{ "glytoucan_ac": "G02752WS", "number_monosaccharides": 4, "number_monosaccharides_suffix": "", "mass": 997.32, "mass_pme": 1277.64, "tool_support": { "gnome_glygen_oglycans": "yes", "sandbox": "yes", "gnome_glygen": "yes", "gnome": "yes", "gnome_glycotree_oglycans": "yes", "pdb": "no", "gnome_glygen_nglycans": "no", "gnome_glycotree_nglycans": "no" }, "fully_determined": "", "missing_score": 738, "glycan_type": "Saccharide", "iupac": "?-D-Neup5Gc-(2\u21923)-?-D-Galp-(1\u21923)[?-D-Neup5Gc-(2\u21926)]-\u03b1-D-GalpNAc-(1\u2192", "wurcs": "WURCS=2.0/3,4,3/[a2112h-1a_1-5_2*NCC/3=O][a2112h-1x_1-5][Aad21122h-2x_2-6_5*NCCO/3=O]/1-2-3-3/a3-b1_a6-d2_b3-c2", "glycoct": "RES 1b:a-dgal-HEX-1:5 2s:n-acetyl 3b:x-dgal-HEX-1:5 4b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d 5s:n-glycolyl 6b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d 7s:n-glycolyl LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:3o(3+2)4d 4:4d(5+1)5n 5:1o(6+2)6d 6:6d(5+1)7n", "inchi": "InChI=1S/C36H59N3O29/c1-10(45)37-21-27(25(55)16(63-31(21)57)9-62-35(33(58)59)2-11(46)19(38-17(50)7-43)28(66-35)22(52)13(48)4-40)65-32-26(56)30(24(54)15(6-42)64-32)68-36(34(60)61)3-12(47)20(39-18(51)8-44)29(67-36)23(53)14(49)5-41/h11-16,19-32,40-44,46-49,52-57H,2-9H2,1H3,(H,37,45)(H,38,50)(H,39,51)(H,58,59)(H,60,61)/t11-,12-,13+,14+,15+,16+,19+,20+,21+,22+,23+,24-,25-,26+,27+,28+,29+,30-,31-,32?,35?,36?/m0/s1", "glycam": "", "smiles_isomeric": "CC(=O)N[C@@H]1[C@H]([C@H]([C@H](O[C@@H]1O)COC2(C[C@@H]([C@H]([C@@H](O2)[C@@H]([C@@H](CO)O)O)NC(=O)CO)O)C(=O)O)O)OC3[C@@H]([C@H]([C@H]([C@H](O3)CO)O)OC4(C[C@@H]([C@H]([C@@H](O4)[C@@H]([C@@H](CO)O)O)NC(=O)CO)O)C(=O)O)O", "inchi_key": { "key": "PZFXQTGXQQHXKX-BDLMRYPKSA-N", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/PZFXQTGXQQHXKX-BDLMRYPKSA-N" }, "byonic": "HexNAc(1)Hex(1)NeuGc(2) % 997.323423335", "gwb": "freeEnd--1a1D-GalNAc,p(--3?1D-Gal,p--3?2D-NeuGc,p)--6?2D-NeuGc,p$MONO,Und,0,0,freeEnd", "species": [ { "taxid": 9913, "name": "Bos taurus", "annotation_category": "subsumption", "evidence": [ { "database": "Subsumption", "id": "G85079IJ", "url": "https://www.glygen.org/glycan/G85079IJ" } ], "common_name": "Bovine", "glygen_name": "Bovine", "reference_species": "Bos taurus [9913]" }, { "taxid": 9606, "name": "Homo sapiens", "annotation_category": "subsumption", "evidence": [ { "database": "Subsumption", "id": "G85079IJ", "url": "https://www.glygen.org/glycan/G85079IJ" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" }, { "taxid": 9823, "name": "Sus scrofa", "annotation_category": "subsumption", "evidence": [ { "database": "Subsumption", "id": "G85079IJ", "url": "https://www.glygen.org/glycan/G85079IJ" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" }, { "taxid": 7955, "name": "Danio rerio", "annotation_category": "subsumption", "evidence": [ { "database": "Subsumption", "id": "G85079IJ", "url": "https://www.glygen.org/glycan/G85079IJ" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" }, { "taxid": 10090, "name": "Mus musculus", "annotation_category": "direct", "evidence": [ { "database": "GlyConnect", "id": "3018", "url": "https://glyconnect.expasy.org/browser/structures/3018" }, { "database": "GlyCosmos", "id": "G02752WS", "url": "https://glycosmos.org/glycans/show/G02752WS" }, { "database": "PubMed", "id": "10713085", "url": "https://glygen.org/publication/PubMed/10713085" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "classification": [ { "type": { "name": "O-linked", "url": "" }, "subtype": { "name": "Core 1", "url": "" } }, { "type": { "name": "O-linked", "url": "" }, "subtype": { "name": "Core 8" } } ], "enzyme": [ { "uniprot_canonical_ac": "E5D8G1-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase", "gene": "Galntl6", "gene_link": "https://www.uniprot.org/uniprot/E5D8G1", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "G3X942-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase", "gene": "Galnt9", "gene_link": "https://www.uniprot.org/uniprot/G3X942", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "O08832-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 4", "gene": "Galnt4", "gene_link": "https://www.uniprot.org/uniprot/O08832", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "O08912-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 1", "gene": "Galnt1", "gene_link": "https://www.uniprot.org/uniprot/O08912", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "P70419-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 3", "gene": "Galnt3", "gene_link": "https://www.uniprot.org/uniprot/P70419", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "Q10471-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 2", "gene": "GALNT2", "gene_link": "https://www.uniprot.org/uniprot/Q10471", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "Q10472-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 1", "gene": "GALNT1", "gene_link": "https://www.uniprot.org/uniprot/Q10472", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "Q14435-1", "xref_key": "glycan_xref_sandbox", 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"https://www.uniprot.org/uniprot/Q6IS24", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "Q6P9A2-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 18", "gene": "GALNT18", "gene_link": "https://www.uniprot.org/uniprot/Q6P9A2", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "Q6P9S7-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 10", "gene": "Galnt10", "gene_link": "https://www.uniprot.org/uniprot/Q6P9S7", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "Q6PB93-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 2", "gene": "Galnt2", "gene_link": "https://www.uniprot.org/uniprot/Q6PB93", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "Q7TT15-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 17", "gene": "Galnt17", "gene_link": "https://www.uniprot.org/uniprot/Q7TT15", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { 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"N-acetylgalactosaminyltransferase 7", "gene": "Galnt7", "gene_link": "https://www.uniprot.org/uniprot/Q80VA0", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "Q86SF2-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "N-acetylgalactosaminyltransferase 7", "gene": "GALNT7", "gene_link": "https://www.uniprot.org/uniprot/Q86SF2", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "Q86SR1-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 10", "gene": "GALNT10", "gene_link": "https://www.uniprot.org/uniprot/Q86SR1", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "Q8BGT9-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 12", "gene": "Galnt12", "gene_link": "https://www.uniprot.org/uniprot/Q8BGT9", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "Q8BVG5-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 14", "gene": "Galnt14", "gene_link": "https://www.uniprot.org/uniprot/Q8BVG5", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "Q8C102-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 5", "gene": "Galnt5", "gene_link": "https://www.uniprot.org/uniprot/Q8C102", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "Q8C7U7-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 6", "gene": "Galnt6", "gene_link": "https://www.uniprot.org/uniprot/Q8C7U7", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "Q8CF93-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 13", "gene": "Galnt13", "gene_link": "https://www.uniprot.org/uniprot/Q8CF93", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "Q8IUC8-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 13", "gene": "GALNT13", "gene_link": "https://www.uniprot.org/uniprot/Q8IUC8", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "Q8IXK2-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 12", "gene": "GALNT12", "gene_link": "https://www.uniprot.org/uniprot/Q8IXK2", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "Q8K1B9-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 18", "gene": "Galnt18", "gene_link": "https://www.uniprot.org/uniprot/Q8K1B9", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "Q8N3T1-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 15", "gene": "GALNT15", "gene_link": "https://www.uniprot.org/uniprot/Q8N3T1", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "Q8N428-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 16", "gene": "GALNT16", "gene_link": "https://www.uniprot.org/uniprot/Q8N428", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": "Q8N4A0-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02752WS", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 4", "gene": "GALNT4", "gene_link": "https://www.uniprot.org/uniprot/Q8N4A0", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02752WS", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02752WS" } ] }, { "uniprot_canonical_ac": 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