{
    "bcoid": "GLY_000722",
    "title": "Human Literature Mutations Citations",
    "description": "The Human Literature Mutations Citations contains details of the publication present in the dataset Human ...",
    "filename_list": "human_protein_citations_mutation_literature.csv",
    "filename": "human_protein_citations_mutation_literature.csv",
    "filetype": "csv",
    "categories": {
        "species": [
            "Homo sapiens"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "Literature Mutation Citations"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ]
    },
    "minitable": {
        "content": [
            [
                "O60674-1...",
                "Rapid identi..."
            ],
            [
                "P10144-1...",
                "Granzyme B g..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "title..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "title"
                },
                {
                    "type": "string",
                    "label": "journal_name"
                },
                {
                    "type": "string",
                    "label": "publication_date"
                },
                {
                    "type": "string",
                    "label": "authors"
                },
                {
                    "type": "string",
                    "label": "xref_key"
                },
                {
                    "type": "string",
                    "label": "xref_id"
                },
                {
                    "type": "string",
                    "label": "src_xref_key"
                },
                {
                    "type": "string",
                    "label": "src_xref_id"
                }
            ],
            [
                "O60674-1",
                "Rapid identification of JAK2 exon 12 mutations using high resolution melting analysis.",
                "Haematologica",
                "2008 Oct",
                "Jones AV, Cross NC, White HE, Green AR, Scott LM",
                "protein_xref_pubmed",
                "18698085",
                "protein_xref_entrez",
                "3717"
            ],
            [
                "P10144-1",
                "Granzyme B gene polymorphisms, colorectal cancer risk, and metastasis.",
                "Journal of cancer research and therapeutics",
                "2014 Jul-Sep",
                "Mhaidat NM, Al-azzam SI, Alzoubi KH, Khabour OF, Gharaibeh BF",
                "protein_xref_pubmed",
                "25313744",
                "protein_xref_entrez",
                "3002"
            ]
        ]
    },
    "readme": "Name\n   - Human Literature Mutations Citations\n\nVersion\n   - v-2.8.1\n\nCreated on\n  - \n\nModified on\n   - 2024-05-17T11:24:10.684Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The Human Literature Mutations Citations contains details of the publication present in the dataset Human Literature Mutations https://data.glygen.org/GLY_000463.\n\nDescription Domain\n   Keywords\n   - Literature\n   - Mutation\n   - Publications\n   - Citations\n   - PubMed\n\n   Pipeline Steps\n   - Step-1: The script extracts the PMID from the dataset and uses the Entrez API to retrieve the publication details and extracts in a csv dataset\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: human_protein_mutation_literature.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.8.1/reviewed/human_protein_mutation_literature.csv\n   Output Subdomain\n      Name: human_protein_citations_mutation_literature.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.8.1/reviewed/human_protein_citations_mutation_literature.csv\n      Name: human_protein_citations_mutation_literature.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.8.1/reviewed/human_protein_citations_mutation_literature.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\n     Description: \"\"\n      Unique Values: \"458\"\n      Name: \"title\"\n     Description: \"Title of the published article in the journal\"\n      Unique Values: \"4546\"\n      Name: \"journal_name\"\n     Description: \"The name of the journal in which the article is published\"\n      Unique Values: \"881\"\n      Name: \"publication_date\"\n     Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n      Unique Values: \"1259\"\n      Name: \"authors\"\n     Description: \"NA\"\n      Unique Values: \"4509\"\n      Name: \"xref_key\"\n     Description: \"Source key associated to the  xref_id\"\n      Unique Values: \"1\"\n      Name: \"xref_id\"\n     Description: \"ID of the X-ref\"\n      Unique Values: \"4557\"\n      Name: \"src_xref_key\"\n     Description: \"Source Xref  key\"\n      Unique Values: \"1\"\n      Name: \"src_xref_id\"\n     Description: \"Source X-ref ID\"\n      Unique Values: \"462\"",
    "downloadurl": "/ln2data/releases/data/v-2.8.1/reviewed/human_protein_citations_mutation_literature.csv"
}