{ "glytoucan_ac": "G00979XR", "number_monosaccharides": 8, "number_monosaccharides_suffix": "", "mass": 1478.54, "mass_pme": 1842.95, "tool_support": { "gnome_glygen_oglycans": "yes", "sandbox": "yes", "gnome_glygen": "yes", "gnome": "yes", "gnome_glycotree_oglycans": "yes", "pdb": "yes", "gnome_glygen_nglycans": "no", "gnome_glycotree_nglycans": "no" }, "fully_determined": "yes", "missing_score": 0, "glycan_type": "Saccharide", "iupac": "\u03b2-D-Galp-(1\u21924)-\u03b2-D-GlcpNAc-(1\u21923)[\u03b2-D-Galp-(1\u21924)-\u03b2-D-GlcpNAc-(1\u21926)]-\u03b2-D-Galp-(1\u21923)[\u03b2-D-Galp-(1\u21924)-\u03b2-D-GlcpNAc-(1\u21926)]-\u03b1-D-GalpNAc-(1\u2192", "wurcs": "WURCS=2.0/3,8,7/[a2112h-1a_1-5_2*NCC/3=O][a2112h-1b_1-5][a2122h-1b_1-5_2*NCC/3=O]/1-2-3-2-3-2-3-2/a3-b1_a6-g1_b3-c1_b6-e1_c4-d1_e4-f1_g4-h1", "glycoct": "RES 1b:a-dgal-HEX-1:5 2s:n-acetyl 3b:b-dgal-HEX-1:5 4b:b-dglc-HEX-1:5 5s:n-acetyl 6b:b-dgal-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:b-dglc-HEX-1:5 11s:n-acetyl 12b:b-dgal-HEX-1:5 LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:3o(3+1)4d 4:4d(2+1)5n 5:4o(4+1)6d 6:3o(6+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:1o(6+1)10d 10:10d(2+1)11n 11:10o(4+1)12d", "inchi": "InChI=1S/C56H94N4O41/c1-13(67)57-25-34(76)44(97-53-40(82)37(79)29(71)17(5-61)90-53)20(8-64)93-50(25)87-11-23-32(74)47(28(49(86)89-23)60-16(4)70)100-56-43(85)48(101-52-27(59-15(3)69)36(78)46(22(10-66)95-52)99-55-42(84)39(81)31(73)19(7-63)92-55)33(75)24(96-56)12-88-51-26(58-14(2)68)35(77)45(21(9-65)94-51)98-54-41(83)38(80)30(72)18(6-62)91-54/h17-56,61-66,71-86H,5-12H2,1-4H3,(H,57,67)(H,58,68)(H,59,69)(H,60,70)/t17-,18-,19-,20-,21-,22-,23-,24-,25-,26-,27-,28-,29+,30+,31+,32+,33+,34-,35-,36-,37+,38+,39+,40-,41-,42-,43-,44-,45-,46-,47-,48+,49+,50-,51-,52+,53+,54+,55+,56+/m1/s1", "glycam": "DGalpb1-4DGlcpNAcb1-3[DGalpb1-4DGlcpNAcb1-6]DGalpb1-3[DGalpb1-4DGlcpNAcb1-6]DGalpNAca1-OH", "smiles_isomeric": "CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1OC[C@@H]2[C@@H]([C@@H]([C@H]([C@H](O2)O)NC(=O)C)O[C@H]3[C@@H]([C@H]([C@H]([C@H](O3)CO[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O[C@H]5[C@@H]([C@H]([C@H]([C@H](O5)CO)O)O)O)O)NC(=O)C)O)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O[C@H]7[C@@H]([C@H]([C@H]([C@H](O7)CO)O)O)O)O)NC(=O)C)O)O)CO)O[C@H]8[C@@H]([C@H]([C@H]([C@H](O8)CO)O)O)O)O", "inchi_key": { "key": "JGISJBJJCNFBND-XNJAXMNGSA-N", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/JGISJBJJCNFBND-XNJAXMNGSA-N" }, "byonic": "HexNAc(4)Hex(4) % 1478.53934912", "gwb": "freeEnd--1a1D-GalNAc,p(--3b1D-Gal,p(--3b1D-GlcNAc,p--4b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,0,0,freeEnd", "species": [ { "taxid": 9606, "name": "Homo sapiens", "annotation_category": "direct", "evidence": [ { "database": "GlyConnect", "id": "179", "url": "https://glyconnect.expasy.org/browser/structures/179" }, { "database": "GlyCosmos", "id": "G00979XR", "url": "https://glycosmos.org/glycans/show/G00979XR" }, { "database": "PubMed", "id": "2040278", "url": "https://glygen.org/publication/PubMed/2040278" }, { "database": "PubMed", "id": "2737211", "url": "https://glygen.org/publication/PubMed/2737211" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "classification": [ { "type": { "name": "O-linked", "url": "" }, "subtype": { "name": "Core 2", "url": "" } } ], "enzyme": [ { "uniprot_canonical_ac": "E5D8G1-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase", "gene": "Galntl6", "gene_link": "https://www.uniprot.org/uniprot/E5D8G1", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "G3X942-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase", "gene": "Galnt9", "gene_link": "https://www.uniprot.org/uniprot/G3X942", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "O08832-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 4", "gene": "Galnt4", "gene_link": "https://www.uniprot.org/uniprot/O08832", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "O08912-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 1", "gene": "Galnt1", "gene_link": "https://www.uniprot.org/uniprot/O08912", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "P70419-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 