{
    "bcoid": "GLY_000850",
    "title": "Dicty Reaction Participants (Rhea)",
    "description": "The Dicty Reaction Participants (Rhea) dataset offers detailed information on enzymatic participants ...",
    "filename_list": "dicty_protein_participants_rhea.csv",
    "filename": "dicty_protein_participants_rhea.csv",
    "filetype": "csv",
    "categories": {
        "species": [
            "Dictyostelium discoideum"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "Reaction Participants (Rhea)"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ]
    },
    "minitable": {
        "content": [
            [
                "49288...",
                "Q54KY1-1..."
            ],
            [
                "18181...",
                "Q54RR4-1..."
            ]
        ],
        "headers": [
            "reaction_id...",
            "participant_..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "reaction_id"
                },
                {
                    "type": "string",
                    "label": "participant_id"
                },
                {
                    "type": "string",
                    "label": "participant_name"
                },
                {
                    "type": "string",
                    "label": "role"
                },
                {
                    "type": "string",
                    "label": "xref_id"
                },
                {
                    "type": "string",
                    "label": "xref_type"
                }
            ],
            [
                "49288",
                "Q54KY1-1",
                "",
                "enzyme",
                "Q54KY1",
                "UniProtKB"
            ],
            [
                "18181",
                "Q54RR4-1",
                "",
                "enzyme",
                "Q54RR4",
                "UniProtKB"
            ]
        ]
    },
    "readme": "Name\n   - Dicty Reaction Participants (Rhea)\n\nVersion\n   - v-2.8.1\n\nModified on\n   - 2025-03-06T15:22:42.037Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The Dicty Reaction Participants (Rhea) dataset offers detailed information on enzymatic participants involved in chemical and transport reactions specific to Dictyostelium discoideum [TaxID: 44689]. Rhea is a rigorously curated knowledgebase that catalogs biologically significant reactions and serves as the authoritative standard for enzyme and transporter annotation in UniProtKB. To characterize reaction participants, Rhea leverages the Chemical Entities of Biological Interest (ChEBI) dictionary.\n\nDescription Domain\n\n   Pipeline Steps\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-dictyostelium-discoideum.nt\n      URI: https:/data.glygen.org/ln2downloads/ebi/2025_01_17/uniprot-proteome-dictyostelium-discoideum.nt\n   Output Subdomain\n      Name: dicty_protein_participants_rhea.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.8.1/reviewed/dicty_protein_participants_rhea.csv\n      Name: dicty_protein_participants_rhea.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.8.1/reviewed/dicty_protein_participants_rhea.stat.csv\n\nFields\n      Name: \"reaction_id\"\n     Description: \"The identifier assigned to a reaction in Reactome database\"\n      Unique Values: \"771\"\n      Name: \"participant_id\"\n     Description: \"\"\n      Unique Values: \"1202\"\n      Name: \"participant_name\"\n     Description: \"\"\n      Unique Values: \"1\"\n      Name: \"role\"\n     Description: \"\"\n      Unique Values: \"1\"\n      Name: \"xref_id\"\n     Description: \"ID of the X-ref\"\n      Unique Values: \"1202\"\n      Name: \"xref_type\"\n     Description: \"\"\n      Unique Values: \"1\"",
    "downloadurl": "/ln2data/releases/data/v-2.8.1/reviewed/dicty_protein_participants_rhea.csv"
}