{ "uniprot_canonical_ac": "A0A1D5P882-1", "uniprot_ac": "A0A1D5P882", "uniprot_id": "A0A1D5P882_CHICK", "mass": { "chemical_mass": 62649.0, "monoisotopic_mass": 62649.0 }, "refseq": { "ac": "XP_015132463", "name": "arf-GAP domain and FG repeat-containing protein 1 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_015132463" }, "gene_names": [ { "name": "AGFG1", "resource": "UniProtKB", "type": "recommended", "url": "https://www.uniprot.org/uniprot/A0A1D5P882", "id": "A0A1D5P882" }, { "name": "AGFG1", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_015132463", "id": "XP_015132463" } ], "protein_names": [ { "name": "ArfGAP with FG repeats 1", "resource": "UniProtKB", "type": "synonym", "url": "https://www.uniprot.org/uniprotkb/A0A1D5P882/entry#names_and_taxonomy", "id": "A0A1D5P882" }, { "name": "arf-GAP domain and FG repeat-containing protein 1 isoform X1", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_015132463", "id": "XP_015132463" } ], "function": [ { "annotation": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Gallus gallus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 9.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_052540.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length.", "evidence": [ { "database": "RefSeq", "id": "XP_015132463", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_015132463" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Gallus gallus", "taxid": 9031, "evidence": [ { "database": "UniProtKB", "id": "A0A1D5P882", "url": "https://www.uniprot.org/uniprot/A0A1D5P882" } ], "common_name": "Chicken", "glygen_name": "Chicken", "reference_species": "Gallus gallus [9031]" } ], "gene": [ { "name": "AGFG1", "url": "https://www.uniprot.org/uniprot/A0A1D5P882", "locus": { "chromosome": "9", "start_pos": 9177776, "end_pos": 9141749, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSGALG00010023830", "url": "https://www.ensembl.org/id/ENSGALG00010023830" } ] } } ], "crossref": [ { "id": "A0A1D5P882", "url": "https://alphafold.ebi.ac.uk/entry/A0A1D5P882", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSGALG00000003052", "url": "https://bgee.org/?page=gene&gene_id=ENSGALG00000003052", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd08857", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd08857", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "424793", "url": "https://www.ncbi.nlm.nih.gov/gene/424793", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001164", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001164", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037278", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037278", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038508", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038508", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052248", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052248", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "gga:424793", "url": "https://www.genome.jp/dbget-bin/www_bget?gga:424793", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SDCKRNK", "url": "https://omabrowser.org/oma/group/SDCKRNK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1D5P882", "url": "https://www.orthodb.org/?gene=A0A1D5P882", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46134", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46134", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46134:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46134:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01412", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01412", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "R-GGA-8856825", "url": "https://www.reactome.org/PathwayBrowser/#R-GGA-8856825", "database": "Reactome", "categories": [ "Protein Classification" ] }, { "id": "R-GGA-8856828", "url": "https://www.reactome.org/PathwayBrowser/#R-GGA-8856828", "database": "Reactome", "categories": [ "Protein Classification" ] }, { "id": "XP_015132463", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_015132463", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A1D5P882", "url": "https://www.uniprot.org/uniprot/A0A1D5P882", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1D5P882-1", "url": "https://www.uniprot.org/uniprot/A0A1D5P882-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8V0ZPA9", "url": "https://www.uniprot.org/uniprot/A0A8V0ZPA9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8V0ZPA9-1", "url": "https://www.uniprot.org/uniprot/A0A8V0ZPA9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8V0ZPC1", "url": "https://www.uniprot.org/uniprot/A0A8V0ZPC1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8V0ZPC1-1", "url": "https://www.uniprot.org/uniprot/A0A8V0ZPC1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8V0ZUI5", "url": "https://www.uniprot.org/uniprot/A0A8V0ZUI5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8V0ZUI5-1", "url": "https://www.uniprot.org/uniprot/A0A8V0ZUI5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8V0ZY62", "url": "https://www.uniprot.org/uniprot/A0A8V0ZY62", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8V0ZY62-1", "url": "https://www.uniprot.org/uniprot/A0A8V0ZY62-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAASAKRKQEEKHLKLLREMSSLPPNRKCFDCDQRGPTYTDMTVGSFVCTSCSGILRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGEAAPALHLNKGTPSQSPVVGRSQGQQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHTAQNSANAGFANFDAFGQSSGSSNFGGFPTASQSSFQPQNTAFRTLSSSCSFGEFTSAFPLQAVHSGSAGSVNANFAHFDNFPKSSSADFGAFNASQSNATVTGASKAAVNKPGLQSADKYAALANLDNIFSAGQGGSEQGSGFSTVVSASAGPALSAPNQSSASSDKYAALAELDSVFSSTATSSNAYTSTSNVSSNAFGTVPVAATSQTQPASSSVPASFGATPSTNPFVAAPVAPVAPSTNPFQTNSRGATGLSGAMHSHIFPHAHFAATFGTASMSMPAGFGTPASYSLPTSFSGNFQQPTFPTQAAFPQQTAFAQQPNGAGFAAFGQAKPVVTPFGQVAAVGVSSNPFMAGAPTGQFPAGNSSTNPFL", "length": 604, "header": "tr|A0A1D5P882-1|A0A1D5P882_CHICK Isoform 1 of ArfGAP with FG repeats 1 OS=Gallus gallus OX=9031 GN=AGFG1 PE=1 SV=1 CANONICAL=A0A1D5P882-1" }, "isoforms": [ { "isoform_ac": "A0A1D5P882-1", "url": "https://www.uniprot.org/uniprotkb/A0A1D5P882/entry#A0A1D5P882-1", "sequence": { "sequence": "MAASAKRKQEEKHLKLLREMSSLPPNRKCFDCDQRGPTYTDMTVGSFVCTSCSGILRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGEAAPALHLNKGTPSQSPVVGRSQGQQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHTAQNSANAGFANFDAFGQSSGSSNFGGFPTASQSSFQPQNTAFRTLSSSCSFGEFTSAFPLQAVHSGSAGSVNANFAHFDNFPKSSSADFGAFNASQSNATVTGASKAAVNKPGLQSADKYAALANLDNIFSAGQGGSEQGSGFSTVVSASAGPALSAPNQSSASSDKYAALAELDSVFSSTATSSNAYTSTSNVSSNAFGTVPVAATSQTQPASSSVPASFGATPSTNPFVAAPVAPVAPSTNPFQTNSRGATGLSGAMHSHIFPHAHFAATFGTASMSMPAGFGTPASYSLPTSFSGNFQQPTFPTQAAFPQQTAFAQQPNGAGFAAFGQAKPVVTPFGQVAAVGVSSNPFMAGAPTGQFPAGNSSTNPFL", "length": 604, "header": "tr|A0A1D5P882-1|A0A1D5P882_CHICK Isoform 1 of ArfGAP with FG repeats 1 OS=Gallus gallus OX=9031 GN=AGFG1 PE=1 SV=1 CANONICAL=A0A1D5P882-1" }, "locus": { "chromosome": "9", "start_pos": 9176642, "end_pos": 9141916, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSGALT00010058086.1", "url": "https://www.ensembl.org/id/ENSGALT00010058086.1" }, { "database": "Ensembl Peptide", "id": "ENSGALP00010035264.1", "url": "https://www.ensembl.org/id/ENSGALP00010035264.1" } ] } }, { "isoform_ac": "A0A8V0ZPA9-1", "url": "https://www.uniprot.org/uniprotkb/A0A1D5P882/entry#A0A8V0ZPA9-1", "sequence": { "sequence": "MQGSARRTLLEDRGRVAQRRAFMTRKIRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGEAAPALHLNKGTPSQSPVVGRSQGQQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHTAQNSANAGFANFDAFGQSSGSSNFGGFPTASQSSFQPQNTGGSAGSVNANFAHFDNFPKSSSADFGAFNASQSNATVTGASKAAVNKPGLQSADKYAALANLDNIFSAGQGGSEQGSGFSTVVSASAGPALSAPNQSSASSDKYAALAELDSVFSSTATSSNAYTSTSNVSSNAFGTVPVAATSQTQPASSSVPASFGATPSTNPFVAAPVAPVAPSTNPFQTNSRGATAATFGTASMSMPAGFGTPASYSLPTSFSGNFQQPTFPTQAAFPQQTAFAQQPNGAGFAAFGQAKPVVTPFGQVAAVGVSSNPFMAGAPTGQFPAGNSSTNPFL", "length": 535, "header": "tr|A0A8V0ZPA9-1|A0A8V0ZPA9_CHICK Computationally mapped isoform of ArfGAP with FG repeats 1 OS=Gallus gallus OX=9031 GN=AGFG1 PE=1 SV=1 CANONICAL=A0A1D5P882-1" }, "locus": { "chromosome": "9", "start_pos": 9176642, "end_pos": 9142518, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSGALT00010058079.1", "url": "https://www.ensembl.org/id/ENSGALT00010058079.1" }, { "database": "Ensembl Peptide", "id": "ENSGALP00010035257.1", "url": "https://www.ensembl.org/id/ENSGALP00010035257.1" } ] } }, { "isoform_ac": "A0A8V0ZPC1-1", "url": "https://www.uniprot.org/uniprotkb/A0A1D5P882/entry#A0A8V0ZPC1-1", "sequence": { "sequence": "MAASAKRKQEEKHLKLLREMSSLPPNRKCFDCDQRGPTYTDMTVGSFVCTSCSGILRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGEAAPALHLNKGTPSQSPVVGRSQGQQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHTAQNSANAGFANFDAFGQSSGSSNFGGFPTASQSSFQPQNTAFRTLSSSCSFGEFTSAFPLQAVHSGSAGSVNANFAHFDNFPKSSSADFGAFNASQSNATVTGASKAAVNKPGLQSADKYAALANLDNIFSAGQGGSEQGSGFSTVVSASAGPALSAPNQSSASSDKYAALAELDSVFSSTATSSNAYTSTSNVSSNAFGTVPVAATSQTQPASSSVPASFGATPSTNPFVAAPVAPVAPSTNPFQTNSRGATAATFGTASMSMPAGFGTPASYSLPTSFSGNFQQPTFPTQAAFPQQTAFAQQPNGAGFAAFGQAKPVVTPFGQVAAVGVSSNPFMAGAPTGQFPAGNSSTNPFL", "length": 588, "header": "tr|A0A8V0ZPC1-1|A0A1D5P882_CHICK Computationally mapped isoform of ArfGAP with FG repeats 1 OS=Gallus gallus OX=9031 GN=AGFG1 PE=1 SV=1 CANONICAL=A0A1D5P882-1" }, "locus": { "chromosome": "9", "start_pos": 9176642, "end_pos": 9141916, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSGALT00010058089.1", "url": "https://www.ensembl.org/id/ENSGALT00010058089.1" }, { "database": "Ensembl Peptide", "id": "ENSGALP00010035267.1", "url": "https://www.ensembl.org/id/ENSGALP00010035267.1" } ] } }, { "isoform_ac": "A0A8V0ZUI5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1D5P882/entry#A0A8V0ZUI5-1", "sequence": { "sequence": "MLQCWITRRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGEAAPALHLNKGTPSQSPVVGRSQGQQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHTGGSAGSVNANFAHFDNFPKSSSADFGAFNASQSNATVTGASKAAVNKPGLQSADKYAALANLDNIFSAGQGGSEQGSGFSTVVSASAGPALSAPNQSSASSDKYAALAELDSVFSSTATSSNAYTSTSNVSSNAFGTVPVAATSQTQPASSSVPASFGATPSTNPFVAAPVAPVAPSTNPFQTNSRGATGLSGAMHSHIFPHAHFAATFGTASMSMPAGFGTPASYSLPTSFSGNFQQPTFPTQAAFPQQTAFAQQPNGAGFAAFGQAKPVVTPFGQVAAVGVSSNPFMAGAPTGQFPAGNSSTNPFL", "length": 492, "header": "tr|A0A8V0ZUI5-1|A0A8V0ZUI5_CHICK Computationally mapped isoform of ArfGAP with FG repeats 1 OS=Gallus gallus OX=9031 GN=AGFG1 PE=1 SV=1 CANONICAL=A0A1D5P882-1" }, "locus": { "chromosome": "9", "start_pos": 9176642, "end_pos": 9142649, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSGALT00010058075.1", "url": "https://www.ensembl.org/id/ENSGALT00010058075.1" }, { "database": "Ensembl Peptide", "id": "ENSGALP00010035253.1", "url": "https://www.ensembl.org/id/ENSGALP00010035253.1" } ] } }, { "isoform_ac": "A0A8V0ZY62-1", "url": "https://www.uniprot.org/uniprotkb/A0A1D5P882/entry#A0A8V0ZY62-1", "sequence": { "sequence": "MAASAKRKQEEKHLKLLREMSSLPPNRKCFDCDQRGPTYTDMTVGSFVCTSCSGILRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGEAAPALHLNKGTPSQSPVVGRSQGQQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHTAQNSANAGFANFDAFGQSSGSSNFGGFPTASQSSFQPQNTGGSAGSVNANFAHFDNFPKSSSADFGAFNASQSNATVTGASKAAVNKPGLQSADKYAALANLDNIFSAGQGGSEQGSGFSTVVSASAGPALSAPNQSSASSDKYAALAELDSVFSSTATSSNAYTSTSNVSSNAFGTVPVAATSQTQPASSSVPASFGATFGTASMSMPAGFGTPASYSLPTSFSGNFQQPTFPTQAAFPQQTAFAQQPNGAGFAAFGQAKPVVTPFGQVAAVGVSSNPFMAGAPTGQFPAGNSSTNPFL", "length": 532, "header": "tr|A0A8V0ZY62-1|A0A1D5P882_CHICK Computationally mapped isoform of ArfGAP with FG repeats 1 OS=Gallus gallus OX=9031 GN=AGFG1 PE=1 SV=1 CANONICAL=A0A1D5P882-1" }, "locus": { "chromosome": "9", "start_pos": 9176642, "end_pos": 9141916, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSGALT00010058082.1", "url": "https://www.ensembl.org/id/ENSGALT00010058082.1" }, { "database": "Ensembl Peptide", "id": "ENSGALP00010035260.1", "url": "https://www.ensembl.org/id/ENSGALP00010035260.