{ "uniprot_canonical_ac": "A0A140LJC7-1", "uniprot_ac": "A0A140LJC7", "uniprot_id": "A0A140LJC7_MOUSE", "mass": { "chemical_mass": 231588.0, "monoisotopic_mass": 231588.0 }, "refseq": { "ac": "XP_006509298", "name": "uncharacterized protein LOC100502846 precursor", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_006509298" }, "gene_names": [ { "name": "Gm19410", "resource": "UniProtKB", "type": "recommended", "url": "https://www.uniprot.org/uniprot/A0A140LJC7", "id": "A0A140LJC7" }, { "name": "Gm19410", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_006509298", "id": "XP_006509298" } ], "protein_names": [ { "name": "Predicted gene, 19410", "resource": "UniProtKB", "type": "synonym", "url": "https://www.uniprot.org/uniprotkb/A0A140LJC7/entry#names_and_taxonomy", "id": "A0A140LJC7" }, { "name": "uncharacterized protein LOC100502846 precursor", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_006509298", "id": "XP_006509298" } ], "function": [], "disease": [], "snv": [ { "evidence": [ { "id": "rs30423397", "database": "dbSNP", "url": "https://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=rs30423397" } ], "glycoeffect": [ "n-glyco-sequon-loss", "o-glyco-site-loss" ], "start_pos": 907, "end_pos": 907, "sequence_org": "S", "sequence_mut": "F", "comment": "Germline mutation passed 1 out of 1 filters: n-glyco-sequon-loss (NCS->NCF).", "chr_id": "8", "chr_pos": "36262784", "ref_nt": "T", "alt_nt": "null", "minor_allelic_frequency": "", "site_lbl": "S907", "keywords": [ "ebi", "germline" ] } ], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "A0A140LJC7", "url": "https://www.uniprot.org/uniprot/A0A140LJC7" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "gene": [ { "name": "Gm19410", "url": "https://www.uniprot.org/uniprot/A0A140LJC7", "locus": { "chromosome": "8", "start_pos": 36285201, "end_pos": 36232944, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSMUSG00000109372", "url": "https://www.ensembl.org/id/ENSMUSG00000109372" } ] } } ], "crossref": [ { "id": "A0A140LJC7", "url": "https://alphafold.ebi.ac.uk/entry/A0A140LJC7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSMUSG00000109372", "url": "https://bgee.org/?page=gene&gene_id=ENSMUSG00000109372", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00054", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00054", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd00112", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00112", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000033", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000033", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000152", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000152", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000742", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000742", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001881", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001881", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002172", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002172", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009030", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009030", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011042", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011042", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018097", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018097", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023415", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023415", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026823", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026823", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036055", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036055", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049883", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049883", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051221", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051221", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "5011595", "url": "http://www.informatics.jax.org/marker/MGI:5011595", "database": "MGI", "categories": [ "Organism-specific" ] }, { "id": "ECLTMAH", "url": "https://omabrowser.org/oma/group/ECLTMAH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR22722", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22722", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22722:SF14", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22722:SF14", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00057", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00057", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "PF00058", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00058", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "PF07645", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07645", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "PF12662", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12662", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "XP_006509298", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_006509298", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A140LJC7", "url": "https://www.uniprot.org/uniprot/A0A140LJC7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A140LJC7-1", "url": "https://www.uniprot.org/uniprot/A0A140LJC7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRCRMFLLPFSLMLVSLSGSFGRSGAGELECNRTRQVACGEKCIPVAWLCNGEQECPDGTDELCEQTCLGHLQAWQCDNGRCIPASWLCDGASDCLDGSDEVNCESLTACPDYKIRCPGKAQCLDAGEPCDAQQSCEDGSIKAYCPHIRCLAGQWQCQNRACIMDSWRCDGIDHCGDASDERDCASCPEGTVSCDSGKCIPESLMCNGRADCTDGADEPRTCGKNCSLLNGGCEGPCSDTHWGVRCSCTPGWQLQPDGWSCGDVDECSLPYGPCGQLCHNTPGSYSCGCIQGHQLYNGTDCRVTDDDVKILIATDKELRILDRRTGSHEMLIPVKSRPSSVAYDLDRNMYFWVDKVLNVFVFGKPNSVHLYPELPPVSSISLDWVTGQLYWASSSGRVICAGLSDGRGYVKILEKDLVPEELVVFPAKRYLYWVDRSENGVKTIETAGMDGSDRKMLAVVTAEEPLGLTLDHVTGRLYWISGYKESIETVNVDSSGRYTFPRVFFEDEHPVGLAVFENAFFWANQTQLIRTSPSSPKEREVLLHASISAFSVLHKTQQPKSRHSACVPGSCSHLCLLSPIHPKGYKCVCPEGLFLLPSGTCSELKVVFSSGKRLYLLKVSSMGRAIERTLIEEHAGNLYLLDIDWKRNFIYWANAQGHLVYSAGYSGEKQEIWTQQTVCSANVDIPTGNLFWVPCNRGTIQKTRMPGAESFTLYSTQNIILQLLLDWPRRMLYWVESGTPLQRMTLDGKNRQEVWRGTWAADTRMALDLGSASILWTTKGVGLHSLSILKNRTCSLNTSWSDVVMVAHAPYLVTADKAALVLWNRKTLEPFSTLKEPHIKKMIILAENQEVSDPGLKEPVPTTPSLPPVLCARSSVPCQDGKGCIPRESLCNGEADCQDGSDEKNCSQICHQPGVFQCLDGSRCIEERYHCDGAQHCSDGSDELDCWRPADDCSMHCDNKTRCIPKSWRCDGKPDCLDRRDEQGCFHEKCSSPEFQCENGQCISSSLRCDGDRDCLDHSDEEGCPVAWSLQCPEGEMKCPKSGECVLAEWICDHDVDCKDGTDEKDCGLKVISCGPRQWACDSGDQCVPDFWHCDGQSDCRDGSDEAGCAPQKCQDSEFQCATGACLSFSMVCDGREDCVDGSDEGGECSSSVCSPGLCYHSCYQSPTGPVCVCAPGFELESNGQICQDVNECQQPSGQPCSQTCINTEGSYICACHPGYLLGPDGHTCKATGAEPILLVSIEFNLFLSGLRSLKEDILTTADKNLAIYSVDYDLVDQKIFWADPNAESIRWTSMATKKDGIVVQGIKPDCIGVDWIGRNLYWTDGRAGQILAIQLTAMGRGKSEYTVVLDDDLIRPQSLALDPLNGLMYWSETGEEPRIEQAGMDGSSRKILVNQGLGHPTSIALDQLSWKIFWSDEKFHCIGSVNLDGSGISMMQLTQIKSPFSVAVFEDKVFWSDLQTRTIQHAEKMTGKDRAVLIKRSGQPFGLKIMHEVLQPRSSSPCLDIGCSHLCLLSPRAKGSCRCPVGLLLADDGITCVSLQESGFVFLVLPTVLTQIYLKNLKTSQQTTVPEHRILPFTSVKQLASVDYLVQEKALYLSELNTSDIRLLRMKEPGILSWRRVISVKGTVIDFALDWMSGNIYWIDTDNPYINVAFSNGQYPIVLLSENLYRPTSIVLHPPTAAMCLADLGSQDDGRHGSSIECASMDGSGRKVLWLQSQVPVGLAFSDSGTRVYWADTGQGLIQSIQLDGSRYRVDHQGLKGLHLFACGQDMMLWTTVDDAQITRVWYNKAQVSESQWFQVDQKIVDLKVYSVLSQQGNNSCSRDNGGCSHICLPNPEGKTCWCPNGYCLVDGHTCVEAVQCSPMSQCCKDGQRCISKEQICDGHVDCLDGSDEVDCLNPGNVHSTSILKKPEARKRLISEAFKLFQATESTTNVYLGEEEMRHPVRKTLTSQMPASGSKVPETKGRAETRQSKDLQTATHMSCSQDFCNGRGTCIMEGKLRKCRCLVEYGGEFCQEAARGPVSGYVALGGAVALSAALAIWGLFLHSRRERKFKRTSSRNLDYDKENNQEEENLMKSETFVNEVYDDQESLTSLQTE", "length": 2098, "header": "tr|A0A140LJC7-1|A0A140LJC7_MOUSE Isoform 1 of Predicted gene, 19410 OS=Mus musculus OX=10090 GN=Gm19410 PE=3 SV=1 CANONICAL=A0A140LJC7-1" }, "isoforms": [ { "isoform_ac": "A0A140LJC7-1", "url": "https://www.uniprot.org/uniprotkb/A0A140LJC7/entry#A0A140LJC7-1", "sequence": { "sequence": "MRCRMFLLPFSLMLVSLSGSFGRSGAGELECNRTRQVACGEKCIPVAWLCNGEQECPDGTDELCEQTCLGHLQAWQCDNGRCIPASWLCDGASDCLDGSDEVNCESLTACPDYKIRCPGKAQCLDAGEPCDAQQSCEDGSIKAYCPHIRCLAGQWQCQNRACIMDSWRCDGIDHCGDASDERDCASCPEGTVSCDSGKCIPESLMCNGRADCTDGADEPRTCGKNCSLLNGGCEGPCSDTHWGVRCSCTPGWQLQPDGWSCGDVDECSLPYGPCGQLCHNTPGSYSCGCIQGHQLYNGTDCRVTDDDVKILIATDKELRILDRRTGSHEMLIPVKSRPSSVAYDLDRNMYFWVDKVLNVFVFGKPNSVHLYPELPPVSSISLDWVTGQLYWASSSGRVICAGLSDGRGYVKILEKDLVPEELVVFPAKRYLYWVDRSENGVKTIETAGMDGSDRKMLAVVTAEEPLGLTLDHVTGRLYWISGYKESIETVNVDSSGRYTFPRVFFEDEHPVGLAVFENAFFWANQTQLIRTSPSSPKEREVLLHASISAFSVLHKTQQPKSRHSACVPGSCSHLCLLSPIHPKGYKCVCPEGLFLLPSGTCSELKVVFSSGKRLYLLKVSSMGRAIERTLIEEHAGNLYLLDIDWKRNFIYWANAQGHLVYSAGYSGEKQEIWTQQTVCSANVDIPTGNLFWVPCNRGTIQKTRMPGAESFTLYSTQNIILQLLLDWPRRMLYWVESGTPLQRMTLDGKNRQEVWRGTWAADTRMALDLGSASILWTTKGVGLHSLSILKNRTCSLNTSWSDVVMVAHAPYLVTADKAALVLWNRKTLEPFSTLKEPHIKKMIILAENQEVSDPGLKEPVPTTPSLPPVLCARSSVPCQDGKGCIPRESLCNGEADCQDGSDEKNCSQICHQPGVFQCLDGSRCIEERYHCDGAQHCSDGSDELDCWRPADDCSMHCDNKTRCIPKSWRCDGKPDCLDRRDEQGCFHEKCSSPEFQCENGQCISSSLRCDGDRDCLDHSDEEGCPVAWSLQCPEGEMKCPKSGECVLAEWICDHDVDCKDGTDEKDCGLKVISCGPRQWACDSGDQCVPDFWHCDGQSDCRDGSDEAGCAPQKCQDSEFQCATGACLSFSMVCDGREDCVDGSDEGGECSSSVCSPGLCYHSCYQSPTGPVCVCAPGFELESNGQICQDVNECQQPSGQPCSQTCINTEGSYICACHPGYLLGPDGHTCKATGAEPILLVSIEFNLFLSGLRSLKEDILTTADKNLAIYSVDYDLVDQKIFWADPNAESIRWTSMATKKDGIVVQGIKPDCIGVDWIGRNLYWTDGRAGQILAIQLTAMGRGKSEYTVVLDDDLIRPQSLALDPLNGLMYWSETGEEPRIEQAGMDGSSRKILVNQGLGHPTSIALDQLSWKIFWSDEKFHCIGSVNLDGSGISMMQLTQIKSPFSVAVFEDKVFWSDLQTRTIQHAEKMTGKDRAVLIKRSGQPFGLKIMHEVLQPRSSSPCLDIGCSHLCLLSPRAKGSCRCPVGLLLADDGITCVSLQESGFVFLVLPTVLTQIYLKNLKTSQQTTVPEHRILPFTSVKQLASVDYLVQEKALYLSELNTSDIRLLRMKEPGILSWRRVISVKGTVIDFALDWMSGNIYWIDTDNPYINVAFSNGQYPIVLLSENLYRPTSIVLHPPTAAMCLADLGSQDDGRHGSSIECASMDGSGRKVLWLQSQVPVGLAFSDSGTRVYWADTGQGLIQSIQLDGSRYRVDHQGLKGLHLFACGQDMMLWTTVDDAQITRVWYNKAQVSESQWFQVDQKIVDLKVYSVLSQQGNNSCSRDNGGCSHICLPNPEGKTCWCPNGYCLVDGHTCVEAVQCSPMSQCCKDGQRCISKEQICDGHVDCLDGSDEVDCLNPGNVHSTSILKKPEARKRLISEAFKLFQATESTTNVYLGEEEMRHPVRKTLTSQMPASGSKVPETKGRAETRQSKDLQTATHMSCSQDFCNGRGTCIMEGKLRKCRCLVEYGGEFCQEAARGPVSGYVALGGAVALSAALAIWGLFLHSRRERKFKRTSSRNLDYDKENNQEEENLMKSETFVNEVYDDQESLTSLQTE", "length": 