Preethi Vasudev [pvasudev@ebi.ac.uk]\n\nChecksum\n   - \n\nUsability Domain\n   - The Human EBI-UniProtKB NT file contains proteome data for Homo sapiens [taxid:9606] from UniProtKB and other EMBL-EBI resources as per the GlyGen specifications in the NT format. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen\n\nDescription Domain\n   Keywords\n   - NT\n   - proteome\n   - EMBL-EBI\n\n   Pipeline Steps\n   - Step-0: The NT file requires no processing after it is recieved from EMBL-EBI-UniProtKB\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-homo-sapiens.nt\n      URI: https:/data.glygen.org/ln2downloads/ebi/2025_05_20/uniprot-proteome-homo-sapiens.nt\n   Output Subdomain\n      Name: human_protein_ntdata.nt\n      URI: https:/data.glygen.org/ln2releases/data/v-2.9.1/reviewed/human_protein_ntdata.nt\n      Name: human_protein_ntdata.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.9.1/reviewed/human_protein_ntdata.stat.csv\n\nFields\n      Name: \"triple\"\n     Description: \"RDF triple\"\n      Unique Values: \"30591383\"",
    "downloadurl": "/ln2data/releases/data/v-2.9.1/reviewed/human_protein_ntdata.nt"
}
