{ "glytoucan_ac": "G04433GV", "number_monosaccharides": 9, "number_monosaccharides_suffix": "", "mass": 2162.73, "mass_pme": 2709.34, "tool_support": { "gnome_glygen_oglycans": "no", "sandbox": "yes", "gnome_glygen": "yes", "gnome": "yes", "gnome_glycotree_oglycans": "no", "pdb": "yes", "gnome_glygen_nglycans": "no", "gnome_glycotree_nglycans": "no" }, "fully_determined": "yes", "missing_score": 0, "glycan_type": "Saccharide", "iupac": "\u03b1-D-Neup5Ac-(2\u21928)-\u03b1-D-Neup5Ac-(2\u21928)-\u03b1-D-Neup5Ac-(2\u21923)[\u03b1-D-Neup5Ac-(2\u21923)-\u03b2-D-Galp-(1\u21923)[\u03b1-D-Neup5Ac-(2\u21926)]-\u03b2-D-GalpNAc-(1\u21924)]-\u03b2-D-Galp-(1\u21924)-\u03b2-D-Glcp-(1\u2192", "wurcs": "WURCS=2.0/4,9,8/[a2122h-1b_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a2112h-1b_1-5_2*NCC/3=O]/1-2-3-3-3-4-2-3-3/a4-b1_b3-c2_b4-f1_c8-d2_d8-e2_f3-g1_f6-i2_g3-h2", "glycoct": "RES 1b:b-dglc-HEX-1:5 2b:b-dgal-HEX-1:5 3b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 4s:n-acetyl 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"species": [], "classification": [ { "type": { "name": "Glycosphingolipid" }, "subtype": { "name": "Ganglio series" } } ], "enzyme": [ { "uniprot_canonical_ac": "G5E897-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G04433GV", "protein_name": "Protein O-glucosyltransferase 3", "gene": "Poglut3", "gene_link": "https://www.uniprot.org/uniprot/G5E897", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G04433GV", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G04433GV" } ] }, { "uniprot_canonical_ac": "Q6UW63-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G04433GV", "protein_name": "Protein O-glucosyltransferase 2", "gene": "POGLUT2", "gene_link": "https://www.uniprot.org/uniprot/Q6UW63", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G04433GV", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G04433GV" } ] }, { "uniprot_canonical_ac": "Q7Z4H8-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G04433GV", "protein_name": "Protein O-glucosyltransferase 3", "gene": "POGLUT3", "gene_link": "https://www.uniprot.org/uniprot/Q7Z4H8", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G04433GV", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G04433GV" } ] }, { "uniprot_canonical_ac": "Q8BYB9-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G04433GV", "protein_name": "Protein O-glucosyltransferase 1", "gene": "Poglut1", "gene_link": "https://www.uniprot.org/uniprot/Q8BYB9", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G04433GV", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G04433GV" } ] }, { "uniprot_canonical_ac": "Q8NBL1-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G04433GV", "protein_name": "Protein O-glucosyltransferase 1", "gene": "POGLUT1", "gene_link": "https://www.uniprot.org/uniprot/Q8NBL1", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G04433GV", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G04433GV" } ] }, { "uniprot_canonical_ac": "Q9JHP7-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G04433GV", "protein_name": "Protein O-glucosyltransferase 2", "gene": "Poglut2", "gene_link": "https://www.uniprot.org/uniprot/Q9JHP7", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G04433GV", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G04433GV" } ] } ], "crossref": [ { "id": "146016689", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/146016689", "database": "PubChem Compound", "categories": [ "Chemical" ] }, { "id": "405039359", "url": "https://pubchem.ncbi.nlm.nih.gov/substance/405039359", "database": "PubChem Substance", "categories": [ "Chemical" ] }, { "id": "157202", "url": "https://www.ebi.ac.uk/chebi/searchId.do?chebiId=157202", "database": "ChEBI", "categories": [] }, { "id": "G04433GV", "url": "https://glytoucan.org/Structures/Glycans/G04433GV", "database": "GlyTouCan", "categories": [ "Glycomics" ] }, { "id": "G04433GV", "url": "https://sandbox.glyomics.org/explore.html?G04433GV", "database": "SandBox", "categories": [ "Enzyme and Pathway" ] }, { "id": "G04433GV", "url": "https://gnome.glyomics.org/restrictions/GlyGen.StructureBrowser.html?focus=G04433GV", "database": "GNOme", "categories": [ "Ontology and Dictionary", "Glycomics" ] }, { "id": "G04433GV", "url": "https://glycosmos.org/glycans/show/G04433GV", "database": "GlyCosmos", "categories": [ "Glycoproteomics", "Glycomics" ] } ], "glycoprotein": [], "publication": [ { "title": "Novel polysialogangliosides of skate brain structural determination of tetra, penta and hexasialogangliosides with a NeuAc-GalNAc linkage.", "journal": "European journal of biochemistry", "date": "2000", "authors": "Nakamura K, Kojima H, Suzuki M, Suzuki A, Tamai Y", "evidence": [ { "database": "Glycan Motif", "id": "GGM.000119", "url": "https://glycomotif.glyomics.org/glycomotif/GGM.000119" } ], "reference": [ { "type": "PubMed", "id": "10931205", "url": "https://glygen.org/publication/PubMed/10931205" } ] }, { "title": "The repertoire of glycan determinants in the human glycome.", "journal": "Molecular bioSystems", "date": "2009", "authors": "Cummings RD", "evidence": [ { "database": "Glycan Motif", "id": "GGM.000119", "url": "https://glycomotif.glyomics.org/glycomotif/GGM.000119" } ], "reference": [ { "type": "PubMed", "id": "19756298", "url": "https://glygen.org/publication/PubMed/19756298" } ] } ], "residues": [ { "id": "OC3", "name": "O-glycan_core_x-D-Glcx_C3", "attachedby": "rxn.G5E897-1", "detachedby": "", "parentid": "0" }, { "id": "OC3", "name": "O-glycan_core_x-D-Glcx_C3", "attachedby": "rxn.Q6UW63-1", "detachedby": "", "parentid": "0" }, { "id": "OC3", "name": 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