3", "gene": "Galnt3", "gene_link": "https://www.uniprot.org/uniprot/P70419", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q10471-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 2", "gene": "GALNT2", "gene_link": "https://www.uniprot.org/uniprot/Q10471", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q10472-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 1", "gene": "GALNT1", "gene_link": "https://www.uniprot.org/uniprot/Q10472", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q14435-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 3", "gene": "GALNT3", "gene_link": "https://www.uniprot.org/uniprot/Q14435", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q49A17-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase-like 6", "gene": "GALNTL6", "gene_link": "https://www.uniprot.org/uniprot/Q49A17", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q6IS24-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 17", "gene": "GALNT17", "gene_link": "https://www.uniprot.org/uniprot/Q6IS24", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q6P9A2-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 18", "gene": "GALNT18", "gene_link": "https://www.uniprot.org/uniprot/Q6P9A2", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q6P9S7-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 10", "gene": "Galnt10", "gene_link": "https://www.uniprot.org/uniprot/Q6P9S7", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q6PB93-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 2", "gene": "Galnt2", "gene_link": "https://www.uniprot.org/uniprot/Q6PB93", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q7TT15-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 17", "gene": "Galnt17", "gene_link": "https://www.uniprot.org/uniprot/Q7TT15", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q7Z4T8-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5", "gene": "GALNTL5", "gene_link": "https://www.uniprot.org/uniprot/Q7Z4T8", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q7Z7M9-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 5", "gene": "GALNT5", "gene_link": "https://www.uniprot.org/uniprot/Q7Z7M9", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q80VA0-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "N-acetylgalactosaminyltransferase 7", "gene": "Galnt7", "gene_link": "https://www.uniprot.org/uniprot/Q80VA0", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q86SF2-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "N-acetylgalactosaminyltransferase 7", "gene": "GALNT7", "gene_link": "https://www.uniprot.org/uniprot/Q86SF2", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q86SR1-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 10", "gene": "GALNT10", "gene_link": "https://www.uniprot.org/uniprot/Q86SR1", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q8BGT9-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 12", "gene": "Galnt12", "gene_link": "https://www.uniprot.org/uniprot/Q8BGT9", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q8BVG5-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 14", "gene": "Galnt14", "gene_link": "https://www.uniprot.org/uniprot/Q8BVG5", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q8C102-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 5", "gene": "Galnt5", "gene_link": "https://www.uniprot.org/uniprot/Q8C102", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q8C7U7-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 6", "gene": "Galnt6", "gene_link": "https://www.uniprot.org/uniprot/Q8C7U7", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q8CF93-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 13", "gene": "Galnt13", "gene_link": "https://www.uniprot.org/uniprot/Q8CF93", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q8IUC8-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 13", "gene": "GALNT13", "gene_link": "https://www.uniprot.org/uniprot/Q8IUC8", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q8IXK2-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 12", "gene": "GALNT12", "gene_link": "https://www.uniprot.org/uniprot/Q8IXK2", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q8K1B9-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 