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool": "isoglyp", "mining_tool": "", "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "start_pos": 456, "start_aa": "T", "end_pos": 456, "end_aa": "T", "residue": "Thr", "site_lbl": "Thr456", "evidence": [ { "id": "GLY_001161", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001161" } ], "filter_code": "00000000000000001000.00000000001000.1.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [], "pathway": [ { "id": "gga:424793", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?gga:424793", "resource": "KEGG Pathway" }, { "id": "R-GGA-8856825", "name": "Cargo recognition for clathrin-mediated endocytosis", "url": "https://www.reactome.org/PathwayBrowser/#R-GGA-8856825", "resource": "Reactome", "description": "Cargo recognition for clathrin-mediated endocytosis" }, { "id": "R-GGA-8856828", "name": "Clathrin-mediated endocytosis", "url": "https://www.reactome.org/PathwayBrowser/#R-GGA-8856828", "resource": "Reactome", "description": "Clathrin-mediated endocytosis" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A287APA8-1", "protein_name": "ArfGAP with FG repeats 1", "gene_name": "AGFG1", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAASAKRKQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGDSAPALHLNKGTPTQSPVVGRSQGQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSANADFANFDAFGQSSGSSNFGGFPTASHSSFQPQTTGGSAGSVNANFAHFDNFPKSSSADFGTFNTSQSHQTASAVSKVSANKAGVQTTDKYAALANLDNIFSAGQGGDQGSGFGATGKAPVGSVVSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVGASAQTQPASSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMPAGFGTPAPYSLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFAAFGQTKPVVTPFGQVAAAGVSSNPFMTGAPTGQFPTGSSSTNPFL", "length": 562 }, "evidence": [ { "id": "A0A1D5P882", "url": "https://omabrowser.org/oma/group/A0A1D5P882/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A452DJ27-1", "protein_name": "ArfGAP with FG repeats 1", "gene_name": "AGFG1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRFACKCGRSNSSRPAEGASRHLASGRPGRASSCRPRFLVFSPQEKSGRRRRRLSHDRRAGSRGPSALAPQRVRLALSPVESSRSGPGPAQAARADGGRRPRPGRPVGPQGPRRSAARLPALPASSLGAAAMAASAKRKQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGDSAPALHLNKGTPSQSPVVGRSQAQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSANADFANFDAFGQSSGSSNFGGFPTASHSSFQPQTTGGSAGSVNANFAHFDNFPKSSSADFGTFNTSQSHQTASAVSKVSANKAGLQTTDKYAALANLDNIFSAGQGGDQGSGFGTTGKAPVGSVVSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVGASAQTQPASSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMPAGFGTPAPYSLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFAAFGQTKPVVTPFGQVGAAGVSSNPFMTGAPTGQFPTGSSSTNPFL", "length": 693 }, "evidence": [ { "id": "A0A1D5P882", "url": "https://omabrowser.org/oma/group/A0A1D5P882/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8I6AVV4-1", "protein_name": "Arf-GAP domain-containing protein", "gene_name": "AABR07054262.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAASARRKQEKHLKMLQGMTGLPHNRKCFDCDQRGPTYMNMTVGSFVCTSCSGSLRGLSPPHRVKSISMTTFTQQKIEFLQKHGNEVCKQIWLGLFDDRSSSIPDFRDLQKVKDSTSSTLEVKPLKSLLGESAPALHLNKGTPSQSPVAGCSQGQQQEKKQLDLLSDLGSDTFAAPAPQLTATANFANFAHFNSHAAARSVNANFAHFDIFPKSSSADFGSFSTSQSHQTASTVSKVSTNKAGLRTADKYAALANLDNIFSAGQGGDRGSGFGTTLVCHSSASSDKYAALAELDSVFSSAATSSNAYTPTGDPSSSVFGTVPVGASAQTQPASSGPAPFGATPSTNPFVAATGPSAASSTNPFQTSARGATAATFGTATVSMPAGFGTPAQYSLPTSFSGSFQQPPFPAQAAFPQQTAFSQQPNGAGFTTFGQTKPVVTPFGQVAAAGVSSNPFMTGAPTGQFPTGSSSTNPFLQPYIE", "length": 479 }, "evidence": [ { "id": "A0A1D5P882", "url": "https://omabrowser.org/oma/group/A0A1D5P882/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P52594-1", "protein_name": "Arf-GAP domain and FG repeat-containing protein 1", "gene_name": "AGFG1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAASAKRKQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGDSAPTLHLNKGTPSQSPVVGRSQGQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSANADFANFDAFGQSSGSSNFGGFPTASHSPFQPQTTGGSAASVNANFAHFDNFPKSSSADFGTFNTSQSHQTASAVSKVSTNKAGLQTADKYAALANLDNIFSAGQGGDQGSGFGTTGKAPVGSVVSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQPASSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMPTGFGTPAPYSLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFAAFGQTKPVVTPFGQVAAAGVSSNPFMTGAPTGQFPTGSSSTNPFL", "length": 562 }, "evidence": [ { "id": "A0A1D5P882", "url": "https://omabrowser.org/oma/group/A0A1D5P882/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8K2K6-4", "protein_name": "Arf-GAP domain and FG repeat-containing protein 1", "gene_name": "Agfg1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAASAKRKQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGESAPALHLNKGTPSQSPVVGRSQGQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSANADFANFDAFGQSSGSSNFGGFPTASHSSFQPQTTGGSAGSVNANFAHFDNFPKSSSADFGTFSTSQSHQTASTVSKVSTNKAGLQTADKYAALANLDNIFSAGQGGDQGSGFGTTGKAPVGSVVSVPSHSSASSDKYAALAELDSVFSSAATSSNAYTPTSNASSSVFGTVPVGASAQTQPASSGPAPFGATPSTNPFVAATGPSAASSTNPFQTNARGATAATFGTASMSMPAGFGTPAQYSLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFATFGQTKPVVTPFGQVAAAGVSSNPFMTGAPTGQLPTGSSSTNPFL", "length": 561 }, "evidence": [ { "id": "A0A1D5P882", "url": "https://omabrowser.org/oma/group/A0A1D5P882/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "A0A1D5P882", "url": "https://www.uniprot.org/uniprot/A0A1D5P882" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A1D5P882", "url": "https://www.uniprot.org/uniprot/A0A1D5P882" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1D5P882", "url": "https://www.uniprot.org/uniprot/A0A1D5P882" } ], "pmid": "" }, { "name": "cytoplasmic vesicle", "id": "GO:0031410", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031410", "evidence": [ { "database": "UniProtKB", "id": "A0A1D5P882", "url": "https://www.uniprot.org/uniprot/A0A1D5P882" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "acrosome assembly", "id": "GO:0001675", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001675", "evidence": [ { "database": "UniProtKB", "id": "A0A1D5P882", "url": "https://www.uniprot.org/uniprot/A0A1D5P882" } ], "pmid": "" }, { "name": "spermatid nucleus differentiation", "id": "GO:0007289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007289", "evidence": [ { "database": "UniProtKB", "id": "A0A1D5P882", "url": "https://www.uniprot.org/uniprot/A0A1D5P882" } ], "pmid": "" }, { "name": "intermediate filament organization", "id": "GO:0045109", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045109", "evidence": [ { "database": "UniProtKB", "id": "A0A1D5P882", "url": "https://www.uniprot.org/uniprot/A0A1D5P882" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 325, "end_pos": 327, "annotation": "n_glycosylation_sequon" }, { "start_pos": 330, "end_pos": 332, "annotation": "n_glycosylation_sequon" }, { "start_pos": 391, "end_pos": 393, "annotation": "n_glycosylation_sequon" }, { "start_pos": 425, "end_pos": 427, "annotation": "n_glycosylation_sequon" }, { "start_pos": 597, "end_pos": 599, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A1D5P882-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 604, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A1D5P882-F1.pdb" } ], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 456 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 325, "end_pos": 327 }, { "start_pos": 330, "end_pos": 332 }, { "start_pos": 391, "end_pos": 393 }, { "start_pos": 425, "end_pos": 427 }, { "start_pos": 597, "end_pos": 599 } ] }, "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 1 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "prediction_tool", "mining_tool", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 1 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "prediction_tool", "mining_tool", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] } ] }