{
    "bcoid": "GLY_000832",
    "title": "Dicty Protein Canonical sequences (UniProtKB)",
    "description": "The Dicty Protein Canonical (UniProtKB) Sequences dataset contains Dictyostelium discoideum [taxid:44689] ...",
    "filename_list": "dicty_protein_canonicalsequences.fasta",
    "filename": "dicty_protein_canonicalsequences.fasta",
    "filetype": "fasta",
    "categories": {
        "species": [
            "Dictyostelium discoideum"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "Canonical Protein fasta Sequences"
        ],
        "file_type": [
            "fasta"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ]
    },
    "iconfilename": "fasta_icon_all.png",
    "sampledata": {
        "type": "html",
        "data": "<pre>\n>tr|Q54I96-1|Q54I96_DICDI Isoform 1 of Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN= PE=4 SV=1 CANONICAL=Q54I96-1\nMKNKFIIILFSLLLLLCLDLMIINAEVFQDYEIKDINEIEQIHDVLEGDEWKSPYQKRED\nARLAQQQDEMRRLTGYATTGKLPTNVNRCTGIKCPSGYTCNHDGVCMKKCGRVWCIVSTD\nCEKDLFGIQFCRPPRGKKP\n\n\n>tr|Q54PT0-1|Q54PT0_DICDI Isoform 1 of Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN= PE=3 SV=1 CANONICAL=Q54PT0-1\nMDYSKKLCVITGASSGFGEALAKILSKSGYSLLLLARRIEKMQEFNLPNCICQKVDVTNY\nDEFEKAVREAESFFGCKTDLMVNNAGVMLLGHIWEQDMKDWDKTLDVNVKGVLHGCRIVL\nKDMMDRNGGTIINVSSIAGLDPYELHSVYGASKYGVHCISNTIRKEVAQKNVRVMIISPG\nIAETELLSHNKSNEKVFNTYNSWKDTLKGQSMNPYNVANSIKFMYEMPQEITIRDLIICP\nTKQE\n\n\n>sp|Q54PT1-1|GDAP2_DICDI Isoform 1 of Protein GDAP2 homolog OS=Dictyostelium discoideum OX=44689 GN=gdap2 PE=3 SV=1 CANONICAL=Q54PT1-1\nMTTTPIFSGKIDYKEIKTWDQTEFDEKNLVNDKDKVPIENFHINGPIQFKIDTEINSRIC\nLWMGDICNLNTDTIVYSNSKTLTESDTISDKIFKYGGSEMMNDIQKNGECRYGESIITSG\nGNLPSRFVVHTVCPTYNPKYLSAAENALNSCYRSAFHLSMDVKSKSISFSTLHSEKRQFP\nSVGGCHIALRTIRRFLEKPFSKSFEKVILAINTFEDLRLYEQMLPIYFPRNQQELKFSQI\nSLPKDVGDENGEAIVESRKIRIIETPSTIIREPEDYNCFYSNNNNNNNNVNNVNNNNSNN\nNNSNNNNSSSNNIDIIQKNNKNEFNNYKYDSIDKILNPFSSNFSSSPYDATMDNDSFMLK\nREDPDIEKRRQFSKKSEKQIENEKLKAQFQTLLTRSKVEDLSDVSRLNFTLQTTDDQNRP\nIVVIIGSQLNSRKDLYDQVLLYLIRVLEQTIQRGNFSIIYFHSNMSSQQSPDLSWLKKLL\nEIFELKYNNYLKDFNIVHPTFLLKTTLFISKSILGDKGVLSKIIYHENMNKISKLISKCN\nIPKSIFSYEFSKNEIDNFSFSFDNDVTL\n\n\n>sp|Q54PT2-1|VPS4_DICDI Isoform 1 of Vacuolar protein sorting-associated protein 4 OS=Dictyostelium discoideum OX=44689 GN=vps4 PE=3 SV=1 CANONICAL=Q54PT2-1\nMGDVNFLQKAIQIVQQATEQDNAKNYAEAHRLYIQSLEWFTTALKYEKSERSKATIKAKT\nLEYLQRAEQLKEYLDKSKNKKPVAVGGNKSNSAGSANGAGKSAKEDDEDMDPEDKKRNDS\nLSSSIVTTKPNVKWDDVAGLYQAKEYLKEAVIFPIKFPQMFTGNRKPWKGILLYGPPGTG\nKSYLAKAVATEISSTFFSISPSDIVTKWLGDSEKLVKQLFEMAREKNNSVIFIDEVDSLC\nSSRNDQESESARRIKTEFLIQMNGVGNDSDGILVLAATNIPWGLDLAIRRRFEKRIYIGL\nPEPQARAKMFQIHIGSTPNTLVQADYKKLADLTEGYSGSDIGSLVKDAIMQPVRAVQCAT\nHFKQIRAPSREDPSVMTDYVTPCSPGDPLAQEMTWMDIDPTKLKEPEITIADCLKSLRVI\nKPSVNKADLDRYVEFTNDFGQDGV\n\n\n>sp|Q54PT3-1|C556A_DICDI Isoform 1 of Probable cytochrome P450 556A1 OS=Dictyostelium discoideum OX=44689 GN=cyp556A1 PE=3 SV=1 CANONICAL=Q54PT3-1\nMFLTSILYTIIIILIFYKGLEYLIEKRSFPLVHPIKGVMNGTKPYFIFGDLPFQRLLNLK\nPKLKELGSIYFRWFFWYPIVEIKDINAIQYVYNEKSNNYSLYWNLNKSSNFILTGSEIKR\nFFRIYYCAFNCKDSLQRIMPVIKSQVFDFIHSHKFQNSTLSTNDDVTNFMLKLLSRVYLG\nSSDEAYHCFKANYKKFNKSYLDFFHYLFPTLLKIPSKFSRKYIKNKNKRALYQVLAMKAY\nYGVVKQSSDDHIEESMINIIAETSYNDKEGLSLEEIKMPSYLLNASSIKGPMIMVENLMF\nQLIEKSEIESKIRKEIKLVFEKNGKDVNSFDFDDIMEMKYLEATLDEINRLYPPFPKLMP\nRQTKESDRILGYHIPKGTMISCPVADILRDPSNFQDPLTFKPERQLIFSNPKFASPSITS\nIQEINGLSSSSSNSFALHHRSLPSINNNNNNNNNNNNNNNNNNNNNNNNNSNNNSINGNN\nKNNNRNCIQSFNNSALKKSFLSDSSSIIDNIVGTNRVDKLKLDSLNENSNINNNNNKDLL\nNVPNIIEINKNNPISNNKYNSYNNLTIEERNQRIIKNLPWGIGSKKCLGKELAKLIVKTI\nIVILYSQYTFDKHLDENDEELCDTNNQPKIQITFNPEIKPPLLLKSRKLFSISQPKQ\n\n\n>tr|Q54PT4-1|Q54PT4_DICDI Isoform 1 of Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN= PE=3 SV=1 CANONICAL=Q54PT4-1\nMIKLFNNNNNLIRFQQILKRNYSNKKVKNVEDINIDSSNDNNTLVQQYVNKEYESYKIHK\nPVFIKEVLEILNPQPNKVYIDATFGMGGHSRGILETCKDCYVIAFDRDPKVFEMTKPLRS\nEFKDRLITINSTFSSMRSALKEKNLDHLKISGILYDFGVSSYQIDTADRGFSFKKELEGP\nLDMRMNQNSSQITAYDIINTFSEKDLRDIFFYYGEEKHTKNIANEILRKRKIEPIKNTSD\nLVKIVESSIPYPMALKTISRVFRSLRMFVNDELNEIKIGLTQGEQLLEPNSPLLAISFHS\nIEDRIVKQYLNKYTTIEEPTFKFSPTYKSPIFPSKEELEWNPRSKSAILRTAIRTSNKPI\nSSNYNII\n\n\n>tr|Q54PT5-1|Q54PT5_DICDI Isoform 1 of THH1/TOM1/TOM3 domain-containing protein OS=Dictyostelium discoideum OX=44689 GN= PE=3 SV=1 CANONICAL=Q54PT5-1\nMALKYFNYDVIHLVLSFLYFLVSIFCVFSFIKRPKKQQNTQQFIFYPLLFLGVIVRSVFM\nFLQPFVREKSIVIPNQANVLLNTLPSFTFFSTYLIVLFIWVEIYMISYGSMMRSIKSLPI\nIFNISTCIMYIVLIILYILDFTLYKLDYSTVSTFTTLPEIIIGYYDVGCFILASFLFLFF\nGISLVVKFRHQQKNFAEDKRKVILRRITFLTGLICCCFLLRAAITCFALIDLHLISGYWW\nWFDGAYFTVLEIVPLSIMLYLLQMDRNKTRIPSEYNEKTSLINSNSA\n\n\n>sp|Q54PT6-1|ETFR1_DICDI Isoform 1 of Electron transfer flavoprotein regulatory factor 1 homolog OS=Dictyostelium discoideum OX=44689 GN=etfrf1 PE=3 SV=1 CANONICAL=Q54PT6-1\nMENTHSMISFKTLNKLKIQQLFSIKNKSFYSTSSPISSTVNSSGNDNIDIENDKEIKKKN\nRLIVKDLYKQLMYLGRVGFLGVDYIRDKAKPQFISNANLTDNNKINECIERTKYVIKEIE\nAMNRFHKYRNLKKSYDLEFQKVNDNFLNLDNDQNKIK\n\n\n>tr|Q54PT7-1|Q54PT7_DICDI Isoform 1 of Saposin B domain-containing protein OS=Dictyostelium discoideum OX=44689 GN= PE=4 SV=1 CANONICAL=Q54PT7-1\nMKSISFICLLIIGFLLIGNSFANDSIKSDEITCNLCNAIVGFAEKYVTTNATEQELIKKL\nDDYCGILPSEFSQSCVETVNNYGVLIIRLLINKEDADNICIMIELCPKSSSSSPSLFLIN\nENNSNSNGTDCEICTFITKYAENLLEANKTIEDIVKVVDDFCKVLPSQYKTDCVAMASNY\nIPAIVKMLENNYNAEQVCQKLSFCLPPPPPSTEGTTLCDLCLDFANDAIEIVENSGDVEA\nQLLKECKYFFSFIPTIENQCEKIISENFDAIVNEIQDHINPTSLCQNFLHICN\n\n\n</pre>"
    },
    "readme": "Name\n   - Dicty Protein Canonical sequences (UniProtKB)\n\nVersion\n   - v-2.8.1\n\nCreated on\n  - 2025-03-04T15:48:44\n\nModified on\n   - 2025-03-04T15:51:22.203Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The Dicty Protein Canonical (UniProtKB) Sequences dataset contains Dictyostelium discoideum [taxid:44689] canonical protein fasta sequences from the UniProtKB database. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen.\n\nDescription Domain\n   Keywords\n   - protein sequence\n   - fasta\n   - UniProtKB canonical accessions\n\n   Pipeline Steps\n   - Step-1: The script loads the UniProtKB fasta sequence for all dicty canonical accessions data from the triplestore containing triples from nt file and extracts it into a dataset as fasta format\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-dictyostelium-discoideum.nt\n      URI: https:/data.glygen.org/ln2downloads/ebi/2025_01_17/uniprot-proteome-dictyostelium-discoideum.nt\n   Output Subdomain\n      Name: dicty_protein_canonicalsequences.fasta\n      URI: https:/data.glygen.org/ln2releases/data/v-2.8.1/reviewed/dicty_protein_canonicalsequences.fasta\n      Name: dicty_protein_canonicalsequences.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.8.1/reviewed/dicty_protein_canonicalsequences.stat.csv\n\nFields\n      Name: \"sequence\"\n     Description: \"Amino acid sequence\"\n      Unique Values: \"12718\"",
    "downloadurl": "/ln2data/releases/data/v-2.8.1/reviewed/dicty_protein_canonicalsequences.fasta"
}