18", "gene": "Galnt18", "gene_link": "https://www.uniprot.org/uniprot/Q8K1B9", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q8N3T1-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 15", "gene": "GALNT15", "gene_link": "https://www.uniprot.org/uniprot/Q8N3T1", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q8N428-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 16", "gene": "GALNT16", "gene_link": "https://www.uniprot.org/uniprot/Q8N428", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q8N4A0-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 4", "gene": "GALNT4", "gene_link": "https://www.uniprot.org/uniprot/Q8N4A0", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q8NCL4-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 6", "gene": "GALNT6", "gene_link": "https://www.uniprot.org/uniprot/Q8NCL4", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q8NCW6-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 11", "gene": "GALNT11", "gene_link": "https://www.uniprot.org/uniprot/Q8NCW6", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q921L8-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 11", "gene": "Galnt11", "gene_link": "https://www.uniprot.org/uniprot/Q921L8", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q96FL9-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 14", "gene": "GALNT14", "gene_link": "https://www.uniprot.org/uniprot/Q96FL9", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q9D2N8-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 15", "gene": "Galnt15", "gene_link": "https://www.uniprot.org/uniprot/Q9D2N8", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q9D4M9-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5", "gene": "Galntl5", "gene_link": "https://www.uniprot.org/uniprot/Q9D4M9", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q9HCQ5-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 9", "gene": "GALNT9", "gene_link": "https://www.uniprot.org/uniprot/Q9HCQ5", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q9JJ61-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 16", "gene": "Galnt16", "gene_link": "https://www.uniprot.org/uniprot/Q9JJ61", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q96EU7-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "C1GALT1-specific chaperone 1", "gene": "C1GALT1C1", "gene_link": "https://www.uniprot.org/uniprot/Q96EU7", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q9JJ06-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1", "gene": "C1galt1", "gene_link": "https://www.uniprot.org/uniprot/Q9JJ06", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q9JMG2-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "C1GALT1-specific chaperone 1", "gene": "C1galt1c1", "gene_link": "https://www.uniprot.org/uniprot/Q9JMG2", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q9NS00-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1", "gene": "C1GALT1", "gene_link": "https://www.uniprot.org/uniprot/Q9NS00", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q5JCS9-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3", "gene": "B3gnt3", "gene_link": "https://www.uniprot.org/uniprot/Q5JCS9", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q9Y2A9-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3", "gene": "B3GNT3", "gene_link": "https://www.uniprot.org/uniprot/Q9Y2A9", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "O95395-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3", "gene": "GCNT3", "gene_link": "https://www.uniprot.org/uniprot/O95395", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "P97402-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase", "gene": "Gcnt2", "gene_link": "https://www.uniprot.org/uniprot/P97402", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q02742-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase", "gene": "GCNT1", "gene_link": "https://www.uniprot.org/uniprot/Q02742", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q09324-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase", "gene": "Gcnt1", "gene_link": "https://www.uniprot.org/uniprot/Q09324", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q5JCT0-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3", "gene": "Gcnt3", "gene_link": "https://www.uniprot.org/uniprot/Q5JCT0", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q8N0V5-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase", "gene": "GCNT2", "gene_link": "https://www.uniprot.org/uniprot/Q8N0V5", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "O43286-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Beta-1,4-galactosyltransferase 