2098, "header": "tr|A0A140LJC7-1|A0A140LJC7_MOUSE Isoform 1 of Predicted gene, 19410 OS=Mus musculus OX=10090 GN=Gm19410 PE=3 SV=1 CANONICAL=A0A140LJC7-1" }, "locus": { "chromosome": "8", "start_pos": 36285143, "end_pos": 36232944, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSMUST00000207505.2", "url": "https://www.ensembl.org/id/ENSMUST00000207505.2" }, { "database": "Ensembl Peptide", "id": "ENSMUSP00000147162.2", "url": "https://www.ensembl.org/id/ENSMUSP00000147162.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "G97155IS", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "ALYLSELNTSDIR", "relation": "attached", "comment": "", "start_pos": 1602, "start_aa": "N", "end_pos": 1602, "end_aa": "N", "residue": "Asn", "site_lbl": "Asn1602", "evidence": [ { "id": "10.1101/2023.09.13.557529", "database": "DOI", "url": "https://glygen.org/publication/DOI/10.1101/2023.09.13.557529" }, { "id": "GLY_000889", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000889" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0001000.1100010000.00000000110000.00100.01000" }, { "glytoucan_ac": "G35029YA", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "IVDLKVYSVLSQQGNNSCSR", "relation": "attached", "comment": "", "start_pos": 1819, "start_aa": "N", "end_pos": 1819, "end_aa": "N", "residue": "Asn", "site_lbl": "Asn1819", "evidence": [ { "id": "10.1101/2023.09.13.557529", "database": "DOI", "url": "https://glygen.org/publication/DOI/10.1101/2023.09.13.557529" }, { "id": "GLY_000889", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000889" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1100000000.01010001111110.00010.01000" }, { "glytoucan_ac": "G80920RR", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "SGAGELECNR", "relation": "attached", "comment": "", "start_pos": 32, "start_aa": "N", "end_pos": 32, "end_aa": "N", "residue": "Asn", "site_lbl": "Asn32", "evidence": [ { "id": "10.1101/2023.09.13.557529", "database": "DOI", "url": "https://glygen.org/publication/DOI/10.1101/2023.09.13.557529" }, { "id": "GLY_000889", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000889" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1100000000.10010101111111.00010.01000" }, { "glytoucan_ac": "G80920RR", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "TCSLNTSWSDVVMVAHAPYLVTADK", "relation": "attached", "comment": "", "start_pos": 797, "start_aa": "N", "end_pos": 797, "end_aa": "N", "residue": "Asn", "site_lbl": "Asn797", "evidence": [ { "id": "10.1101/2023.09.13.557529", "database": "DOI", "url": "https://glygen.org/publication/DOI/10.1101/2023.09.13.557529" }, { "id": "GLY_000889", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000889" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1100000000.10010101111111.00010.01000" }, { "glytoucan_ac": "G62765YT", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "ESLCNGEADCQDGSDEKNCSQICHQPGVFQCLDGSR", "relation": "attached", "comment": "", "start_pos": 905, "start_aa": "N", "end_pos": 905, "end_aa": "N", "residue": "Asn", "site_lbl": "Asn905", "evidence": [ { "id": "10.1101/2023.09.13.557529", "database": "DOI", "url": "https://glygen.org/publication/DOI/10.1101/2023.09.13.557529" }, { "id": "GLY_000889", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000889" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1100000000.10010101111111.00010.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_reported_with_glycan" ], "publication": [ { "title": "Deep quantitative glycoproteomics reveals gut microbiome induced remodeling of the brain glycoproteome", "journal": "bioRxiv", "date": "2023", "authors": "Potel C.M., Burtscher M.L., Garrido-Rodriguez M., Brauer-Nikonow A., Becher I., Typas A., Zimmermann M., Savitski M.", "evidence": [ { "database": "GlyGen", "id": "GLY_000889", "url": "https://data.glygen.org/GLY_000889" } ], "reference": [ { "type": "DOI", "id": "10.1101/2023.09.13.557529", "url": "https://glygen.org/publication/DOI/10.1101/2023.09.13.557529" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1MFR5-1", "protein_name": "EGF-like domain-containing protein", "gene_name": "LOC527981", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGVQTLLLLLLPVLGGLGGSTTDEMQCHATRQAACGGRCIPVAWLCNGEHECPDEADEQCEEVCRGHPQAWQCDDGRCISSHWLCDGVGDCLDGSDEVNCERRTACPHPKTQCPGDPRCRDAWDPCDVSEDCGGRFGDALCPQHRCLSGQWQCRNGLCIPDSWRCDGVDHCGDSSDEQGCASCPEGMVGCDEGKCILESLMCDGEVDCTDGTDEPVTCGKNCSLANGGCEGQCGDSPWGVRCSCTAGWQLQPDGQSCGDVDECSMAYSPCGQLCHNTRGSYSCGCIQGYQLHNGTDCRVTDDAVKILIAADRELGILDRGTGIYETLIPVKSRPISVAYDLERSMYFWVDEVLNVFVLGKPNPASLYPELKTINSISLDWFTGQLYWASSFARVICAGLSDGRGYIRILEKDLVPEQLIVFPAKKYLYWVNRGGKGLRTIETAGMDGSDRKVLAVVNMEEPTGLTLDHVASRLYWISAYKESIETVNVDGSGRHTFPKVFLEDDDPVGLAVFENSFFWANKLQLFRTSPHTTKEREVLLNASISAFLVLHQSQQPKSKYPAYVPGSCSHLCLLSPVHPKGYKCVCPEGMFLLPSGTCSELKLVFSSGKRLYLLKVGFMGTAIERSLVQEHPRNIYLLDIDWKRNLIYWTDTQGHLFHSTGYLGDKQEIWTEHTVCSANVDIPTGNLYWLPCDRSAIQRTRLAGPDTHILYKTGSVILHLLLDWPRRLLYWVESGEPLKSMTLDGKSIQTVWRGTWTADTHVTLDLGSSSILWTTKGSGLQSLSLLKNRTYTLNETWSDGMIAAHEPYLLTLNRTALVLWNRRKPEPFSVSKEAYVQKMIILAENLEVPDPEVEGAAAPSPPPPPPPPPVLCTRSSVPCRDGLECISRGYLCDGKQDCGDGSDEENCSRFCNRPGVFQCLDGNKCIEEKYHCDGAQQCLDGSDELGCWKPVEDCSLRCDNKTRCIPKSWLCDGHPDCSDGKDEQGCIHEKCSPSEFKCENGQCVSSSLRCDGNRDCLDHSDEEGCPAWPLPCPSGEVKCPRSGECVLAEWICDHDLDCKDGTDEKDCDSRELRCGSRQWRCASGEQCVPEPWRCDGQSDCGDGSDETGCPPEKCGSSEFQCHPSACLDLSLVCDGKRDCADGSDEGGQCSSSACRQGQCFHSCYPSPHGPVCACERGFELKSSGQICEDVDECQRLGGHPCSQTCVNTKGSYTCACHPGYSLEPDGHTCKATGTEPVLLVAIQFKLLLYGMRSLKEDILATTDKNLIIFSIDYDLVDQKVFWTDLGAQSIQWISMDMKKKGTMVKGIKADCIVVDWIGRNLYWTDGTAGQILAIQLTAIWRGKSEYTVVLDNDLNQPRSLALDPLNGLMYWSEIGGEPQIEQAGMDGSSRKILLSQGLGWPTSIVLDQLSWKIFWSDDKFHCIGSANLDGTGISMLQLTQIKSPFSVAVFEDEVFWSEMKTRTVQRMKKMTGKNRAVLIKRLEQPYGLKVMHEVLQPRSSNPCLDAECSHLCLLSPQSKGSCRCPAGLLLADDGVNCVPLKESAFLFLGLPTVIMQIYLKNLDASRGQATLPGHRILPFTNVNQLASMDYVTQEKVLYLTEWNTGDIWLLRLKDSGKLSWRKIISVEGTVTDLAVDWLSGNIYWIGSENAHINIASPRGQYSTVLLSGSLYRPTCVVLHPPTAVMCFVDLGPQDDGRRGSSIECASMDGSRRKVLWRKPQVPVGLSFSDAGTRLYWADPGRGLIESIQQDGSRYRVDRRGIQGLNLFTYGQGMMFWTTVDDAQISKVWYSKAELSENRWFQVDQKIVDLKVYSKLSQQGSNHCSKDNGGCSHICLPKPEGQTCKCPSGYYLDDIKKCLEAVRCSAPSQSCKDGQKCISATQVCDGHADCLDGSDEMDCTYPDTTHSTPTPKTSESGKRLTPKAVQPLQGTKSTKTRSPGPEGMNYPVRKILTPPIPAPESETPETKEGGQPKDSHREKLLLCSSDFCSGRGICTMQGELRKCNCLMGYSGDFCEAAAHGPAPGHIALSLTIALLVVLVILGAFVYFRREHKLKRNRTASSRNLTCHKENDQEEENLMNSETFVNEAYDEQELLTSLQTD", "length": 2098 }, "evidence": [ { "id": "A0A140LJC7", "url": "https://omabrowser.org/oma/group/A0A140LJC7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8I6GL13-1", "protein_name": "Prolow-density lipoprotein receptor-related protein 1-like", "gene_name": "Lrpl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRCRMLLLLFSLVLVFWGGSVGRSGAGELECNRTRQVACGEKCIPIAWLCNGEQECPDGSDEQCEQTCLGHAQAWQCDNGKCIPASWLCDGASDCVDGSDELNCESLTVCPDYKIYCPGKALCLDAGEHCDAHQNCEDGSLKAHCPHARCLPGQWQCRNRACVMDSWRCDGIDHCGDASDEQGCASCPEGTVSCDGGKCIPESLMCDGRSDCMDGADEPETCGKNCSLLNGGCEGPCSDTHWGVRCSCTPGWRLQPDGQRCEDVDECSLAYGPCGQLCHNTAGSYSCGCIQGHQLYNGTDCRVTDDDVKILIATDKELGILDRRTGIHEKLTPVKSRPSSVAYDLNRNMYFWVDKVLNVFVFGKPNSVPLYPELPPVSSISLDWVTGQLYWASSSARVICAGLSDGRGYVKILEKDLVPEEIVVFPAKRYLYWVDRGKNGVKTIEAAGMDGSDRKMLAVVTTEEPLGLTLDHVTGRLYWISGYKESIETVNVDGHGRHTFPRVFFQDEDPVGLAVFENAFFWANQTQLIRASPRSPKEREVLLQASISAFLVLHKTQQPKSRHSACVPGSCSHLCLLSPIHPKGYKCVCPEGLFLLPSGTCSELKVVFSSGKRLYLLKVSSMGRAIERTLVEEHAGNLYLLDIDWKRNFIYWSNAQGHLVYSSGYSGEKQEIWTQQTVCSANVDIATGNLFWVPCDRGTIHKTSMPGAESYILYSTRNIILQLLLDWPRRALYWVESGKPLQSMTLDGKNRQEVWRGTWAADTRMALDLGSASILCTTKGLGLHSLSLLKNRTRSLNTSWSDVLLVAHAPYLVTADKATLVLWNRKTLEPFSTMKETHIKKMIILVENQEVSDSPVPDPGHKEPVPTAPSLPPVLCARSSVPCQDGKGCIPRESLCNGEDDCQDGSDEKNCFRVCHQPGVFQCLDGSGCIEERYHCDGAEHCSDGSDELGCWRPADDCSLRCDNKTRCIPKSWRCDGKPDCLDRRDEQGCLHEKCSSTEFQCESGQCVSSSLHCDGNRDCLDHSDEEGCPVSWSLQCPEGEMKCPKSGECVLAEWICDHDVDCEDGADEKDCGLKVISCGPRQWACGSGDQCVPDFWHCDGQSDCRDGSDEAGCAPQRCQDSEFQCATTGACLSFSMVCDGREDCADGSDEGGECSSSMCSPELCYHSCYQSPTGSVCACAPGFELESNGQICRDVNECQQPSGQPCSQTCINTEGSYICACHPGYLLGSDGHTCKATGAEPILLVSIEFNLFLYGLRSLKEDILATVDKNRVIYSVDYDLVDQKIFWAGPNAESIRWTSMATKKDGMVVQGIKPDCIGVDWIGRNLYWTDGRAGQILAIQLTAVGKGKPEYTVVLDDDLIQPQSLALDPLNGLMYWSEIGEEPRIEQAGMDGNSRKILVNQGLGRPTSIALDQLSWKIFWSDEKFHCIGSVNLDGSGIRMMQLTQIQSPFSVAVFEDKVFWSDLQTRTIQSVEKMTGKDRAVLIKRSGQPFGLKIMHEVLQPRSSSPCLDIGCSHLCLLSPQAKGSCRCPVGLLLADDGITCVSLQESGFVFLVLPTVLTQIYLRNLKTTPSQTTVPEHRTLPFTSVKQLASVDYLVQEKALYLSELNTSDIRLLRLRERGILSWQRVISVRGTVIDFALDWMSGNIYWIDTENPYINVAFSNGQYPIVLLSENLYRPSSIVLHPPTAVMCLADLGLQDAGRHGSSIECASMDGSQRKVLWLKSPVPVGLALSDSGTRVYWADTGQGLIQSIQLDGSRYRVDHQGLKGLHLFACGQDMMLWTTVDDAQITRVWYNKAQVSENQWFQVDQKIVDLKVYSVLSQRGNNSCSKDNGGCSHICLPNPEGRTCRCPRGYCLVEGHTCVEAVQCPPTLQCCKDGQRCISKEQICNGHVDCLDGSDEVDCLNPGELHSTSILKKPEAWKRLIPEAFELSQATESTTDVYLGREEMRHPVKTTLTTQMPASESKVPETKGRAETVQSKDLRTATHRPCSQDFCNGNGICIMEGKLRKCRCLVEYGGEFCQEAARGPATGYIALGGVIAVSATLAVLGLFLHSRRERKFKRTSSKNLDYDKENNQEEENLMKSETFVNEVYDEQESLTSLQTE", "length": 2105 }, "evidence": [ { "id": "A0A140LJC7", "url": "https://omabrowser.org/oma/group/A0A140LJC7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0XJE6-1", "protein_name": "EGF-like domain-containing protein", "gene_name": "LOC430303", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGRPPPLRLLLAILILRSAAGAEARRAPPTSPTCAASRQAACGDVCIPISWLCDGEQQCPDGTDELCDAPCGGDPHVWQCDDGRCVASSWRCDGAADCPDGSDEQDCVCGAKKLQCPGTHHCIPHWELCDRHQDCADGWDEEGCPLQPCLPGQWQCRNRVCIVAEWKCNGVDDCGDSSDEDICAPCPPGMVRCDEGKCILESLMCNDEDDCLDGTDEPSTCGRSCFVRNGGCAESCTDTHWGVQCSCGSGWVLQADGQSCADVDECSLEYSPCSQLCRNTPGTFSCACLEGYLLRHGTFCEVADNATQLLVAVGEDLALLDVRTQTYRPVLSTEAELRALVYDLLRETYYWLTEEGELCAHLPGKGVQLLYADAGEVNSISVDWFTGQLYWASSHPAAICAGLGDGRGYVTVLGKDVVPEQLTVYPSARSLYWVNRGLRGRTVIAAAGMDGSNRQELTVVSMEEPVGLSLDYVAGRLYWISEYKESIETLRVDGSGRHSFPAVLRSHTEPLGLAVFESRFFWADGTELVSASQASPQEHAVLLRAPVSAFTVLHALQQPPRDTAACAPGLCSHLCLLSPVHPRGYRCACPEGLYLQPSGKCTELSIVYSSRTAISLLQVGPGTHSKQVQEWQEAFHLQDVDWKRSVLYGTDDSGALLRVVGHPGKRETIVTGLPVCSARVDIRSGNLYWLACNRRDIGVTKVSDLTPRILHRARSSIQHLFLDWQRGALYWLARGQPLQQLSLAGGSPWDAWNETWPGELPAAMDSKAFSLLWSSALGLRALSLTKQQAVTLAPSWSHGLVAAFEPYLISVNETALLLWDRRTLTLVLSVPATGVQGVVAFVGSELQEVPVPLPVPASKGPALPLPPPVTTTTRTTTATSAQPTTSTTQLPLSKTTAAPTTPATTTKSTTTLTTTSLSATTTTASAPTTTWTTSNKTTTVQVATTSTATTRSLPTKPAVPQLSTSTQPPTTPALAVPPTPLFGPSPPHPPTRFSHLSCPRTHMPCRDGAECVAQEYVCDGEKDCADGSDEDECAQLCDAPGAFHCASSTTCVEANERCDGVPQCPDASDEMGCWSPTQDCALRCDAATRCVPESWLCDGHADCLDHTDEQGCVPKKCSASEFPCRSGQCVALALRCDGDPDCRDGSDEEGCAVPRPLLCRPGEVACSHSGECVPEAWRCDGVADCRDSTDEQGCPLEDQQCGERQWGCSHGHECIPDAWRCDRESDCSDGSDEAGCHPTPCLSHEYPCGLGICLNASLVCSGQQDCADGSDEGGNCSLPCQRPCSQLCYPSPQGPRCWCTPGYQLAEDGMSCVDVDECTEQGKRTCSQICLNAPGTYSCGCLSGYLLEPDGHICKLSGPEPMLLVAVQSEVLSYGLRSGREEVLLTSDKERTIFSLDYDLVERKVFWMDLATESISWQSLDSRKKGTLVKGVRSDCIAVDWIGRNLYWTDGVAGQVLATSLETTWRGKPEYTMVLDGDLDQPHSLVLQPLAGMLYWSEVGNQPRLMEATMDGRRQRVLLAQGLGWPTALALDLPTSRLFWLDEKLGSVGSTHLDGTDVKVLQLRWVQSPFAAAVCEGQLYWSERKAWSVQQVDKATGKNRTVLLKRHGQPHGLQVMHPALRLAAPNPCTARGCSHLCLLSSRHAGQCRCPIGMTLADDETTCLPLHTSAFALLVSPAAVMQVYLKDMPPTAGAQGLPQHRALPLAKVGRLTAVDYMVKDKSLYFAEVGSDSIGLLRLKDSGRLSWKKVVAVEGMVVSLALDWLSGNLYWIEGQPTSIHVATAGGRWALVLLSEGLQGAAWLALCPRASTMCFITAAGSRRPGAAVECAAMDGSGRRVVWSRARSPAGLTFGGASTRLYWADQERGAIGSVELDGSHFRLVREGLHGLRLFAIGDGFLLWSTTTTNGSSKVWHSRLEQAKSWWFLMEQELVALRIYSQFSQEGTNGCTKNNGGCAQLCLPNPAGRQCRCSPGYHLVRGVTCAPVPPCPALLRACADLQSCISAQQVCDGHPDCTDGSDELGCTFEEAKTQVPVVSSSRTSRAEEEKPTVPSAAPQQPSPSLPAAPGPRQHGEPFLATPDTEEVLGAMPCSSETCNLRGECAIEAGRVMCHCALGYRGDYCEEAEVQPLAGPIALGVAVLLLLAAAAVGALAYMRKRDRRRRTSSTASTRVLTLYHRESDPEEEDEEEEELPPKSDTFVNEAYDGKEELPTRLGKGPSRPNTVLP", "length": 2223 }, "evidence": [ { "id": "A0A140LJC7", "url": "https://omabrowser.org/oma/group/A0A140LJC7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "P98163-1", "protein_name": "Vitellogenin receptor Yl", "gene_name": "yl", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MCQAEHQVHPSEQRIRVESPKMTASRRGFNLTSQTRAHPSSGGSTSSRYGNCQRTHLIINGRHVAISLLLLVGLCGGTAAGTPGSADTRCDAGQFQCRDGGCILQAKMCDGRGDCKDSSDELDCDYRLCRPPHWFPCAQPHGACLAAELMCNGIDNCPGGEDELNCPVRPGFRFGDTAHRMRSCSKYEFMCQQDRTCIPIDFMCDGRPDCTDKSDEVAGCKQAEITCPGEGHLCANGRCLRRKQWVCDGVDDCGDGSDERGCLNLCEPQKGKFLCRNRETCLTLSEVCDGHSDCSDGSDETDLCHSKPDCDAKKCALGAKCHMMPASGAECFCPKGFRLAKFEDKCEDVDECKEQDDLCSQGCENTSGGYRCVCDAGYLLDKDNRTCRAVVYGSKEQQPLLLYTTQMTIMGMHLREDNVRNHVYQVAGNLSKVIGVAYDGSHIYWTNIQNEAESIVKANGDGSNAEILLTSGLDAPEDLAVDWLTQNIYFSDNIMRHIAVCSNDGLNCAVLVTQDVHQPRSLAVWPQKGLMFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDGMLKHPYGLAIFEDQLYWSDWATKSVHACHKFSGKDHRILAKDRTIYAVHIYHPAKQPNSPHGCENATCSHLCLLAEPEIGGHSCACPDGMRLAPDHRRCMLMEKRQRLFIGLGQVLLEIEHTAFGRHQVSKSYTLPCLINEMVYNRINGSLIIADNDQRLILEFQPESHESNVLVRSNLGNVSALAFDHLSRNLYWADTERAVIEVLSLQTRHRALIRFFPGQEVPIGLTVMPAEGYLYVVLKAKRHSHIDKIPLSGKGEQVHVFEDDLGDDDIKLVTDYETQTIFWSDSDLGRISYSNYRVPHSQIFRGKLRRPYSLAMVHHDLFWNELGTPRIYWTHKSNMGPRKVIDIMEKDDPAAIMPYVPVATPNGIPLAASSPVGQESHPCQQQNGGCSHICVGEGPYHSICLCPAGFVYRDAGNRTCVEALDCEFRCHSGECLTMNHRCNGRRDCVDNSDEMNCDEEHRRKPKVLCSPNQFACHSGEQCVDKERRCDNRKDCHDHSDEQHCEKFDKSKKCHVHQHGCDNGKCVDSSLVCDGTNDCGDNSDELLCEATSRCEPGMFQCGSGSCIAGSWECDGRIDCSDGSDEHDKCVHRSCPPDMQRCLLGQCLDRSLVCDGHNDCGDKSDELNCGTDSSTMNISCAEDQYQCTSNLKICLPSTVRCNGTTECPRGEDEADCGDVCSIYEFKCRSGRECIRREFRCDGQKDCGDGSDELSCELEKGHHNQSQIQPWSTSSRSCRPHLFDCQDGECVDLSRVCNNFPDCTNGHDEGPKCATACRSASGRQVCQHKCRATPAGAVCSCFDGYRLDADQKSCLDIDECQEQQPCAQLCENTLGGYQCQCHADFMLRQDRVSCKSLQSGATLLFSSFNEVRNLSEQPVMLNVAWSANDSRITGFDLAMHRQMGYFSAEDEGIVYQIDLQTKVIVRALGLPAPTKLSVDWVTGNVYVLSGAQEIQACSFVGRMCGRIVHVKSPRHVKHLAVDGYHARIFYIVIRTEGYGQTSSEIHMARLDGSRRDMLLQRSESFMTALTTDPHQQLLYFVDQHMRTLERISYRLKTGPMRRPEIMLQKSNALMHPSGLSVYENNAFIVNLGSVEAVQCALYGSRICHKISINVLNAQDIVVAGRSRQPQKASHPCAHAHCHGLCLQADYGYECMCGNRLVAEGERCPHGSGNEVAVLGAVNSLELEHEHEQNGHFHWLMALFVLAAGSLIAGLGYMYYQYRQRGHTDLNINMHFQNPLATLGGTKAFLEHERAEAGVGFTTETGTVSSRGSNDTFTTTSATSSFAAQQFSVPNALQRLLRPRQSASGDPMAQELLLESPSRESKLHALDGGGAGGDGDGGRGVGRQVPDILVADMDDDAAKSAGQFGGNYAGNDANARFVS", "length": 1984 }, "evidence": [ { "id": "A0A140LJC7", "url": "https://omabrowser.org/oma/group/A0A140LJC7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A140LJC7", "url": "https://www.uniprot.org/uniprot/A0A140LJC7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "endocytosis", "id": "GO:0006897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006897", "evidence": [ { "database": "UniProtKB", "id": "A0A140LJC7", "url": "https://www.uniprot.org/uniprot/A0A140LJC7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "A0A140LJC7", "url": "https://www.uniprot.org/uniprot/A0A140LJC7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1602, "end_pos": 1604, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1819, "end_pos": 1821, "annotation": "n_glycosylation_sequon" }, { "start_pos": 225, "end_pos": 227, "annotation": "n_glycosylation_sequon" }, { "start_pos": 297, "end_pos": 299, "annotation": "n_glycosylation_sequon" }, { "start_pos": 32, "end_pos": 34, "annotation": "n_glycosylation_sequon" }, { "start_pos": 524, "end_pos": 526, "annotation": "n_glycosylation_sequon" }, { "start_pos": 791, "end_pos": 793, "annotation": "n_glycosylation_sequon" }, { "start_pos": 797, "end_pos": 799, "annotation": "n_glycosylation_sequon" }, { "start_pos": 905, "end_pos": 907, "annotation": "n_glycosylation_sequon" }, { "start_pos": 959, "end_pos": 961, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A140LJC7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 2098, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A140LJC7-F1.pdb" } ], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [ 32, 797, 905, 1602, 1819 ], "o_linked_sites": [], "snv_sites": [ 907 ], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1602, "end_pos": 1604 }, { "start_pos": 1819, "end_pos": 1821 }, { "start_pos": 225, "end_pos": 227 }, { "start_pos": 297, "end_pos": 299 }, { "start_pos": 32, "end_pos": 34 }, { "start_pos": 524, "end_pos": 526 }, { "start_pos": 791, "end_pos": 793 }, { "start_pos": 797, "end_pos": 799 }, { "start_pos": 905, "end_pos": 907 }, { "start_pos": 959, "end_pos": 961 } ] }, "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 5 }, { "field": "total_sites", "count": 5 }, { "field": "n_linked_glycans", "count": 4 }, { "field": "n_linked_glycan_sites", "count": 5 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "prediction_tool", "mining_tool", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 5 }, { "field": "total_sites", "count": 5 }, { "field": "n_linked_glycans", "count": 4 }, { "field": "n_linked_glycan_sites", "count": 5 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "prediction_tool", "mining_tool", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "sequence_org", "sequence_mut", "comment", "chr_id", "chr_pos", "ref_nt", "alt_nt", "minor_allelic_frequency", "site_lbl" ] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "sequence_org", "sequence_mut", "comment", "chr_id", "chr_pos", "ref_nt", "alt_nt", "minor_allelic_frequency", "site_lbl" ] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }