{ "glytoucan_ac": "G80920RR", "number_monosaccharides": 11, "number_monosaccharides_suffix": "", "mass": 1882.64, "mass_pme": 2373.19, "tool_support": { "gnome_glygen_oglycans": "no", "sandbox": "no", "gnome_glygen": "yes", "gnome": "yes", "gnome_glycotree_oglycans": "no", "pdb": "no", "gnome_glygen_nglycans": "yes", "gnome_glycotree_nglycans": "yes" }, "fully_determined": "", "missing_score": 10000, "glycan_type": "BaseComposition", "iupac": "", "wurcs": "WURCS=2.0/2,11,10/[uxxxxh_2*NCC/3=O][uxxxxh]/1-1-2-2-2-2-2-2-2-2-2/a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?", "glycoct": "RES 1b:x-HEX-x:x 2b:x-HEX-x:x 3b:x-HEX-x:x 4b:x-HEX-x:x 5b:x-HEX-x:x 6b:x-HEX-x:x 7b:x-HEX-x:x 8b:x-HEX-x:x 9b:x-HEX-x:x 10b:x-HEX-x:x 11s:n-acetyl 12b:x-HEX-x:x 13s:n-acetyl LIN 1:10d(2+1)11n 2:12d(2+1)13n", "inchi": "", "glycam": "", "smiles_isomeric": "", "inchi_key": {}, "byonic": "HexNAc(2)Hex(9) % 1882.64472141", "gwb": "", "species": [ { "taxid": 3702, "name": "Arabidopsis thaliana", "annotation_category": "subsumption", "evidence": [ { "database": "Subsumption", "id": "G60230HH", "url": "https://www.glygen.org/glycan/G60230HH" }, { "database": "Subsumption", "id": "G70101JE", "url": "https://www.glygen.org/glycan/G70101JE" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" }, { "taxid": 9913, "name": "Bos taurus", "annotation_category": "subsumption", "evidence": [ { "database": "Subsumption", "id": "G60230HH", "url": "https://www.glygen.org/glycan/G60230HH" }, { "database": "Subsumption", "id": "G70101JE", "url": "https://www.glygen.org/glycan/G70101JE" }, { "database": "Subsumption", "id": "G23949TZ", "url": "https://www.glygen.org/glycan/G23949TZ" }, { "database": "Subsumption", "id": "G48712ZJ", "url": "https://www.glygen.org/glycan/G48712ZJ" }, { "database": "Subsumption", "id": "G92042VQ", "url": "https://www.glygen.org/glycan/G92042VQ" }, { "database": "Subsumption", "id": "G93575MM", "url": "https://www.glygen.org/glycan/G93575MM" }, { "database": "Subsumption", "id": "G97455PT", "url": "https://www.glygen.org/glycan/G97455PT" }, { "database": "Subsumption", "id": "G98719SR", "url": "https://www.glygen.org/glycan/G98719SR" } ], "common_name": "Bovine", "glygen_name": "Bovine", "reference_species": "Bos taurus [9913]" }, { "taxid": 9031, "name": "Gallus gallus", "annotation_category": "subsumption", "evidence": [ { "database": "Subsumption", "id": "G60230HH", "url": "https://www.glygen.org/glycan/G60230HH" }, { "database": "Subsumption", "id": "G70101JE", "url": "https://www.glygen.org/glycan/G70101JE" }, { "database": "Subsumption", "id": "G92042VQ", "url": "https://www.glygen.org/glycan/G92042VQ" }, { "database": "Subsumption", "id": "G66998XX", "url": "https://www.glygen.org/glycan/G66998XX" }, { "database": "Subsumption", "id": "G81356NS", "url": "https://www.glygen.org/glycan/G81356NS" } ], "common_name": "Chicken", "glygen_name": "Chicken", "reference_species": "Gallus gallus [9031]" }, { "taxid": 7227, "name": "Drosophila melanogaster", "annotation_category": "subsumption", "evidence": [ { "database": "Subsumption", "id": "G60230HH", "url": "https://www.glygen.org/glycan/G60230HH" }, { "database": "Subsumption", "id": "G70101JE", "url": "https://www.glygen.org/glycan/G70101JE" }, { "database": "Subsumption", "id": "G48712ZJ", "url": "https://www.glygen.org/glycan/G48712ZJ" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" }, { "taxid": 9606, "name": "Homo sapiens", "annotation_category": "both", "evidence": [ { "database": "Subsumption", "id": "G60230HH", "url": "https://www.glygen.org/glycan/G60230HH" }, { "database": "Subsumption", "id": "G70101JE", "url": "https://www.glygen.org/glycan/G70101JE" }, { "database": "Subsumption", "id": "G48712ZJ", "url": "https://www.glygen.org/glycan/G48712ZJ" }, { "database": "Subsumption", "id": "G92042VQ", "url": "https://www.glygen.org/glycan/G92042VQ" }, { "database": "Subsumption", "id": "G93575MM", "url": "https://www.glygen.org/glycan/G93575MM" }, { "database": "Subsumption", "id": "G98719SR", "url": "https://www.glygen.org/glycan/G98719SR" }, { "database": "Subsumption", "id": "G95227SJ", "url": "https://www.glygen.org/glycan/G95227SJ" }, { "database": "DOI", "id": "10.1101/2023.09.13.557529", "url": "https://glygen.org/publication/DOI/10.1101/2023.09.13.557529" }, { "database": "GlyGen", "id": "GLY_000888", "url": "https://data.glygen.org/GLY_000888" }, { "database": "GPTwiki", "id": "G80920RR", "url": "https://edwardslab.bmcb.georgetown.edu/gptwiki/G80920RR" }, { "database": "GlyCosmos", "id": "G80920RR", "url": "https://glycosmos.org/glycans/show/G80920RR" }, { "database": "PDC", "id": "PDC000471", "url": "https://proteomic.datacommons.cancer.gov/pdc/study/PDC000471" }, { "database": "PubMed", "id": "23345538", "url": "https://glygen.org/publication/PubMed/23345538" }, { "database": "PubMed", "id": "29671580", "url": "https://glygen.org/publication/PubMed/29671580" }, { "database": "PubMed", "id": "29741879", "url": "https://glygen.org/publication/PubMed/29741879" }, { "database": "PubMed", "id": "30659065", "url": "https://glygen.org/publication/PubMed/30659065" }, { "database": "PubMed", "id": "32841605", "url": "https://glygen.org/publication/PubMed/32841605" }, { "database": "PubMed", "id": "34089345", "url": "https://glygen.org/publication/PubMed/34089345" }, { "database": "PubMed", "id": "37074911", "url": "https://glygen.org/publication/PubMed/37074911" }, { "database": "UniCarbKB", "id": "GLY_000341", "url": "http://data.glygen.org/GLY_000341" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" }, { "taxid": 10090, "name": "Mus musculus", "annotation_category": "both", "evidence": [ { "database": "Subsumption", "id": "G60230HH", "url": "https://www.glygen.org/glycan/G60230HH" }, { "database": "Subsumption", "id": "G70101JE", "url": "https://www.glygen.org/glycan/G70101JE" }, { "database": "Subsumption", "id": "G48712ZJ", "url": "https://www.glygen.org/glycan/G48712ZJ" }, { "database": "Subsumption", "id": "G92042VQ", "url": "https://www.glygen.org/glycan/G92042VQ" }, { "database": "DOI", "id": "10.1101/2023.09.13.557529", "url": "https://glygen.org/publication/DOI/10.1101/2023.09.13.557529" }, { "database": "GlyGen", "id": "GLY_000889", "url": "https://data.glygen.org/GLY_000889" }, { "database": "GlyCosmos", "id": "G80920RR", "url": "https://glycosmos.org/glycans/show/G80920RR" }, { "database": "PubMed", "id": "27966990", "url": "https://glygen.org/publication/PubMed/27966990" }, { "database": "PubMed", "id": "34106099", "url": "https://glygen.org/publication/PubMed/34106099" }, { "database": "UniCarbKB", "id": "GLY_000341", "url": "http://data.glygen.org/GLY_000341" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" }, { "taxid": 10116, "name": "Rattus norvegicus", "annotation_category": "both", "evidence": [ { "database": "Subsumption", "id": "G60230HH", "url": "https://www.glygen.org/glycan/G60230HH" }, { "database": "Subsumption", "id": "G70101JE", "url": "https://www.glygen.org/glycan/G70101JE" }, { "database": "Subsumption", "id": "G98719SR", "url": "https://www.glygen.org/glycan/G98719SR" }, { "database": "GlyCosmos", "id": "G80920RR", "url": "https://glycosmos.org/glycans/show/G80920RR" }, { "database": "PubMed", "id": "24090084", "url": "https://glygen.org/publication/PubMed/24090084" }, { "database": "PubMed", "id": "34106099", "url": "https://glygen.org/publication/PubMed/34106099" }, { "database": "UniCarbKB", "id": "GLY_000341", "url": "http://data.glygen.org/GLY_000341" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" }, { "taxid": 