{
    "object_id": "https://biocomputeobject.org/GLY_000774/v-2.8.1",
    "spec_version": "1.3.0",
    "etag": "3b68dd591fc162d41824685062948598",
    "provenance_domain": {
        "name": "Yeast Protein Site Annotation",
        "version": "v-2.8.1",
        "license": "https://creativecommons.org/licenses/by/4.0/",
        "created": "2022-08-31T11:08:19.037259",
        "modified": "2025-03-04T18:41:16.899Z",
        "contributors": [
            {
                "name": "Jeet Vora",
                "affiliation": "The George Washington University",
                "email": "jeetvora@gwu.edu",
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                ]
            },
            {
                "affiliation": "The George Washington University",
                "contribution": [
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                ],
                "name": "Robel Kahsay",
                "email": "rykahsay@gwu.edu"
            },
            {
                "affiliation": "EMBL-EBI-UniProt",
                "contribution": [
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                ],
                "name": "Maria Martin",
                "email": "martin@ebi.ac.uk"
            },
            {
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                ],
                "name": "Preethi Vasudev",
                "email": "pvasudev@ebi.ac.uk"
            },
            {
                "affiliation": "The George Washington University",
                "contribution": [
                    "createdBy"
                ],
                "name": "Karina Martinez",
                "email": "karinamartinez@gwu.edu"
            },
            {
                "name": "Jingyue Wu",
                "affiliation": "The George Washington University",
                "contribution": [
                    "createdBy"
                ],
                "email": "jingyue.wu@email.gwu.edu"
            },
            {
                "name": "Luke Johnson",
                "affiliation": "The George Washington University",
                "contribution": [
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                ],
                "email": "luke.johnson@email.gwu.edu"
            },
            {
                "name": "Urnisha Bhuiyan",
                "affiliation": "The George Washington University",
                "contribution": [
                    "createdBy"
                ],
                "email": "sbhuiyan28@email.gwu.edu"
            },
            {
                "name": "Cyrus Au-Yeung",
                "affiliation": "The George Washington University",
                "contribution": [
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                ],
                "email": "cyruschauyeung@gwu.edu"
            },
            {
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                "affiliation": "The George Washington University",
                "contribution": [
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                "email": "k.warner1@gwu.edu"
            }
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    },
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        "The Yeast Protein Site Annotation (UniProtKB) dataset contains Saccharomyces cerevisiae S288C [taxid:559292] site annotations for UniProtKB canonical accessions. The dataset contains information about UniProtKB annotations with their amino acid range.  If you use this dataset please give proper attribution to UniProtKB and GlyGen"
    ],
    "description_domain": {
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            {
                "step_number": 1,
                "name": "make-protein-dataset.py",
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                "input_list": [],
                "prerequisite": [],
                "output_list": []
            }
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                "uri": {
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                    "filename": "yeast_protein_site_annotation_uniprotkb.csv"
                }
            },
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                }
            },
            {
                "uri": {
                    "filename": "uniprot-proteome-saccharomyces-cerevisiae.nt",
                    "uri": "https:/data.glygen.org/ln2downloads/ebi/2025_01_17/uniprot-proteome-saccharomyces-cerevisiae.nt"
                }
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        ]
    },
    "execution_domain": {
        "script": [
            {
                "uri": {
                    "uri": "https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py",
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            }
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                },
                "dataset_categories": [
                    {
                        "category_value": "Saccharomyces cerevisiae S288C",
                        "category_name": "species"
                    },
                    {
                        "category_value": "Protein",
                        "category_name": "molecule"
                    },
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        }
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    "error_domain": {}
}