5", "gene": "B4GALT5", "gene_link": "https://www.uniprot.org/uniprot/O43286", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "O60512-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene": "B4GALT3", "gene_link": "https://www.uniprot.org/uniprot/O60512", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "O60513-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Beta-1,4-galactosyltransferase 4", "gene": "B4GALT4", "gene_link": "https://www.uniprot.org/uniprot/O60513", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "O60909-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene": "B4GALT2", "gene_link": "https://www.uniprot.org/uniprot/O60909", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "P15291-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene": "B4GALT1", "gene_link": "https://www.uniprot.org/uniprot/P15291", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "P15535-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene": "B4galt1", "gene_link": "https://www.uniprot.org/uniprot/P15535", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q91YY2-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene": "B4galt3", "gene_link": "https://www.uniprot.org/uniprot/Q91YY2", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q9JJ04-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Beta-1,4-galactosyltransferase 4", "gene": "B4galt4", "gene_link": "https://www.uniprot.org/uniprot/Q9JJ04", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q9JMK0-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Beta-1,4-galactosyltransferase 5", "gene": "B4galt5", "gene_link": "https://www.uniprot.org/uniprot/Q9JMK0", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] }, { "uniprot_canonical_ac": "Q9Z2Y2-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G00979XR", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene": "B4galt2", "gene_link": "https://www.uniprot.org/uniprot/Q9Z2Y2", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G00979XR", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G00979XR" } ] } ], "crossref": [ { "id": "91859439", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/91859439", "database": "PubChem Compound", "categories": [ "Chemical" ] }, { "id": "252293033", "url": "https://pubchem.ncbi.nlm.nih.gov/substance/252293033", "database": "PubChem Substance", "categories": [ "Chemical" ] }, { "id": "G00212", "url": "https://www.genome.jp/dbget-bin/www_bget?gl:G00212", "database": "KEGG Glycan", "categories": [ "Enzyme and Pathway" ] }, { "id": "620", "url": "", "database": "Glycosciences.de", "categories": [ "Glycomics" ] }, { "id": "179", "url": "https://glyconnect.expasy.org/browser/structures/179", "database": "GlyConnect", "categories": [ "Glycoproteomics", "Glycomics" ] }, { "id": "43958", "url": "https://www.genome.jp/dbget-bin/www_bget?carbbank+43958", "database": "CarbBank", "categories": [ "Glycomics" ] }, { "id": "146433", "url": "https://www.ebi.ac.uk/chebi/searchId.do?chebiId=146433", "database": "ChEBI", "categories": [] }, { "id": "G00979XR", "url": "https://glytoucan.org/Structures/Glycans/G00979XR", "database": "GlyTouCan", "categories": [ "Glycomics" ] }, { "id": "G00979XR", "url": "https://sandbox.glyomics.org/explore.html?G00979XR", "database": "SandBox", "categories": [ "Enzyme and Pathway" ] }, { "id": "G00979XR", "url": "https://gnome.glyomics.org/restrictions/GlyGen.StructureBrowser.html?focus=G00979XR", "database": "GNOme", "categories": [ "Ontology and Dictionary", "Glycomics" ] }, { "id": "G00979XR", "url": "https://glycosmos.org/glycans/show/G00979XR", "database": "GlyCosmos", "categories": [ "Glycoproteomics", "Glycomics" ] } ], "glycoprotein": [ { "uniprot_canonical_ac": "P01876-2", "evidence": [ { "database": "PubMed", "id": "2737211", "url": "https://glygen.org/publication/PubMed/2737211" }, { "database": "GlyConnect", "id": "230", "url": "https://glyconnect.expasy.org/browser/proteins/230" } ], "protein_name": "Immunoglobulin heavy constant alpha 1", "gene_name": "IGHA1", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human" } ], "publication": [ { "title": "Isolation and structural characterization of novel neutral oligosaccharide-alditols from respiratory-mucus glycoproteins of a patient suffering from bronchiectasis. 2. Structure of twelve hepta-to-nonasaccharides, six of which possess the GlcNAc beta(1----3)[Gal beta(1----4)GlcNAc beta(1----6)]Gal beta(1----3)GalNAc-ol common structural element.", "journal": "European journal of biochemistry", "date": "1991", "authors": "van Kuik JA, de Waard P, Vliegenthart JF, Klein A, Carnoy C, Lamblin G, Roussel P", "evidence": [ { "database": "GlyTouCan", "id": "G00979XR", "url": "https://glytoucan.org/Structures/Glycans/G00979XR" }, { "database": "GlyConnect", "id": "401", "url": "https://glyconnect.expasy.org/browser/proteins/401" } ], "reference": [ { "type": "PubMed", "id": "2040278", "url": "https://glygen.org/publication/PubMed/2040278" } ] }, { "title": "Primary structure of twenty three neutral and monosialylated oligosaccharides O-glycosidically linked to the human secretory immunoglobulin A hinge region determined by a combination of permethylation analysis and 400-MHz 1H-NMR spectroscopy.", "journal": "European journal of biochemistry", "date": "1989", "authors": "Pierce-Cretel A, Decottignies JP, Wieruszeski JM, Strecker G, Montreuil J, Spik G", "evidence": [ { "database": "GlyTouCan", "id": "G00979XR", "url": "https://glytoucan.org/Structures/Glycans/G00979XR" }, { "database": "GlyConnect", "id": "230", "url": "https://glyconnect.expasy.org/browser/proteins/230" } ], "reference": [ { "type": "PubMed", "id": "2737211", "url": "https://glygen.org/publication/PubMed/2737211" } ] } ], "residues": [ { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.E5D8G1-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.G3X942-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.O08832-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.O08912-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.P70419-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q10471-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q10472-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q14435-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q49A17-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q6IS24-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q6P9A2-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q6P9S7-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q6PB93-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q7TT15-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q7Z4T8-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q7Z7M9-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q80VA0-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q86SF2-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q86SR1-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q8BGT9-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q8BVG5-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q8C102-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q8C7U7-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q8CF93-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q8IUC8-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q8IXK2-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q8K1B9-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q8N3T1-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q8N428-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q8N4A0-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q8NCL4-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q8NCW6-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q921L8-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q96FL9-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