{
    "bcoid": "GLY_000603",
    "title": "Glycan Pathway Reactome",
    "description": "-",
    "filename_list": "glycan_pathway_reactome.csv",
    "filename": "glycan_pathway_reactome.csv",
    "filetype": "csv",
    "categories": {
        "molecule": [
            "Glycan"
        ],
        "tag": [
            "Pathway Reactome"
        ],
        "status": [
            "Reviewed"
        ],
        "file_type": [
            "csv"
        ],
        "scope": [
            "internal"
        ],
        "species": [
            "Homo sapiens",
            "Mus musculus",
            "Rattus norvegicus",
            "Drosophila melanogaster",
            "Severe acute respiratory syndrome coronavirus 2",
            "Saccharomyces cerevisiae",
            "Rattus",
            "Sus scrofa"
        ]
    },
    "minitable": {
        "content": [
            [
                "G71142DF...",
                "beta-D-gluco..."
            ],
            [
                "G71142DF...",
                "beta-D-gluco..."
            ]
        ],
        "headers": [
            "glytoucan_ac...",
            "compound_nam..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "glytoucan_ac"
                },
                {
                    "type": "string",
                    "label": "compound_name"
                },
                {
                    "type": "string",
                    "label": "reactome_pathway_id"
                },
                {
                    "type": "string",
                    "label": "pathway_name"
                },
                {
                    "type": "string",
                    "label": "species_scientific_name"
                },
                {
                    "type": "string",
                    "label": "xref_key"
                },
                {
                    "type": "string",
                    "label": "xref_id"
                }
            ],
            [
                "G71142DF",
                "beta-D-glucose [endoplasmic reticulum lumen]",
                "R-HSA-9683686",
                "Maturation of spike protein",
                "Homo sapiens",
                "glycan_xref_reactome",
                "R-ALL-9683087"
            ],
            [
                "G71142DF",
                "beta-D-glucose [endoplasmic reticulum lumen]",
                "R-HSA-9694548",
                "Maturation of spike protein",
                "Homo sapiens",
                "glycan_xref_reactome",
                "R-ALL-9683087"
            ]
        ]
    },
    "readme": "Name\n   - Glycan Pathway Reactome\n\nVersion\n   - v-2.8.1\n\nCreated on\n  - 2021-10-15T07:09:29.335203\n\nModified on\n   - 2024-05-17T11:24:06.196Z\n\nCreated by\n   -  [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - -\n\nDescription Domain\n   Keywords\n   - Glycan\n   - Pathway\n   - Reactome\n\n   Pipeline Steps\n   - Step-1: \n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-species-agnostic-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: glycan_xref_chebi.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.8.1/reviewed/glycan_xref_chebi.csv\n      Name: ChEBI2Reactome_PE_Pathway.txt\n      URI: https:/data.glygen.org/ln2downloads/reactome/2025_01_13/ChEBI2Reactome_PE_Pathway.txt\n   Output Subdomain\n      Name: glycan_pathway_reactome.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.8.1/reviewed/glycan_pathway_reactome.csv\n      Name: glycan_pathway_reactome.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.8.1/reviewed/glycan_pathway_reactome.stat.csv\n\nFields\n      Name: \"glytoucan_ac\"\n     Description: \"Unique accession assigned to the registered glycan structure in GlyTouCan database\"\n      Unique Values: \"32\"\n      Name: \"compound_name\"\n     Description: \"\"\n      Unique Values: \"61\"\n      Name: \"reactome_pathway_id\"\n     Description: \"\"\n      Unique Values: \"419\"\n      Name: \"pathway_name\"\n     Description: \"\"\n      Unique Values: \"57\"\n      Name: \"species_scientific_name\"\n     Description: \"\"\n      Unique Values: \"15\"\n      Name: \"xref_key\"\n     Description: \"Source key associated to the  xref_id\"\n      Unique Values: \"1\"\n      Name: \"xref_id\"\n     Description: \"ID of the X-ref\"\n      Unique Values: \"61\"",
    "downloadurl": "/ln2data/releases/data/v-2.8.1/reviewed/glycan_pathway_reactome.csv"
}