{
    "object_id": "https://biocomputeobject.org/GLY_001443/v-2.9.1",
    "spec_version": "1.3.0",
    "etag": "f53239577eb7396e1d0eae3cdb3d1968",
    "provenance_domain": {
        "name": "Fruit fly Protein Citations (IEDB)",
        "version": "v-2.9.1",
        "license": "https://creativecommons.org/licenses/by/4.0/",
        "modified": "2025-07-30T15:32:29.285Z",
        "contributors": [
            {
                "name": "Jeet Vora",
                "affiliation": "The George Washington University",
                "email": "jeetvora@gwu.edu",
                "contribution": [
                    "createdBy"
                ]
            },
            {
                "name": "Robel Kahsay",
                "affiliation": "BioMuta - The George Washington University",
                "contribution": [
                    "importedFrom"
                ],
                "email": "rykahsay@gwu.edu"
            },
            {
                "name": "Karina Martinez",
                "affiliation": "The George Washington University",
                "contribution": [
                    "createdBy"
                ],
                "email": "karinamartinez@gwu.edu"
            },
            {
                "name": "Luke Johnson",
                "affiliation": "The George Washington University",
                "contribution": [
                    "createdBy"
                ],
                "email": "luke.johnson@email.gwu.edu"
            },
            {
                "name": "Urnisha Bhuiyan",
                "affiliation": "The George Washington University",
                "contribution": [
                    "createdBy"
                ],
                "email": "sbhuiyan28@email.gwu.edu"
            },
            {
                "name": "Cyrus Au-Yeung",
                "affiliation": "The George Washington University",
                "contribution": [
                    "createdBy"
                ],
                "email": "cyruschauyeung@gwu.edu"
            },
            {
                "name": "Kate Warner",
                "affiliation": "The George Washington University",
                "contribution": [
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                ],
                "email": "k.warner1@gwu.edu"
            },
            {
                "name": "Mariia Kim",
                "affiliation": "The George Washington University",
                "email": "maria.kim@gwu.edu",
                "contribution": [
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                ]
            }
        ]
    },
    "usability_domain": [
        "The Fruit fly Protein Citations (IEDB) dataset contains Drosophila melanogaster [taxid:7227] UniProtKB accessions mapped to publication information (PMID, title, journal name, publication, date, authors, and the corresponding IEDB accession). If you use this dataset provide proper attribution to IEDB, GlyGen and EBI-EMBL-UniProtKB.",
        "The Immune Epitope Database (IEDB) catalogs experimental data on antibody and T cell epitopes in the context of infectious disease, allergy, autoimmunity and transplantation."
    ],
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                "name": "make-protein-dataset.py",
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                "prerequisite": [],
                "output_list": []
            }
        ],
        "keywords": [
            "PMID",
            "journal",
            "citations",
            "authors",
            "PubMed",
            "IEDB"
        ]
    },
    "parametric_domain": [
        {
            "value": ""
        }
    ],
    "io_domain": {
        "output_subdomain": [
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                "mediatype": "csv",
                "uri": {
                    "uri": "https:/data.glygen.org/ln2releases/data/v-2.9.1/reviewed/fruitfly_protein_citations_iedb.csv",
                    "filename": "fruitfly_protein_citations_iedb.csv"
                }
            },
            {
                "mediatype": "csv",
                "uri": {
                    "uri": "https:/data.glygen.org/ln2releases/data/v-2.9.1/reviewed/fruitfly_protein_citations_iedb.stat.csv",
                    "filename": "fruitfly_protein_citations_iedb.stat.csv"
                }
            }
        ],
        "input_subdomain": [
            {
                "uri": {
                    "filename": "fruitfly_protein_iedb.csv",
                    "uri": "https:/data.glygen.org/ln2releases/data/v-2.9.1/reviewed/fruitfly_protein_iedb.csv"
                }
            }
        ]
    },
    "execution_domain": {
        "script": [
            {
                "uri": {
                    "uri": "https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py",
                    "filename": "make-protein-dataset.py"
                }
            }
        ],
        "script_driver": "manual",
        "software_prerequisites": [
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                "version": "2.7.5",
                "name": "Python",
                "uri": {
                    "uri": "https://www.python.org/download/releases/2.7.5/"
                }
            }
        ],
        "external_data_endpoints": [],
        "environment_variables": {}
    },
    "extension_domain": [
        {
            "extension_schema": "https://www.w3id.org/biocompute/extension_domain/1.2.0/dataset/dataset_extension.json",
            "dataset_extension": {
                "additional_license": {
                    "data_license": "https://creativecommons.org/licenses/by/4.0/",
                    "script_license": "https://www.gnu.org/licenses/gpl-3.0.en.html"
                },
                "dataset_categories": [
                    {
                        "category_value": "Drosophila melanogaster",
                        "category_name": "species"
                    },
                    {
                        "category_value": "Protein",
                        "category_name": "molecule"
                    },
                    {
                        "category_value": "Protein Citations",
                        "category_name": "tag"
                    },
                    {
                        "category_value": "csv",
                        "category_name": "file_type"
                    },
                    {
                        "category_value": "Reviewed",
                        "category_name": "status"
                    },
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                        "category_value": "internal",
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                ]
            }
        }
    ],
    "error_domain": {}
}