{ "title": "Oligosaccharide analysis and molecular modeling of soluble forms of glycoproteins belonging to the Ly-6, scavenger receptor, and immunoglobulin superfamilies expressed in Chinese hamster ovary cells.", "journal": "Glycobiology", "date": "1999", "authors": "Rudd PM, Wormald MR, Harvey DJ, Devasahayam M, McAlister MS, Brown MH, Davis SJ, Barclay AN, Dwek RA", "reference": { "type": "PubMed", "id": "10207177", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, "referenced_glycans": [ { "glytoucan_ac": "G90093AU" }, { "glytoucan_ac": "G77149EE" }, { "glytoucan_ac": "G06110VR" }, { "glytoucan_ac": "G07483YN" }, { "glytoucan_ac": "G40124HY" }, { "glytoucan_ac": "G44413JJ" }, { "glytoucan_ac": "G29011JC" }, { "glytoucan_ac": "G50757KG" }, { "glytoucan_ac": "G36134VO" }, { "glytoucan_ac": "G90717TP" }, { "glytoucan_ac": "G22768VO" }, { "glytoucan_ac": "G00670OT" }, { "glytoucan_ac": "G79568CQ" }, { "glytoucan_ac": "G90426CG" }, { "glytoucan_ac": "G80218BM" }, { "glytoucan_ac": "G70894RY" }, { "glytoucan_ac": "G87618BG" }, { "glytoucan_ac": "G31544HA" }, { "glytoucan_ac": "G46687AB" }, { "glytoucan_ac": "G72735IY" }, { "glytoucan_ac": "G78059CC" }, { "glytoucan_ac": "G88673AA" }, { "glytoucan_ac": "G23432EQ" }, { "glytoucan_ac": "G80858MF" }, { "glytoucan_ac": "G14669DU" }, { "glytoucan_ac": "G23863VK" }, { "glytoucan_ac": "G70375MX" }, { "glytoucan_ac": "G14882EB" }, { "glytoucan_ac": "G00176HZ" }, { "glytoucan_ac": "G51519NL" }, { "glytoucan_ac": "G27919IH" }, { "glytoucan_ac": "G52064IJ" }, { "glytoucan_ac": "G61207RZ" }, { "glytoucan_ac": "G60145BJ" }, { "glytoucan_ac": "G93141AZ" }, { "glytoucan_ac": "G86357DX" }, { "glytoucan_ac": "G41405QQ" }, { "glytoucan_ac": "G55220VL" }, { "glytoucan_ac": "G49874UX" }, { "glytoucan_ac": "G71919QK" }, { "glytoucan_ac": "G63889NK" }, { "glytoucan_ac": "G85737WG" }, { "glytoucan_ac": "G31936TA" }, { "glytoucan_ac": "G16389EC" }, { "glytoucan_ac": "G72797UR" }, { "glytoucan_ac": "G50045TK" }, { "glytoucan_ac": "G74724QE" }, { "glytoucan_ac": "G36191CD" }, { "glytoucan_ac": "G39188ZX" }, { "glytoucan_ac": "G16828VN" }, { "glytoucan_ac": "G81295CK" }, { "glytoucan_ac": "G75727PF" }, { "glytoucan_ac": "G61505ZR" }, { "glytoucan_ac": "G01079KY" }, { "glytoucan_ac": "G08520NM" }, { "glytoucan_ac": "G63640QH" }, { "glytoucan_ac": "G93993PD" }, { "glytoucan_ac": "G80966KZ" }, { "glytoucan_ac": "G94854LT" }, { "glytoucan_ac": "G05724UK" }, { "glytoucan_ac": "G33609NS" }, { "glytoucan_ac": "G64527OM" }, { "glytoucan_ac": "G82348BZ" }, { "glytoucan_ac": "G39213VZ" }, { "glytoucan_ac": "G89098OM" }, { "glytoucan_ac": "G58667NI" } ], "referenced_proteins": [ { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06127-1", "protein_name": "T-cell surface glycoprotein CD5", "gene_name": "CD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10252-1", "protein_name": "CD48 antigen", "gene_name": "Cd48", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P05540-1", "protein_name": "T-cell surface glycoprotein CD4", "gene_name": "Cd4", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P06729-1", "protein_name": "T-cell surface antigen CD2", "gene_name": "CD2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P13987", "url": "https://www.uniprot.org/uniprot/P13987" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "glycosylation": [ { "glytoucan_ac": "G00176HZ", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1110000000.01010000100100.00000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G07483YN", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: Asn43 ; Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1110000000.00000000110100.00000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G08520NM", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1100000000.01010000100100.00000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G14882EB", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0010000.1110000000.00000000100000.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G16828VN", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1100000000.01010000100100.00000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G22768VO", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: Asn43 ; Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "00100000000000000000.0000000.00010000000000.1000000.1100000000.01010000111110.00000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G27919IH", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: Asn43 ; Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1110000000.01010000111100.00000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G36134VO", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: Asn43 ; Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0010000.1110000000.00000000100100.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G36191CD", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1100000000.01010000111100.00000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G39213VZ", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1100000000.01010000111100.00000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G40124HY", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: Asn43 ; Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0010000.1110000000.00010000100100.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G41405QQ", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: Asn43 ; Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0001000.1110000000.00000000100000.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G44413JJ", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1110000000.01010000111100.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G55220VL", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1100000000.11010000111100.00000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G58667NI", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1110000000.01000000111100.00000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G61207RZ", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: Asn43 ; Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1110000000.01010000100100.00000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G61505ZR", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0010000.1110000000.00000000101000.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G63640QH", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1100000000.01000000110000.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G63889NK", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: Asn43 ; Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0010000.1110000000.00000000111100.00000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G71919QK", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0010000.1110000000.00000000100000.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G77149EE", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0010000.1110000000.00000000101100.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G78059CC", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1110000000.01010000111100.00000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G80858MF", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1110000000.01010000111100.00000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G80966KZ", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: Asn43 ; Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "00100000000000000000.1000000.00010000000000.0100000.1100000000.01010000111110.00000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G82348BZ", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1110000000.01010000111100.00000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G85737WG", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1100000000.01010000110100.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G86357DX", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0010000.1110000000.01000000111100.00000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G87618BG", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1100000000.01010000111100.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G90717TP", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1110000000.01000000100100.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G93141AZ", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: Asn43 ; Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1110000000.00000000101100.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G93993PD", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: Asn43 ; Asn43", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1100000000.11010000111101.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "", "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "P13987", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/P13987#ptm_processing" }, { "id": "18780401", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/18780401" }, { "id": "8670172", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/8670172" }, { "id": "1CDR", "database": "RCSB PDB", "url": "https://www.rcsb.org/sequence/1CDR" }, { "id": "1CDS", "database": "RCSB PDB", "url": "https://www.rcsb.org/sequence/1CDS" }, { "id": "24190977", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/24190977" }, { "id": "GLY_000143", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000143" }, { "id": "23090970", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/23090970" } ], "filter_code": "00100000000000000000.00010000000000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G01079KY", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "", "relation": "attached", "comment": "", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "79", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/79" } ], "filter_code": "00000000000000000000.0000000.00010000000000.0001000.1110000000.00000000100000.00001.01000", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G16389EC", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "", "relation": "attached", "comment": "", "evidence": [ { "id": "10207177", "database": "PubMed", "url": 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