4932, "name": "Saccharomyces cerevisiae", "annotation_category": "subsumption", "evidence": [ { "database": "Subsumption", "id": "G60230HH", "url": "https://www.glygen.org/glycan/G60230HH" }, { "database": "Subsumption", "id": "G70101JE", "url": "https://www.glygen.org/glycan/G70101JE" }, { "database": "Subsumption", "id": "G92042VQ", "url": "https://www.glygen.org/glycan/G92042VQ" }, { "database": "Subsumption", "id": "G97455PT", "url": "https://www.glygen.org/glycan/G97455PT" }, { "database": "Subsumption", "id": "G81356NS", "url": "https://www.glygen.org/glycan/G81356NS" }, { "database": "Subsumption", "id": "G08755WX", "url": "https://www.glygen.org/glycan/G08755WX" }, { "database": "Subsumption", "id": "G18447KU", "url": "https://www.glygen.org/glycan/G18447KU" }, { "database": "Subsumption", "id": "G22018VM", "url": "https://www.glygen.org/glycan/G22018VM" }, { "database": "Subsumption", "id": "G26508HK", "url": "https://www.glygen.org/glycan/G26508HK" }, { "database": "Subsumption", "id": "G36581PT", "url": "https://www.glygen.org/glycan/G36581PT" }, { "database": "Subsumption", "id": "G39338NX", "url": "https://www.glygen.org/glycan/G39338NX" }, { "database": "Subsumption", "id": "G39578OU", "url": "https://www.glygen.org/glycan/G39578OU" }, { "database": "Subsumption", "id": "G58566YO", "url": "https://www.glygen.org/glycan/G58566YO" }, { "database": "Subsumption", "id": "G60464IB", "url": "https://www.glygen.org/glycan/G60464IB" }, { "database": "Subsumption", "id": "G66118UZ", "url": "https://www.glygen.org/glycan/G66118UZ" }, { "database": "Subsumption", "id": "G70670FB", "url": "https://www.glygen.org/glycan/G70670FB" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae [4932]" }, { "taxid": 9823, "name": "Sus scrofa", "annotation_category": "subsumption", "evidence": [ { "database": "Subsumption", "id": "G70101JE", "url": "https://www.glygen.org/glycan/G70101JE" }, { "database": "Subsumption", "id": "G23949TZ", "url": "https://www.glygen.org/glycan/G23949TZ" }, { "database": "Subsumption", "id": "G92042VQ", "url": "https://www.glygen.org/glycan/G92042VQ" }, { "database": "Subsumption", "id": "G93575MM", "url": "https://www.glygen.org/glycan/G93575MM" }, { "database": "Subsumption", "id": "G98719SR", "url": "https://www.glygen.org/glycan/G98719SR" }, { "database": "Subsumption", "id": "G30140II", "url": "https://www.glygen.org/glycan/G30140II" }, { "database": "Subsumption", "id": "G95227SJ", "url": "https://www.glygen.org/glycan/G95227SJ" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" }, { "taxid": 2697049, "name": "Severe acute respiratory syndrome coronavirus 2", "annotation_category": "both", "evidence": [ { "database": "Subsumption", "id": "G70101JE", "url": "https://www.glygen.org/glycan/G70101JE" }, { "database": "GlyCosmos", "id": "G80920RR", "url": "https://glycosmos.org/glycans/show/G80920RR" }, { "database": "PubMed", "id": "32363391", "url": "https://glygen.org/publication/PubMed/32363391" }, { "database": "PubMed", "id": "32366695", "url": "https://glygen.org/publication/PubMed/32366695" }, { "database": "PubMed", "id": "32518941", "url": "https://glygen.org/publication/PubMed/32518941" }, { "database": "PubMed", "id": "33064451", "url": "https://glygen.org/publication/PubMed/33064451" }, { "database": "PubMed", "id": "33077685", "url": "https://glygen.org/publication/PubMed/33077685" }, { "database": "PubMed", "id": "34004174", "url": "https://glygen.org/publication/PubMed/34004174" }, { "database": "UniCarbKB", "id": "GLY_000341", "url": "http://data.glygen.org/GLY_000341" } ], "common_name": "2019-nCoV", "glygen_name": "SARS-CoV-2", "reference_species": "Severe acute respiratory syndrome coronavirus 2 [2697049]" }, { "taxid": 10029, "name": "Cricetulus griseus", "annotation_category": "subsumption", "evidence": [ { "database": "Subsumption", "id": "G92042VQ", "url": "https://www.glygen.org/glycan/G92042VQ" } ], "common_name": "Chinese hamster", "glygen_name": "Hamster", "reference_species": "Cricetulus griseus [10029]" }, { "taxid": 10114, "name": "Rattus", "annotation_category": "subsumption", "evidence": [ { "database": "Subsumption", "id": "G92042VQ", "url": "https://www.glygen.org/glycan/G92042VQ" }, { "database": "Subsumption", "id": "G30140II", "url": "https://www.glygen.org/glycan/G30140II" } ], "common_name": "Rattus", "glygen_name": "Rattus", "reference_species": "Rattus [10114]" }, { "taxid": 63746, "name": "Hepatitis C virus (isolate H77)", "annotation_category": "direct", "evidence": [ { "database": "GlyCosmos", "id": "G80920RR", "url": "https://glycosmos.org/glycans/show/G80920RR" }, { "database": "GlyGen", "id": "GLY_000335", "url": "https://data.glygen.org/GLY_000335" }, { "database": "PubMed", "id": "18187336", "url": "https://glygen.org/publication/PubMed/18187336" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" }, { "taxid": 694009, "name": "Severe acute respiratory syndrome-related coronavirus", "annotation_category": "direct", "evidence": [ { "database": "GlyCosmos", "id": "G80920RR", "url": "https://glycosmos.org/glycans/show/G80920RR" }, { "database": "PubMed", "id": "33064451", "url": "https://glygen.org/publication/PubMed/33064451" }, { "database": "UniCarbKB", "id": "GLY_000341", "url": "http://data.glygen.org/GLY_000341" } ], "common_name": "SARS-CoV", "glygen_name": "HCoV-SARS", "reference_species": "Severe acute respiratory syndrome-related coronavirus [694009]" } ], "classification": [ { "type": { "name": "N-linked", "url": "" }, "subtype": { "name": "High mannose", "url": "" } }, { "type": { "name": "N-linked", "url": "" }, "subtype": { "name": "Monoantennary" } }, { "type": { "name": "N-linked", "url": "" }, "subtype": { "name": "Truncated" } } ], "enzyme": [], "crossref": [ { "id": "491917232", "url": "https://pubchem.ncbi.nlm.nih.gov/substance/491917232", "database": "PubChem Substance", "categories": [ "Chemical" ] }, { "id": "157634", "url": "https://www.ebi.ac.uk/chebi/searchId.do?chebiId=157634", "database": "ChEBI", "categories": [] }, { "id": "G80920RR", "url": "https://glytoucan.org/Structures/Glycans/G80920RR", "database": "GlyTouCan", "categories": [ "Glycomics" ] }, { "id": "G80920RR", "url": "https://gnome.glyomics.org/restrictions/GlyGen.StructureBrowser.html?focus=G80920RR", "database": "GNOme", "categories": [ "Ontology and Dictionary", "Glycomics" ] }, { "id": "G80920RR", "url": "https://edwardslab.bmcb.georgetown.edu/gptwiki/G80920RR", "database": "GPTwiki", "categories": [ "Glycoproteomics" ] }, { "id": "G80920RR", "url": "https://glycosmos.org/glycans/show/G80920RR", "database": "GlyCosmos", "categories": [ "Glycoproteomics", "Glycomics" ] } ], "glycoprotein": [], "publication": [ { "title": "Glycoproteomic analysis of the secretome of human endothelial cells.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013", "authors": "Yin X, Bern M, Xing Q, Ho J, Viner R, Mayr M", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000040", "url": "http://data.glygen.org/GLY_000040" }, { "database": "GlyTouCan", "id": "G80920RR", "url": "https://glytoucan.org/Structures/Glycans/G80920RR" } ], "reference": [ { "type": "PubMed", "id": "23345538", "url": "https://glygen.org/publication/PubMed/23345538" } ] }, { "title": "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "journal": "Analytical chemistry", "date": "2018", "authors": "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000040", "url": "http://data.glygen.org/GLY_000040" }, { "database": "GlyTouCan", "id": "G80920RR", "url": "https://glytoucan.org/Structures/Glycans/G80920RR" } ], "reference": [ { "type": "PubMed", "id": "29671580", "url": "https://glygen.org/publication/PubMed/29671580" } ] }, { "title": "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "journal": "Analytical chemistry", "date": "2018", "authors": "Hu Y, Shah P, Clark DJ, Ao M, Zhang H", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000040", "url": "http://data.glygen.org/GLY_000040" }, { "database": "GlyTouCan", "id": "G80920RR", "url": "https://glytoucan.org/Structures/Glycans/G80920RR" } ], "reference": [ { "type": "PubMed", "id": "29741879", "url": "https://glygen.org/publication/PubMed/29741879" } ] }, { "title": "Multi-isotype Glycoproteomic Characterization of Serum Antibody Heavy Chains Reveals Isotype- and Subclass-Specific N-Glycosylation Profiles.", "journal": "Molecular & cellular proteomics : MCP", "date": "2019", "authors": "Chandler KB, Mehta N, Leon DR, Suscovich TJ, Alter G, Costello CE", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000040", "url": "http://data.glygen.org/GLY_000040" }, { "database": "GlyTouCan", "id": "G80920RR", "url": "https://glytoucan.org/Structures/Glycans/G80920RR" } ], "reference": [ { "type": "PubMed", "id": "30659065", "url": "https://glygen.org/publication/PubMed/30659065" } ] }, { "title": "Virus-Receptor Interactions of Glycosylated SARS-CoV-2 Spike and Human ACE2 Receptor.", "journal": "Cell host & microbe", "date": "2020", "authors": "Zhao P, Praissman JL, Grant OC, Cai Y, Xiao T, Rosenbalm KE, Aoki K, Kellman BP, Bridger R, Barouch DH, Brindley MA, Lewis NE, Tiemeyer M, Chen B, Woods RJ, Wells L", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000040", "url": "http://data.glygen.org/GLY_000040" }, { "database": "GlyTouCan", "id": "G80920RR", "url": "https://glytoucan.org/Structures/Glycans/G80920RR" } ], "reference": [ { "type": "PubMed", "id": "32841605", "url": "https://glygen.org/publication/PubMed/32841605" } ] }, { "title": "Virus-Receptor Interactions of Glycosylated SARS-CoV-2 Spike and Human ACE2 Receptor", "journal": "Cell Host Microbe", "date": "2020", "authors": "Zhao P., Praissman J.L., Grant O.C., Cai Y., Xiao T., Rosenbalm K.E., Aoki K., Kellman B.P., Bridger R., Barouch D.H., Brindley M.A., Lewis N.E., Tiemeyer M., Chen B., Woods R.J., Wells L.", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000040", "url": "http://data.glygen.org/GLY_000040" } ], "reference": [ { "type": "DOI", "id": "10.1016/j.chom.2020.08.004", "url": "https://glygen.org/publication/DOI/10.1016/j.chom.2020.08.004" } ] }, { "title": "Tumor cells express pauci- and oligomannosidic N-glycans in glycoproteins recognized by the mannose receptor (CD206).", "journal": "Cellular and molecular life sciences : CMLS", "date": "2021", "authors": "Stavenhagen K, Laan LC, Gao C, Mehta AY, Heimburg-Molinaro J, Glickman JN, van Die I, Cummings RD", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000040", "url": "http://data.glygen.org/GLY_000040" }, { "database": "GlyTouCan", "id": "G80920RR", "url": "https://glytoucan.org/Structures/Glycans/G80920RR" } ], "reference": [ { "type": "PubMed", "id": "34089345", "url": "https://glygen.org/publication/PubMed/34089345" } ] }, { "title": "Tumor cells express pauci- and oligomannosidic N-glycans in glycoproteins recognized by the mannose receptor (CD206)", "journal": "Cell Mol Life Sci", "date": "2021", "authors": "Stavenhagen K., Laan L.C., Gao C., Mehta A.Y., Heimburg-Molinaro J., Glickman J.N., van Die I., Cummings R.D.", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000040", "url": "http://data.glygen.org/GLY_000040" } ], "reference": [ { "type": "DOI", "id": "10.1007/s00018-021-03863-1", "url": "https://glygen.org/publication/DOI/10.1007/s00018-021-03863-1" } ] }, { "title": "Site-Specific N-Glycosylation of Endothelial Cell Receptor Tyrosine Kinase VEGFR-2.", "journal": "Journal of proteome research", "date": "2017", "authors": "Chandler KB, Leon DR, Meyer RD, Rahimi N, Costello CE", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000041", "url": "http://data.glygen.org/GLY_000041" }, { "database": "GlyTouCan", "id": "G80920RR", "url": "https://glytoucan.org/Structures/Glycans/G80920RR" } ], "reference": [ { "type": "PubMed", "id": "27966990", "url": "https://glygen.org/publication/PubMed/27966990" } ] }, { "title": "N-Glycosylation in isolated rat nerve terminals.", "journal": "Molecular omics", "date": "2021", "authors": "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000221", "url": "http://data.glygen.org/GLY_000221" }, { "database": "GlyTouCan", "id": "G80920RR", "url": "https://glytoucan.org/Structures/Glycans/G80920RR" } ], "reference": [ { "type": "PubMed", "id": "34106099", "url": "https://glygen.org/publication/PubMed/34106099" } ] }, { "title": "N-Glycosylation in isolated rat nerve terminals", "journal": "Molecular Omics", "date": "2021", "authors": "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000221", "url": "http://data.glygen.org/GLY_000221" } ], "reference": [ { "type": "DOI", "id": "10.1039/D0MO00044B", "url": "https://glygen.org/publication/DOI/10.1039/D0MO00044B" } ] }, { "title": "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "journal": "Journal of proteome research", "date": "2013", "authors": "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000221", "url": "http://data.glygen.org/GLY_000221" }, { "database": "GlyTouCan", "id": "G80920RR", "url": "https://glytoucan.org/Structures/Glycans/G80920RR" } ], "reference": [ { "type": "PubMed", "id": "24090084", "url": "https://glygen.org/publication/PubMed/24090084" } ] }, { "title": "Comprehensive Analysis of the Glycan Complement of SARS-CoV-2 Spike Proteins Using Signature Ions-Triggered Electron-Transfer/Higher-Energy Collisional Dissociation (EThcD) Mass Spectrometry.", "journal": "Analytical chemistry", "date": "2020", "authors": "Wang D, Baudys J, Bundy JL, Solano M, Keppel T, Barr JR", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000628", "url": "http://data.glygen.org/GLY_000628" }, { "database": "UniCarbKB", "id": "GLY_000479", "url": "http://data.glygen.org/GLY_000479" }, { "database": "GlyTouCan", "id": "G80920RR", "url": "https://glytoucan.org/Structures/Glycans/G80920RR" } ], "reference": [ { "type": "PubMed", "id": "33064451", "url": "https://glygen.org/publication/PubMed/33064451" } ] }, { "title": "Comprehensive Analysis of the Glycan Complement of SARS-CoV-2 Spike Proteins Using Signature Ions-Triggered Electron-Transfer/Higher-Energy Collisional Dissociation (EThcD) Mass Spectrometry", "journal": "Anal. Chem.", "date": "2020", "authors": "Wang D., Baudys J., Bundy J.L., Solano M., Keppel T., Barr J.R.", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000628", "url": "http://data.glygen.org/GLY_000628" }, { "database": "UniCarbKB", "id": "GLY_000479", "url": "http://data.glygen.org/GLY_000479" } ], "reference": [ { "type": "DOI", "id": "10.1021/acs.analchem.0c03301", "url": "https://glygen.org/publication/DOI/10.1021/acs.analchem.0c03301" } ] }, { "title": "Mapping the SARS-CoV-2 spike glycoprotein-derived peptidome presented by HLA class II on dendritic cells.", "journal": "Cell reports", "date": "2021", "authors": "Parker R, Partridge T, Wormald C, Kawahara R, Stalls V, Aggelakopoulou M, Parker J, Powell Doherty R, Ariosa Morejon Y, Lee E, Saunders K, Haynes BF, Acharya P, Thaysen-Andersen M, Borrow P, Ternette N", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000479", "url": "http://data.glygen.org/GLY_000479" }, { "database": "GlyTouCan", "id": "G80920RR", "url": "https://glytoucan.org/Structures/Glycans/G80920RR" } ], "reference": [ { "type": "PubMed", "id": "34004174", "url": "https://glygen.org/publication/PubMed/34004174" } ] }, { "title": "Mapping the SARS-CoV-2 spike glycoprotein-derived peptidome presented by HLA class II on dendritic cells", "journal": "Cell Rep", "date": "2021", "authors": "Parker R., Partridge T., Wormald C., Kawahara R., Stalls V., Aggelakopoulou M., Parker J., Powell Doherty R., Ariosa Morejon Y., Lee E., Saunders K., Haynes B.F., Acharya P., Thaysen-Andersen M., Borrow P., Ternette N.", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000479", "url": "http://data.glygen.org/GLY_000479" } ], "reference": [ { "type": "DOI", "id": "10.1016/j.celrep.2021.109179", "url": "https://glygen.org/publication/DOI/10.1016/j.celrep.2021.109179" } ] }, { "title": "Site-specific N-glycosylation Characterization of Recombinant SARS-CoV-2 Spike Proteins.", "journal": "Molecular & cellular proteomics : MCP", "date": "2021", "authors": "Zhang Y, Zhao W, Mao Y, Chen Y, Wang S, Zhong Y, Su T, Gong M, Du D, Lu X, Cheng J, Yang H", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000479", "url": "http://data.glygen.org/GLY_000479" }, { "database": "GlyTouCan", "id": "G80920RR", "url": "https://glytoucan.org/Structures/Glycans/G80920RR" } ], "reference": [ { "type": "PubMed", "id": "33077685", "url": "https://glygen.org/publication/PubMed/33077685" } ] }, { "title": "Site-specific N-glycosylation Characterization of Recombinant SARS-CoV-2 Spike Proteins", "journal": "Mol Cell Proteomics", "date": "2021", "authors": "Zhang Y., Zhao W., Mao Y., Chen Y., Wang S., Zhong Y., Su T., Gong M., Du D., Lu X., Cheng J., Yang H.", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000479", "url": "http://data.glygen.org/GLY_000479" } ], "reference": [ { "type": "DOI", "id": "10.1074/mcp.RA120.002295", "url": "https://glygen.org/publication/DOI/10.1074/mcp.RA120.002295" } ] }, { "title": "Site-specific glycan analysis of the SARS-CoV-2 spike.", "journal": "Science (New York, N.Y.)", "date": "2020", "authors": "Watanabe Y, Allen JD, Wrapp D, McLellan JS, Crispin M", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000479", "url": "http://data.glygen.org/GLY_000479" }, { "database": "GlyTouCan", "id": "G80920RR", "url": "https://glytoucan.org/Structures/Glycans/G80920RR" } ], "reference": [ { "type": "PubMed", "id": "32366695", "url": "https://glygen.org/publication/PubMed/32366695" } ] }, { "title": "Site-specific glycan analysis of the SARS-CoV-2 spike", "journal": "Science", "date": "2020", "authors": "Watanabe Y., Allen J.D., Wrapp D., McLellan J.S., Crispin M.", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000479", "url": "http://data.glygen.org/GLY_000479" } ], "reference": [ { "type": "DOI", "id": "10.1126/science.abb9983", "url": "https://glygen.org/publication/DOI/10.1126/science.abb9983" } ] }, { "title": "Deducing the N- and O- glycosylation profile of the spike protein of novel coronavirus SARS-CoV-2.", "journal": "Glycobiology", "date": "2020", "authors": "Shajahan A, Supekar NT, Gleinich AS, Azadi P", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000479", "url": "http://data.glygen.org/GLY_000479" }, { "database": "GlyTouCan", "id": "G80920RR", "url": "https://glytoucan.org/Structures/Glycans/G80920RR" } ], "reference": [ { "type": "PubMed", "id": "32363391", "url": "https://glygen.org/publication/PubMed/32363391" } ] }, { "title": "Deducing the N- and O- glycosylation profile of the spike protein of novel coronavirus SARS-CoV-2", "journal": "bioRxiv", "date": "2020", "authors": "Shajahan A., Supekar N.T., Gleinich A.S., Azadi P.", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000479", "url": "http://data.glygen.org/GLY_000479" } ], "reference": [ { "type": "DOI", "id": "10.1101/2020.04.01.020966", "url": "https://glygen.org/publication/DOI/10.1101/2020.04.01.020966" } ] }, { "title": "Identification of 22 N-glycosites on spike glycoprotein of SARS-CoV-2 and accessible surface glycopeptide motifs: implications for vaccination and antibody therapeutics.", "journal": "Glycobiology", "date": "2020", "authors": "Zhou D, Tian X, Qi R, Peng C, Zhang W", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000479", "url": "http://data.glygen.org/GLY_000479" }, { "database": "GlyTouCan", "id": "G80920RR", "url": "https://glytoucan.org/Structures/Glycans/G80920RR" } ], "reference": [ { "type": "PubMed", "id": "32518941", "url": "https://glygen.org/publication/PubMed/32518941" } ] }, { "title": "Site-specific N-glycosylation Characterization of Recombinant SARS-CoV-2 Spike Proteins", "journal": "bioRxiv", "date": "2020", "authors": "Zhang Y., Zhao W., Mao Y., Chen Y., Wang S., Zhong Y., Su T., Gong M., Du D., Lu X., Cheng J., Yang H.", "evidence": [ { "database": "UniCarbKB", "id": "GLY_000479", "url": "http://data.glygen.org/GLY_000479" } ], "reference": [ { "type": "DOI", "id": "10.1101/2020.03.28.013276", "url": "https://glygen.org/publication/DOI/10.1101/2020.03.28.013276" } ] }, { "title": "Mass spectrometric characterization of glycosylation of hepatitis C virus E2 envelope glycoprotein reveals extended microheterogeneity of N-glycans.", "journal": "Journal of the American Society for Mass Spectrometry", "date": "2008", "authors": "Iacob RE, Perdivara I, Przybylski M, Tomer KB", "evidence": [ { "database": "Data Submission", "id": "GLY_000335", "url": "http://data.glygen.org/GLY_000335" }, { "database": "GlyTouCan", "id": "G80920RR", "url": "https://glytoucan.org/Structures/Glycans/G80920RR" } ], "reference": [ { "type": "PubMed", "id": "18187336", "url": "https://glygen.org/publication/PubMed/18187336" } ] }, { "title": "Integrated glycoproteomic characterization of clear cell renal cell carcinoma.", "journal": "Cell reports", "date": "2023-05-30", "authors": "Lih T Mamie, Cho Kyung-Cho, Schnaubelt Michael, Hu Yingwei, Zhang Hui", "evidence": [ { "database": "GlyTouCan", "id": "G80920RR", "url": "https://glytoucan.org/Structures/Glycans/G80920RR" }, { "database": "PDC", "id": "PDC000471", "url": "https://proteomic.datacommons.cancer.gov/pdc/study/PDC000471" } ], "reference": [ { "type": "PubMed", "id": "37074911", "url": "https://glygen.org/publication/PubMed/37074911" } ] }, { "title": "Deep quantitative glycoproteomics reveals gut microbiome induced remodeling of the brain glycoproteome", "journal": "bioRxiv", "date": "2023", "authors": "Potel C.M., Burtscher M.L., Garrido-Rodriguez M., Brauer-Nikonow A., Becher I., Typas A., Zimmermann M., Savitski M.", "evidence": [ { "database": "Data Submission", "id": "GLY_000888", "url": "http://data.glygen.org/GLY_000888" }, { "database": "GlyGen", "id": "GLY_000889", "url": "https://data.glygen.org/GLY_000889" } ], "reference": [ { "type": "DOI", "id": "10.1101/2023.09.13.557529", "url": "https://glygen.org/publication/DOI/10.1101/2023.09.13.557529" } ] } ], "residues": [], "composition": [ { "name": "6-Deoxy-Hexose", "residue": "dhex", "count": 0, "cid": "840", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/840" }, { "name": "Hexose", "residue": "hex", "count": 9, "cid": "206", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/206" }, { "name": "N-Acetylhexosamine", "residue": "hexnac", "count": 2, "cid": "899", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/899" }, { "name": "Hexuronic Acid", "residue": "hexa", "count": 0, "cid": "610", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/610" }, { "name": "2-Amino-2-Deoxy-Hexose", "residue": "hexn", "count": 0, "cid": "739", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/739" }, { "name": "N-Acetyl-Neuraminic Acid", "residue": "neuac", "count": 0, "cid": "439197", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439197" }, { "name": "N-Glycolyl-Neuraminic Acid", "residue": "neugc", "count": 0, "cid": "440001", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/440001" }, { "name": "Phosphate", "residue": "p", "count": 0, "cid": "1061", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1061" }, { "name": "Pentose", "residue": "pent", "count": 0, "cid": "229", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/229" }, { "name": "Sulfate", "residue": "s", "count": 0, "cid": "1117", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1117" }, { "name": "Other", "residue": "other", "count": 0 } ], "composition_expanded": [ { "name": "Alditol", "residue": "aldi", "count": 0 }, { "name": "6-Deoxy-Hexose", "residue": "dhex", "count": 0, "cid": "840", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/840" }, { "name": "6-Deoxy-Hexitol", "residue": "dhex+aldi", "count": 0 }, { "name": "L-Fucose", "residue": "fuc", "count": 0, "cid": "17106", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/17106" }, { "name": "L-Fucitol", "residue": "fuc+aldi", "count": 0, "cid": "445724", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/445724" }, { "name": "D-Galactose", "residue": "gal", "count": 0, "cid": "6036", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/6036" }, { "name": "D-Galactitol", "residue": "gal+aldi", "count": 0, "cid": "11850", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/11850" }, { "name": "N-Acetyl-D-galactosamine", "residue": "galnac", "count": 0, "cid": "35717", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/35717" }, { "name": "N-Acetylgalactosaminitol", "residue": "galnac+aldi", "count": 0, "cid": "165880", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/165880" }, { "name": "D-Galacturonic Acid", "residue": "gala", "count": 0, "cid": "439215", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439215" }, { "name": "D-Glucose", "residue": "glc", "count": 0, "cid": "5793", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/5793" }, { "name": "D-Glucitol", "residue": "glc+aldi", "count": 0, "cid": "5780", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/5780" }, { "name": "D-Glucuronic acid", "residue": "glca", "count": 0, "cid": "94715", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/94715" }, { "name": "D-Glucosamine", "residue": "glcn", "count": 0, "cid": "439213", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439213" }, { "name": "N-Acetyl-D-Glucosamine", "residue": "glcnac", "count": 0, "cid": "439174", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439174" }, { "name": "N-Acetyl-D-glucosaminitol", "residue": "glcnac+aldi", "count": 0, "cid": "165206", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/165206" }, { "name": "Hexose", "residue": "hex", "count": 9, "cid": "206", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/206" }, { "name": "N-Acetylhexosamine", "residue": "hexnac", "count": 2, "cid": "899", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/899" }, { "name": "Hexuronic Acid", "residue": "hexa", "count": 0, "cid": "610", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/610" }, { "name": "2-Amino-2-Deoxy-Hexose", "residue": "hexn", "count": 0, "cid": "739", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/739" }, { "name": "Hexitol", "residue": "hex+aldi", "count": 0, "cid": "453", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/453" }, { "name": "N-Acetylhexosaminitol", "residue": "hexnac+aldi", "count": 0 }, { "name": "L-Iduronic acid", "residue": "idoa", "count": 0, "cid": "441039", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/441039" }, { "name": "D-Mannose", "residue": "man", "count": 0, "cid": "18950", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/18950" }, { "name": "D-Mannitol", "residue": "man+aldi", "count": 0, "cid": "6251", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/6251" }, { "name": "N-Acetyl-D-mannosamine", "residue": "mannac", "count": 0, "cid": "439281", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439281" }, { "name": "Methyl", "residue": "me", "count": 0 }, { "name": "N-Acetyl-Neuraminic Acid", "residue": "neuac", "count": 0, "cid": "439197", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439197" }, { "name": "N-Glycolyl-Neuraminic Acid", "residue": "neugc", "count": 0, "cid": "440001", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/440001" }, { "name": "Phosphate", "residue": "p", "count": 0, "cid": "1061", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1061" }, { "name": "Pentose", "residue": "pent", "count": 0, "cid": "229", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/229" }, { "name": "Sulfate", "residue": "s", "count": 0, "cid": "1117", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1117" }, { "name": "Sialic acid", "residue": "sia", "count": 0 }, { "name": "Other", "residue": "other", "count": 0 }, { "name": "Floating substituent", "residue": "x", "count": 0 }, { "name": "D-Xylose", "residue": "xyl", "count": 0, "cid": "135191", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/135191" }, { "name": "Ketodeoxynononic acid", "residue": "kdn", "count": 0, "cid": "13991616", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/13991616" } ], "motifs": [], "interactions": [], "expression": [], "subsumption": [ { "related_accession": "G80920RR", "relationship": "basecomposition" }, { "related_accession": "G00247JV", "relationship": "descendant" }, { "related_accession": "G00484DO", "relationship": "descendant" }, { "related_accession": "G00798PL", "relationship": "descendant" }, { "related_accession": "G00876GU", "relationship": "descendant" }, { "related_accession": "G00883PZ", "relationship": "descendant" }, { "related_accession": "G01063DC", "relationship": "descendant" }, { "related_accession": "G01096QY", "relationship": "descendant" }, { "related_accession": "G03019FG", "relationship": "descendant" }, { "related_accession": "G03056DW", "relationship": "descendant" }, { "related_accession": "G03272CA", "relationship": "descendant" }, { "related_accession": "G03964XM", "relationship": "descendant" }, { "related_accession": "G04383CF", "relationship": "descendant" }, { "related_accession": "G04977HM", "relationship": "descendant" }, { "related_accession": "G05022LU", "relationship": "descendant" }, { "related_accession": "G05479GT", "relationship": "descendant" }, { "related_accession": "G05693UB", "relationship": "descendant" }, { "related_accession": "G05945XE", "relationship": "descendant" }, { "related_accession": "G06054EC", "relationship": "descendant" }, { "related_accession": "G06833NJ", "relationship": "descendant" }, { "related_accession": "G07473GL", "relationship": "descendant" }, { "related_accession": "G07569NS", "relationship": "descendant" }, { "related_accession": "G07604MU", "relationship": "descendant" }, { "related_accession": "G07877YZ", "relationship": "descendant" }, { "related_accession": "G08342QX", "relationship": "descendant" }, { "related_accession": "G08755WX", "relationship": "descendant" }, { "related_accession": "G08910CE", "relationship": "descendant" }, { "related_accession": "G09064IP", "relationship": "descendant" }, { "related_accession": "G09639SZ", "relationship": "descendant" }, { "related_accession": "G10400OX", "relationship": "descendant" }, { "related_accession": "G10410QZ", "relationship": "descendant" }, { "related_accession": "G10474JO", "relationship": "descendant" }, { "related_accession": "G10700RM", "relationship": "descendant" }, { "related_accession": "G10987MU", "relationship": "descendant" }, { "related_accession": "G11176VR", "relationship": "descendant" }, { "related_accession": "G11414XN", "relationship": "descendant" }, { "related_accession": "G12476VI", "relationship": "descendant" }, { "related_accession": "G13847GJ", "relationship": "descendant" }, { "related_accession": "G13948XD", "relationship": "descendant" }, { "related_accession": "G14351DY", "relationship": "descendant" }, { "related_accession": "G14631XO", "relationship": "descendant" }, { "related_accession": "G15321UA", "relationship": "descendant" }, { "related_accession": "G15654RT", "relationship": "descendant" }, { "related_accession": "G16555UX", "relationship": "descendant" }, { "related_accession": "G16780SM", "relationship": "descendant" }, { "related_accession": "G16879YK", "relationship": "descendant" }, { "related_accession": "G17514KE", "relationship": "descendant" }, { "related_accession": "G17595XL", "relationship": "descendant" }, { "related_accession": "G17639DA", "relationship": "descendant" }, { "related_accession": "G18447KU", "relationship": "descendant" }, { "related_accession": "G18594JZ", "relationship": "descendant" }, { "related_accession": "G19659TZ", "relationship": "descendant" }, { "related_accession": "G20463HA", "relationship": "descendant" }, { "related_accession": "G21355NT", "relationship": "descendant" }, { "related_accession": "G21581RQ", "relationship": "descendant" }, { "related_accession": "G22018VM", "relationship": "descendant" }, { "related_accession": "G22121MK", "relationship": "descendant" }, { "related_accession": "G22428GQ", "relationship": "descendant" }, { "related_accession": "G22952TB", "relationship": "descendant" }, { "related_accession": "G23949TZ", "relationship": "descendant" }, { "related_accession": "G24275AM", "relationship": "descendant" }, { "related_accession": "G24968XB", "relationship": "descendant" }, { "related_accession": "G26246UB", "relationship": "descendant" }, { "related_accession": "G26391HA", "relationship": "descendant" }, { "related_accession": "G26414KI", "relationship": "descendant" }, { "related_accession": "G26508HK", "relationship": "descendant" }, { "related_accession": "G27715KK", "relationship": "descendant" }, { "related_accession": "G27854PW", "relationship": "descendant" }, { "related_accession": "G28615QI", "relationship": "descendant" }, { "related_accession": "G28855FB", "relationship": "descendant" }, { "related_accession": "G29694LZ", "relationship": "descendant" }, { "related_accession": "G30140II", "relationship": "descendant" }, { "related_accession": "G30517YN", "relationship": "descendant" }, { "related_accession": "G31341DQ", "relationship": "descendant" }, { "related_accession": "G31773TP", "relationship": "descendant" }, { "related_accession": "G32780LD", "relationship": "descendant" }, { "related_accession": "G33586CG", "relationship": "descendant" }, { "related_accession": "G34028QA", "relationship": "descendant" }, { "related_accession": "G34220QA", "relationship": "descendant" }, { "related_accession": "G34418IH", "relationship": "descendant" }, { "related_accession": "G34568LU", "relationship": "descendant" }, { "related_accession": "G35050EV", "relationship": "descendant" }, { "related_accession": "G35794UW", "relationship": "descendant" }, { "related_accession": "G36207NM", "relationship": "descendant" }, { "related_accession": "G36581PT", "relationship": "descendant" }, { "related_accession": "G38488ZJ", "relationship": "descendant" }, { "related_accession": "G39338NX", "relationship": "descendant" }, { "related_accession": "G39578OU", "relationship": "descendant" }, { "related_accession": "G39617JJ", "relationship": "descendant" }, { "related_accession": "G39687WG", "relationship": "descendant" }, { "related_accession": "G39892HW", "relationship": "descendant" }, { "related_accession": "G40352EF", "relationship": "descendant" }, { "related_accession": "G40510IW", "relationship": "descendant" }, { "related_accession": "G41223KV", "relationship": "descendant" }, { "related_accession": "G41339IY", "relationship": "descendant" }, { "related_accession": "G41592RO", "relationship": "descendant" }, { "related_accession": "G41771ES", "relationship": "descendant" }, { "related_accession": "G42133QN", "relationship": "descendant" }, { "related_accession": "G42299NR", "relationship": "descendant" }, { "related_accession": "G42403ST", "relationship": "descendant" }, { "related_accession": "G43357XR", "relationship": "descendant" }, { "related_accession": "G44306ED", "relationship": "descendant" }, { "related_accession": "G44541MM", "relationship": "descendant" }, { "related_accession": "G44910OJ", "relationship": "descendant" }, { "related_accession": "G45127WJ", "relationship": "descendant" }, { "related_accession": "G45137VE", "relationship": "descendant" }, { "related_accession": "G45290DI", "relationship": "descendant" }, { "related_accession": "G46015AV", "relationship": "descendant" }, { "related_accession": "G46559US", "relationship": "descendant" }, { "related_accession": "G46584GY", "relationship": "descendant" }, { "related_accession": "G46962DC", "relationship": "descendant" }, { "related_accession": "G47552PT", "relationship": "descendant" }, { "related_accession": "G48350AZ", "relationship": "descendant" }, { "related_accession": "G48712ZJ", "relationship": "descendant" }, { "related_accession": "G49504RV", "relationship": "descendant" }, { "related_accession": "G51369CD", "relationship": "descendant" }, { "related_accession": "G52029XN", "relationship": "descendant" }, { "related_accession": "G52639FF", "relationship": "descendant" }, { "related_accession": "G52993PA", "relationship": "descendant" }, { "related_accession": "G54548RK", "relationship": "descendant" }, { "related_accession": "G54642SQ", "relationship": "descendant" }, { "related_accession": "G54779CI", "relationship": "descendant" }, { "related_accession": "G55086SI", "relationship": "descendant" }, { "related_accession": "G55315HS", "relationship": "descendant" }, { "related_accession": "G55423YK", "relationship": "descendant" }, { "related_accession": "G55743FT", "relationship": "descendant" }, { "related_accession": "G56009WO", "relationship": "descendant" }, { "related_accession": "G56017FW", "relationship": "descendant" }, { "related_accession": "G56202TA", "relationship": "descendant" }, { "related_accession": "G56224WF", "relationship": "descendant" }, { "related_accession": "G56690OG", "relationship": "descendant" }, { "related_accession": "G57056FS", "relationship": "descendant" }, { "related_accession": "G57292SX", "relationship": "descendant" }, { "related_accession": "G57595UE", "relationship": "descendant" }, { "related_accession": "G57735SE", "relationship": "descendant" }, { "related_accession": "G57902SX", "relationship": "descendant" }, { "related_accession": "G57989AD", "relationship": "descendant" }, { "related_accession": "G58566YO", "relationship": "descendant" }, { "related_accession": "G59885HK", "relationship": "descendant" }, { "related_accession": "G60230HH", "relationship": "descendant" }, { "related_accession": "G60366LF", "relationship": "descendant" }, { "related_accession": "G60464IB", "relationship": "descendant" }, { "related_accession": "G61041MY", "relationship": "descendant" }, { "related_accession": "G61107IC", "relationship": "descendant" }, { "related_accession": "G61206XE", "relationship": "descendant" }, { "related_accession": "G61894MD", "relationship": "descendant" }, { "related_accession": "G62720KH", "relationship": "descendant" }, { "related_accession": "G63878BT", "relationship": "descendant" }, { "related_accession": "G65527PZ", "relationship": "descendant" }, { "related_accession": "G65564KC", "relationship": "descendant" }, { "related_accession": "G65898FK", "relationship": "descendant" }, { "related_accession": "G66118UZ", "relationship": "descendant" }, { "related_accession": "G66211LT", "relationship": "descendant" }, { "related_accession": "G66787RA", "relationship": "descendant" }, { "related_accession": "G66998XX", "relationship": "descendant" }, { "related_accession": "G67070ZZ", "relationship": "descendant" }, { "related_accession": "G67976UK", "relationship": "descendant" }, { "related_accession": "G69215YG", "relationship": "descendant" }, { "related_accession": "G69337UU", "relationship": "descendant" }, { "related_accession": "G69958YE", "relationship": "descendant" }, { "related_accession": "G70101JE", "relationship": "descendant" }, { "related_accession": "G70670FB", "relationship": "descendant" }, { "related_accession": "G70736PI", "relationship": "descendant" }, { "related_accession": "G71017QR", "relationship": "descendant" }, { "related_accession": "G71065BP", "relationship": "descendant" }, { "related_accession": "G71368HN", "relationship": "descendant" }, { "related_accession": "G72325UT", "relationship": "descendant" }, { "related_accession": "G72463LF", "relationship": "descendant" }, { "related_accession": "G73072RS", "relationship": "descendant" }, { "related_accession": "G73322RB", "relationship": "descendant" }, { "related_accession": "G74004KO", "relationship": "descendant" }, { "related_accession": "G74318TU", "relationship": "descendant" }, { "related_accession": "G74673OI", "relationship": "descendant" }, { "related_accession": "G74773VD", "relationship": "descendant" }, { "related_accession": "G74803EF", "relationship": "descendant" }, { "related_accession": "G74809AE", "relationship": "descendant" }, { "related_accession": "G74998HJ", "relationship": "descendant" }, { "related_accession": "G75906WU", "relationship": "descendant" }, { "related_accession": "G76645JW", "relationship": "descendant" }, { "related_accession": "G77025HC", "relationship": "descendant" }, { "related_accession": "G77807VX", "relationship": "descendant" }, { "related_accession": "G78376ZV", "relationship": "descendant" }, { "related_accession": "G78402VR", "relationship": "descendant" }, { "related_accession": "G78434HP", "relationship": "descendant" }, { "related_accession": "G79226KD", "relationship": "descendant" }, { "related_accession": "G81356NS", "relationship": "descendant" }, { "related_accession": "G81505ER", "relationship": "descendant" }, { "related_accession": "G81632VJ", "relationship": "descendant" }, { "related_accession": "G82080SE", "relationship": "descendant" }, { "related_accession": "G82959GZ", "relationship": "descendant" }, { "related_accession": "G83133RW", "relationship": "descendant" }, { "related_accession": "G84285FD", "relationship": "descendant" }, { "related_accession": "G84622HC", "relationship": "descendant" }, { "related_accession": "G84643WZ", "relationship": "descendant" }, { "related_accession": "G85422JN", "relationship": "descendant" }, { "related_accession": "G85824BG", "relationship": "descendant" }, { "related_accession": "G88707IJ", "relationship": "descendant" }, { "related_accession": "G88865JK", "relationship": "descendant" }, { "related_accession": "G89856DT", "relationship": "descendant" }, { "related_accession": "G91020XF", "relationship": "descendant" }, { "related_accession": "G91088AF", "relationship": "descendant" }, { "related_accession": "G91535MI", "relationship": "descendant" }, { "related_accession": "G91557DV", "relationship": "descendant" }, { "related_accession": "G91821KP", "relationship": "descendant" }, { "related_accession": "G92042VQ", "relationship": "descendant" }, { "related_accession": "G92287QG", "relationship": "descendant" }, { "related_accession": "G93088EE", "relationship": "descendant" }, { "related_accession": "G93299MA", "relationship": "descendant" }, { "related_accession": "G93575MM", "relationship": "descendant" }, { "related_accession": "G94600KT", "relationship": "descendant" }, { "related_accession": "G94720HF", "relationship": "descendant" }, { "related_accession": "G94748CQ", "relationship": "descendant" }, { "related_accession": "G95227SJ", "relationship": "descendant" }, { "related_accession": "G95713LQ", "relationship": "descendant" }, { "related_accession": "G95849ZD", "relationship": "descendant" }, { "related_accession": "G95896BB", "relationship": "descendant" }, { "related_accession": "G96024GG", "relationship": "descendant" }, { "related_accession": "G96540AM", "relationship": "descendant" }, { "related_accession": "G96797KG", "relationship": "descendant" }, { "related_accession": "G96920RV", "relationship": "descendant" }, { "related_accession": "G96983TA", "relationship": "descendant" }, { "related_accession": "G97455PT", "relationship": "descendant" }, { "related_accession": "G97496ZX", "relationship": "descendant" }, { "related_accession": "G97511SW", "relationship": "descendant" }, { "related_accession": "G97854LA", "relationship": "descendant" }, { "related_accession": "G97972ZM", "relationship": "descendant" }, { "related_accession": "G97996FN", "relationship": "descendant" }, { "related_accession": "G98719SR", "relationship": "descendant" }, { "related_accession": "G99689NZ", "relationship": "descendant" }, { "related_accession": "G00876GU", "relationship": "fullydetermined" }, { "related_accession": "G03019FG", "relationship": "fullydetermined" }, { "related_accession": "G07569NS", "relationship": "fullydetermined" }, { "related_accession": "G13847GJ", "relationship": "fullydetermined" }, { "related_accession": "G20463HA", "relationship": "fullydetermined" }, { "related_accession": "G26508HK", "relationship": "fullydetermined" }, { "related_accession": "G28615QI", "relationship": "fullydetermined" }, { "related_accession": "G30517YN", "relationship": "fullydetermined" }, { "related_accession": "G32780LD", "relationship": "fullydetermined" }, { "related_accession": "G34220QA", "relationship": "fullydetermined" }, { "related_accession": "G36581PT", "relationship": "fullydetermined" }, { "related_accession": "G39338NX", "relationship": "fullydetermined" }, { "related_accession": "G39578OU", "relationship": "fullydetermined" }, { "related_accession": "G39687WG", "relationship": "fullydetermined" }, { "related_accession": "G40352EF", "relationship": "fullydetermined" }, { "related_accession": "G41771ES", "relationship": "fullydetermined" }, { "related_accession": "G48350AZ", "relationship": "fullydetermined" }, { "related_accession": "G55086SI", "relationship": "fullydetermined" }, { "related_accession": "G57595UE", "relationship": "fullydetermined" }, { "related_accession": "G60230HH", "relationship": "fullydetermined" }, { "related_accession": "G60464IB", "relationship": "fullydetermined" }, { "related_accession": "G66787RA", "relationship": "fullydetermined" }, { "related_accession": "G67976UK", "relationship": "fullydetermined" }, { "related_accession": "G70670FB", "relationship": "fullydetermined" }, { "related_accession": "G72325UT", "relationship": "fullydetermined" }, { "related_accession": "G81356NS", "relationship": "fullydetermined" }, { "related_accession": "G81632VJ", "relationship": "fullydetermined" }, { "related_accession": "G88707IJ", "relationship": "fullydetermined" }, { "related_accession": "G91535MI", "relationship": "fullydetermined" }, { "related_accession": "G92287QG", "relationship": "fullydetermined" }, { "related_accession": "G93088EE", "relationship": "fullydetermined" }, { "related_accession": "G94600KT", "relationship": "fullydetermined" }, { "related_accession": "G94748CQ", "relationship": "fullydetermined" }, { "related_accession": "G95849ZD", "relationship": "fullydetermined" }, { "related_accession": "G96024GG", "relationship": "fullydetermined" }, { "related_accession": "G97455PT", "relationship": "fullydetermined" }, { "related_accession": "G97511SW", "relationship": "fullydetermined" }, { "related_accession": "G00876GU", "relationship": "leaf" }, { "related_accession": "G01096QY", "relationship": "leaf" }, { "related_accession": "G03019FG", "relationship": "leaf" }, { "related_accession": "G07569NS", "relationship": "leaf" }, { "related_accession": "G10987MU", "relationship": "leaf" }, { "related_accession": "G11176VR", "relationship": "leaf" }, { "related_accession": "G13847GJ", "relationship": "leaf" }, { "related_accession": "G15321UA", "relationship": "leaf" }, { "related_accession": "G18447KU", "relationship": "leaf" }, { "related_accession": "G20463HA", "relationship": "leaf" }, { "related_accession": "G24968XB", "relationship": "leaf" }, { "related_accession": "G26508HK", "relationship": "leaf" }, { "related_accession": "G28615QI", "relationship": "leaf" }, { "related_accession": "G30517YN", "relationship": "leaf" }, { "related_accession": "G32780LD", "relationship": "leaf" }, { "related_accession": "G34220QA", "relationship": "leaf" }, { "related_accession": "G35050EV", "relationship": "leaf" }, { "related_accession": "G36581PT", "relationship": "leaf" }, { "related_accession": "G39338NX", "relationship": "leaf" }, { "related_accession": "G39578OU", "relationship": "leaf" }, { "related_accession": "G39687WG", "relationship": "leaf" }, { "related_accession": "G40352EF", "relationship": "leaf" }, { "related_accession": "G41771ES", "relationship": "leaf" }, { "related_accession": "G48350AZ", "relationship": "leaf" }, { "related_accession": "G55086SI", "relationship": "leaf" }, { "related_accession": "G57595UE", "relationship": "leaf" }, { "related_accession": "G60230HH", "relationship": "leaf" }, { "related_accession": "G60464IB", "relationship": "leaf" }, { "related_accession": "G66787RA", "relationship": "leaf" }, { "related_accession": "G67976UK", "relationship": "leaf" }, { "related_accession": "G70670FB", "relationship": "leaf" }, { "related_accession": "G71065BP", "relationship": "leaf" }, { "related_accession": "G72325UT", "relationship": "leaf" }, { "related_accession": "G81356NS", "relationship": "leaf" }, { "related_accession": "G81632VJ", "relationship": "leaf" }, { "related_accession": "G88707IJ", "relationship": "leaf" }, { "related_accession": "G91535MI", "relationship": "leaf" }, { "related_accession": "G92287QG", "relationship": "leaf" }, { "related_accession": "G93088EE", "relationship": "leaf" }, { "related_accession": "G94600KT", "relationship": "leaf" }, { "related_accession": "G94748CQ", "relationship": "leaf" }, { "related_accession": "G95849ZD", "relationship": "leaf" }, { "related_accession": "G96024GG", "relationship": "leaf" }, { "related_accession": "G97455PT", "relationship": "leaf" }, { "related_accession": "G97511SW", "relationship": "leaf" }, { "related_accession": "G97996FN", "relationship": "leaf" }, { "related_accession": "G98719SR", "relationship": "leaf" }, { "related_accession": "G10410QZ", "relationship": "subsumes" }, { "related_accession": "G14351DY", "relationship": "subsumes" }, { "related_accession": "G22428GQ", "relationship": "subsumes" }, { "related_accession": "G22952TB", "relationship": "subsumes" }, { "related_accession": "G69215YG", "relationship": "subsumes" }, { "related_accession": "G69958YE", "relationship": "subsumes" }, { "related_accession": "G70101JE", "relationship": "subsumes" }, { "related_accession": "G74998HJ", "relationship": "subsumes" }, { "related_accession": "G96920RV", "relationship": "subsumes" } ], "names": [ { "name": "H9N2", "domain": "Composition (Short)" }, { "name": "HexNAc(2)Hex(9)", "domain": "Byonic" }, { "name": "HexNAc2Hex9", "domain": "UniCarbKB (Short)" }, { "name": "HexNAc2Hex9dHex0NeuAc0NeuGc0Pent0S0P0KDN0HexA0", "domain": "UniCarbKB" } ], "keywords": [], "glycotree_pathways": [], "dictionary": {}, "biomarkers": [], "section_stats": [ { "table_id": "glycoprotein", "table_stats": [ { "field": "total", "count": 4054 }, { "field": "total_sites", "count": 4054 } ], "sort_fields": [ "uniprot_canonical_ac", "start_pos", "end_pos", "residue", "protein_name", "gene_name", "tax_id", "tax_name", "tax_common_name" ] }, { "table_id": "expression", "table_stats": [ { "field": "total", "count": 132827 }, { "field": "total_sites", "count": 132827 } ], "sort_fields": [ "category", "tissue.name", "tissue.namespace", "tissue.id", "tissue.url", "abundance", "start_pos", "end_pos", "residue", "uniprot_canonical_ac" ] }, { "table_id": "expression_tissue", "table_stats": [ { "field": "total", "count": 132827 }, { "field": "total_sites", "count": 132827 } ], "sort_fields": [ "category", "tissue.name", "tissue.namespace", "tissue.id", "tissue.url", "abundance", "start_pos", "end_pos", "residue", "uniprot_canonical_ac" ] }, { "table_id": "expression_cell_line", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [ "category", "abundance", "start_pos", "end_pos", "residue", "uniprot_canonical_ac" ] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 27 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }