{
    "bcoid": "GLY_000735",
    "title": "Fruitfly UniProtKB Xref O-GlcNAcAtlas",
    "description": "The Fruitfly UniProtKB Xref O-GlcNAcAtlas dataset contains fruitfly [taxid:7227] UniProtKB canonical ...",
    "filename_list": "fruitfly_protein_xref_oglcnac_atlas.csv",
    "filename": "fruitfly_protein_xref_oglcnac_atlas.csv",
    "filetype": "csv",
    "categories": {
        "species": [
            "Drosophila melanogaster"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "O-GlcNAcAtlas cross-references"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ]
    },
    "minitable": {
        "content": [
            [
                "Q9VWN5-1...",
                "protein_xref..."
            ],
            [
                "Q9V6L0-1...",
                "protein_xref..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "xref_key..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "xref_key"
                },
                {
                    "type": "string",
                    "label": "xref_id"
                },
                {
                    "type": "string",
                    "label": "xref_label"
                }
            ],
            [
                "Q9VWN5-1",
                "protein_xref_oglcnac_atlas",
                "Q9VWN5",
                "O-GlcNAc Atlas"
            ],
            [
                "Q9V6L0-1",
                "protein_xref_oglcnac_atlas",
                "Q9V6L0",
                "O-GlcNAc Atlas"
            ]
        ]
    },
    "readme": "Name\n   - Fruitfly UniProtKB Xref O-GlcNAcAtlas\n\nVersion\n   - v-2.8.1\n\nCreated on\n  - 2023-03-14T18:15:28.807Z\n\nModified on\n   - 2024-05-17T11:24:11.181Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The Fruitfly UniProtKB Xref O-GlcNAcAtlas dataset contains fruitfly [taxid:7227] UniProtKB canonical accessions cross-referenced to O-GlcNAcAtlas database accessions/identifiers.  If you use this dataset please provide proper attribution to O-GlcNAcAtlas and GlyGen. O-GlcNAcAtlas is a a rigorously curated database for experimentally identified O-GlcNAc sites/proteins (https://oglcnac.org/atlas/)\n\nDescription Domain\n   Keywords\n   - Cross-references\n   - Drosophila\n   - O-GlcNAcAtlas\n\n   Pipeline Steps\n   - Step-1: The script loads the UniProtKB canonical accessions that are cross-referenced to O-GlcNAcAtlas database accessions/identifiers from the triplestore containing triples from nt file and extracts the data as a csv dataset.\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: fruitfly_proteoform_glycosylation_sites_oglcnac_atlas.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.8.1/reviewed/fruitfly_proteoform_glycosylation_sites_oglcnac_atlas.csv\n   Output Subdomain\n      Name: fruitfly_protein_xref_oglcnac_atlas.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.8.1/reviewed/fruitfly_protein_xref_oglcnac_atlas.csv\n      Name: fruitfly_protein_xref_oglcnac_atlas.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.8.1/reviewed/fruitfly_protein_xref_oglcnac_atlas.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\n     Description: \"\"\n      Unique Values: \"30\"\n      Name: \"xref_key\"\n     Description: \"Source key associated to the  xref_id\"\n      Unique Values: \"1\"\n      Name: \"xref_id\"\n     Description: \"ID of the X-ref\"\n      Unique Values: \"30\"\n      Name: \"xref_label\"\n     Description: \"Label/Name associated with x-ref\"\n      Unique Values: \"1\"",
    "downloadurl": "/ln2data/releases/data/v-2.8.1/reviewed/fruitfly_protein_xref_oglcnac_atlas.csv"
}