q9D2N8-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q9D4M9-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q9HCQ5-1", "detachedby": "", "parentid": "0" }, { "id": "OC", "name": "O-glycan_core_x-D-GalpNAc_C", "attachedby": "rxn.Q9JJ61-1", "detachedby": "", "parentid": "0" }, { "id": "O152", "name": "O-glycan_b-D-Galp_152", "attachedby": "rxn.Q96EU7-1", "detachedby": "", "parentid": "OC" }, { "id": "O152", "name": "O-glycan_b-D-Galp_152", "attachedby": "rxn.Q9JJ06-1", "detachedby": "", "parentid": "OC" }, { "id": "O152", "name": "O-glycan_b-D-Galp_152", "attachedby": "rxn.Q9JMG2-1", "detachedby": "", "parentid": "OC" }, { "id": "O152", "name": "O-glycan_b-D-Galp_152", "attachedby": "rxn.Q9NS00-1", "detachedby": "", "parentid": "OC" }, { "id": "O153", "name": "O-glycan_b-D-GlcpNAc_153", "attachedby": "rxn.Q5JCS9-1", "detachedby": "", "parentid": "O152" }, { "id": "O153", "name": "O-glycan_b-D-GlcpNAc_153", "attachedby": "rxn.Q9Y2A9-1", "detachedby": "", "parentid": "O152" }, { "id": "O157", "name": "O-glycan_b-D-GlcpNAc_157", "attachedby": "rxn.O95395-1", "detachedby": "", "parentid": "OC" }, { "id": "O157", "name": "O-glycan_b-D-GlcpNAc_157", "attachedby": "rxn.P97402-1", "detachedby": "", "parentid": "OC" }, { "id": "O157", "name": "O-glycan_b-D-GlcpNAc_157", "attachedby": "rxn.Q02742-1", "detachedby": "", "parentid": "OC" }, { "id": "O157", "name": "O-glycan_b-D-GlcpNAc_157", "attachedby": "rxn.Q09324-1", "detachedby": "", "parentid": "OC" }, { "id": "O157", "name": "O-glycan_b-D-GlcpNAc_157", "attachedby": "rxn.Q5JCT0-1", "detachedby": "", "parentid": "OC" }, { "id": "O157", "name": "O-glycan_b-D-GlcpNAc_157", "attachedby": "rxn.Q8N0V5-1", "detachedby": "", "parentid": "OC" }, { "id": "O158", "name": "O-glycan_b-D-Galp_158", "attachedby": "rxn.O43286-1", "detachedby": "", "parentid": "O157" }, { "id": "O158", "name": "O-glycan_b-D-Galp_158", "attachedby": "rxn.O60512-1", "detachedby": "", "parentid": "O157" }, { "id": "O158", "name": "O-glycan_b-D-Galp_158", "attachedby": "rxn.O60513-1", "detachedby": "", "parentid": "O157" }, { "id": "O158", "name": "O-glycan_b-D-Galp_158", "attachedby": "rxn.O60909-1", "detachedby": "", "parentid": "O157" }, { "id": "O158", "name": "O-glycan_b-D-Galp_158", "attachedby": "rxn.P15291-1", "detachedby": "", "parentid": "O157" }, { "id": "O158", "name": "O-glycan_b-D-Galp_158", "attachedby": "rxn.P15535-1", "detachedby": "", "parentid": "O157" }, { "id": "O158", "name": "O-glycan_b-D-Galp_158", "attachedby": "rxn.Q91YY2-1", "detachedby": "", "parentid": "O157" }, { "id": "O158", "name": "O-glycan_b-D-Galp_158", "attachedby": "rxn.Q9JJ04-1", "detachedby": "", "parentid": "O157" }, { "id": "O158", "name": "O-glycan_b-D-Galp_158", "attachedby": "rxn.Q9JMK0-1", "detachedby": "", "parentid": "O157" }, { "id": "O158", "name": "O-glycan_b-D-Galp_158", "attachedby": "rxn.Q9Z2Y2-1", "detachedby": "", "parentid": "O157" }, { "id": "O538", "name": "O-glycan_b-D-GlcpNAc_538", "attachedby": "rxn.O95395-1", "detachedby": "", "parentid": "O152" }, { "id": "O538", "name": "O-glycan_b-D-GlcpNAc_538", "attachedby": "rxn.P97402-1", "detachedby": "", "parentid": "O152" }, { "id": "O538", "name": "O-glycan_b-D-GlcpNAc_538", "attachedby": "rxn.Q02742-1", "detachedby": "", "parentid": "O152" }, { "id": "O538", "name": "O-glycan_b-D-GlcpNAc_538", "attachedby": "rxn.Q09324-1", "detachedby": "", "parentid": "O152" }, { "id": "O538", "name": "O-glycan_b-D-GlcpNAc_538", "attachedby": "rxn.Q5JCT0-1", "detachedby": "", "parentid": "O152" }, { "id": "O538", "name": "O-glycan_b-D-GlcpNAc_538", "attachedby": "rxn.Q8N0V5-1", "detachedby": "", "parentid": "O152" }, { "id": "O555", "name": "O-glycan_b-D-Galp_555", "attachedby": "rxn.O60909-1", "detachedby": "", "parentid": "O153" }, { "id": "O555", "name": "O-glycan_b-D-Galp_555", "attachedby": "rxn.P15291-1", "detachedby": "", "parentid": "O153" }, { "id": "O555", "name": "O-glycan_b-D-Galp_555", "attachedby": "rxn.P15535-1", "detachedby": "", "parentid": "O153" }, { "id": "O555", "name": "O-glycan_b-D-Galp_555", "attachedby": "rxn.Q9Z2Y2-1", "detachedby": "", "parentid": "O153" } ], "composition": [ { "name": "6-Deoxy-Hexose", "residue": "dhex", "count": 0, "cid": "840", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/840" }, { "name": "Hexose", "residue": "hex", "count": 4, "cid": "206", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/206" }, { "name": "N-Acetylhexosamine", "residue": "hexnac", "count": 4, "cid": "899", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/899" }, { "name": "Hexuronic Acid", "residue": "hexa", "count": 0, "cid": "610", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/610" }, { "name": "2-Amino-2-Deoxy-Hexose", "residue": "hexn", "count": 0, "cid": "739", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/739" }, { "name": "N-Acetyl-Neuraminic Acid", "residue": "neuac", "count": 0, "cid": "439197", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439197" }, { "name": "N-Glycolyl-Neuraminic Acid", "residue": "neugc", "count": 0, "cid": "440001", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/440001" }, { "name": "Phosphate", "residue": "p", "count": 0, "cid": "1061", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1061" }, { "name": "Pentose", "residue": "pent", "count": 0, "cid": "229", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/229" }, { "name": "Sulfate", "residue": "s", "count": 0, "cid": "1117", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1117" }, { "name": "Other", "residue": "other", "count": 0 } ], "composition_expanded": [ { "name": "Alditol", "residue": "aldi", "count": 0 }, { "name": "6-Deoxy-Hexose", "residue": "dhex", "count": 0, "cid": "840", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/840" }, { "name": "6-Deoxy-Hexitol", "residue": "dhex+aldi", "count": 0 }, { "name": "L-Fucose", "residue": "fuc", "count": 0, "cid": "17106", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/17106" }, { "name": "L-Fucitol", "residue": "fuc+aldi", "count": 0, "cid": "445724", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/445724" }, { "name": "D-Galactose", "residue": "gal", "count": 4, "cid": "6036", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/6036" }, { "name": "D-Galactitol", "residue": "gal+aldi", "count": 0, "cid": "11850", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/11850" }, { "name": "N-Acetyl-D-galactosamine", "residue": "galnac", "count": 1, "cid": "35717", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/35717" }, { "name": "N-Acetylgalactosaminitol", "residue": "galnac+aldi", "count": 0, "cid": "165880", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/165880" }, { "name": "D-Galacturonic Acid", "residue": "gala", "count": 0, "cid": "439215", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439215" }, { "name": "D-Glucose", "residue": "glc", "count": 0, "cid": "5793", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/5793" }, { "name": "D-Glucitol", "residue": "glc+aldi", "count": 0, "cid": "5780", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/5780" }, { "name": "D-Glucuronic acid", "residue": "glca", "count": 0, "cid": "94715", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/94715" }, { "name": "D-Glucosamine", "residue": "glcn", "count": 0, "cid": "439213", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439213" }, { "name": "N-Acetyl-D-Glucosamine", "residue": "glcnac", "count": 3, "cid": "439174", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439174" }, { "name": "N-Acetyl-D-glucosaminitol", "residue": "glcnac+aldi", "count": 0, "cid": "165206", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/165206" }, { "name": "Hexose", "residue": "hex", "count": 4, "cid": "206", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/206" }, { "name": "N-Acetylhexosamine", "residue": "hexnac", "count": 4, "cid": "899", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/899" }, { "name": "Hexuronic Acid", "residue": "hexa", "count": 0, "cid": "610", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/610" }, { "name": "2-Amino-2-Deoxy-Hexose", "residue": "hexn", "count": 0, "cid": "739", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/739" }, { "name": "Hexitol", "residue": "hex+aldi", "count": 0, "cid": "453", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/453" }, { "name": "N-Acetylhexosaminitol", "residue": "hexnac+aldi", "count": 0 }, { "name": "L-Iduronic acid", "residue": "idoa", "count": 0, "cid": "441039", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/441039" }, { "name": "D-Mannose", "residue": "man", "count": 0, "cid": "18950", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/18950" }, { "name": "D-Mannitol", "residue": "man+aldi", "count": 0, "cid": "6251", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/6251" }, { "name": "N-Acetyl-D-mannosamine", "residue": "mannac", "count": 0, "cid": "439281", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439281" }, { "name": "Methyl", "residue": "me", "count": 0 }, { "name": "N-Acetyl-Neuraminic Acid", "residue": "neuac", "count": 0, "cid": "439197", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439197" }, { "name": "N-Glycolyl-Neuraminic Acid", "residue": "neugc", "count": 0, "cid": "440001", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/440001" }, { "name": "Phosphate", "residue": "p", "count": 0, "cid": "1061", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1061" }, { "name": "Pentose", "residue": "pent", "count": 0, "cid": "229", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/229" }, { "name": "Sulfate", "residue": "s", "count": 0, "cid": "1117", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1117" }, { "name": "Sialic acid", "residue": "sia", "count": 0 }, { "name": "Other", "residue": "other", "count": 0 }, { "name": "Floating substituent", "residue": "x", "count": 0 }, { "name": "D-Xylose", "residue": "xyl", "count": 0, "cid": "135191", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/135191" }, { "name": "Ketodeoxynononic acid", "residue": "kdn", "count": 0, "cid": "13991616", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/13991616" } ], "motifs": [ { "id": "GGM.000001", "name": "Type 2 LN", "synonym": "N-acetyllactosamine", "keywords": "LacNAc; N-acetyllactosamine; N-acetyllactosamine type 2" } ], "interactions": [], "expression": [ { "category": "tissue", "tissue": { "name": "milk", "namespace": "UBERON", "id": "0001913", "url": "http://purl.obolibrary.org/obo/UBERON_0001913" }, "cell_line": {}, "abundance": "", "evidence": [ { "id": "179", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/structures/179" }, { "id": "2737211", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/2737211" } ], "uniprot_canonical_ac": "P01876-2" } ], "subsumption": [ { "related_accession": "G04533YY", "relationship": "ancestor" }, { "related_accession": "G33094KK", "relationship": "ancestor" }, { "related_accession": "G37528JY", "relationship": "ancestor" }, { "related_accession": "G51216AJ", "relationship": "ancestor" }, { "related_accession": "G69824GC", "relationship": "ancestor" }, { "related_accession": "G72787SB", "relationship": "ancestor" }, { "related_accession": "G75216TK", "relationship": "ancestor" }, { "related_accession": "G81295CK", "relationship": "ancestor" }, { "related_accession": "G86574WP", "relationship": "ancestor" }, { "related_accession": "G72787SB", "relationship": "basecomposition" }, { "related_accession": "G75216TK", "relationship": "composition" }, { "related_accession": "G37528JY", "relationship": "subsumedby" }, { "related_accession": "G51216AJ", "relationship": "subsumedby" }, { "related_accession": "G33094KK", "relationship": "topology" } ], "names": [], "keywords": [ "fully_determined" ], "glycotree_pathways": [], "dictionary": {}, "biomarkers": [], "section_stats": [ { "table_id": "glycoprotein", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_id", "tax_name", "tax_common_name" ] }, { "table_id": "expression", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [ "category", "tissue.name", "tissue.namespace", "tissue.id", "tissue.url", "abundance", "uniprot_canonical_ac" ] }, { "table_id": "expression_tissue", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [ "category", "tissue.name", "tissue.namespace", "tissue.id", "tissue.url", "abundance", "uniprot_canonical_ac" ] }, { "table_id": "expression_cell_line", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [ "category", "abundance", "uniprot_canonical_ac" ] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }