{ "title": "N-glycan structures of matrix metalloproteinase-1 derived from human fibroblasts and from HT-1080 fibrosarcoma cells.", "journal": "European journal of biochemistry", "date": "1999", "authors": "Saarinen J, Welgus HG, Flizar CA, Kalkkinen N, Helin J", "reference": { "type": "PubMed", "id": "10092871", "url": "https://pubmed.ncbi.nlm.nih.gov/10092871" }, "referenced_glycans": [ { "glytoucan_ac": "G85542KD" }, { "glytoucan_ac": "G70418MS" }, { "glytoucan_ac": "G44444MB" }, { "glytoucan_ac": "G72667IM" }, { "glytoucan_ac": "G50757KG" }, { "glytoucan_ac": "G85196QC" }, { "glytoucan_ac": "G52880ZN" }, { "glytoucan_ac": "G56284ZY" }, { "glytoucan_ac": "G44215PV" }, { "glytoucan_ac": "G84452RH" }, { "glytoucan_ac": "G31736BK" }, { "glytoucan_ac": "G64706DG" }, { "glytoucan_ac": "G78059CC" }, { "glytoucan_ac": "G23863VK" }, { "glytoucan_ac": "G38349VC" }, { "glytoucan_ac": "G48381WH" }, { "glytoucan_ac": "G93856AJ" }, { "glytoucan_ac": "G36221RT" }, { "glytoucan_ac": "G15198VK" }, { "glytoucan_ac": "G63381RX" }, { "glytoucan_ac": "G76136FD" }, { "glytoucan_ac": "G95977AE" }, { "glytoucan_ac": "G17689DH" }, { "glytoucan_ac": "G76012OT" }, { "glytoucan_ac": "G22310AV" }, { "glytoucan_ac": "G25451PN" }, { "glytoucan_ac": "G50045TK" }, { "glytoucan_ac": "G08110WX" }, { "glytoucan_ac": "G36191CD" }, { "glytoucan_ac": "G02240AO" }, { "glytoucan_ac": "G00051MO" }, { "glytoucan_ac": "G03382KH" }, { "glytoucan_ac": "G58268WC" }, { "glytoucan_ac": "G82592ZH" }, { "glytoucan_ac": "G02628JF" }, { "glytoucan_ac": "G47871MN" }, { "glytoucan_ac": "G75983OB" } ], "referenced_proteins": [ { "uniprot_canonical_ac": "P03956-1", "protein_name": "Interstitial collagenase", "gene_name": "MMP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P03956", "url": "https://www.uniprot.org/uniprot/P03956" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "glycosylation": [ { "glytoucan_ac": "G02628JF", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "", "start_pos": 120, "start_aa": "Asn", "end_pos": 120, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn120", "evidence": [ { "id": "10092871", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10092871" }, { "id": "301", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/301" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0010000.1110100000.00000000100010.00100.01000", "uniprot_canonical_ac": "P03956-1" }, { "glytoucan_ac": "G03382KH", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "", "start_pos": 120, "start_aa": "Asn", "end_pos": 120, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn120", "evidence": [ { "id": "10092871", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10092871" }, { "id": "301", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/301" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1110000000.01010000111110.00010.01000", "uniprot_canonical_ac": "P03956-1" }, { "glytoucan_ac": "G08110WX", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "", "start_pos": 120, "start_aa": "Asn", "end_pos": 120, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn120", "evidence": [ { "id": "10092871", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10092871" }, { "id": "301", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/301" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0010000.1110100000.00000000111010.00100.01000", "uniprot_canonical_ac": "P03956-1" }, { "glytoucan_ac": "G15198VK", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: ASN-120 ; ASN-120", "start_pos": 120, "start_aa": "Asn", "end_pos": 120, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn120", "evidence": [ { "id": "10092871", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10092871" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "301", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/301" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1110000000.00000000100000.00001.01000", "uniprot_canonical_ac": "P03956-1" }, { "glytoucan_ac": "G23863VK", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "", "start_pos": 120, "start_aa": "Asn", "end_pos": 120, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn120", "evidence": [ { "id": "10092871", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10092871" }, { "id": "301", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/301" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1110000000.01010000111110.00010.01000", "uniprot_canonical_ac": "P03956-1" }, { "glytoucan_ac": "G25451PN", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "", "start_pos": 120, "start_aa": "Asn", "end_pos": 120, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn120", "evidence": [ { "id": "10092871", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10092871" }, { "id": "301", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/301" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0010000.1110000000.00010000110110.00010.01000", "uniprot_canonical_ac": "P03956-1" }, { "glytoucan_ac": "G36221RT", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: ASN-120 ; ASN-120", "start_pos": 120, "start_aa": "Asn", "end_pos": 120, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn120", "evidence": [ { "id": "10092871", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10092871" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "301", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/301" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0010000.1110000000.00000000100000.00001.01000", "uniprot_canonical_ac": "P03956-1" }, { "glytoucan_ac": "G38349VC", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: ASN-120 ; ASN-120", "start_pos": 120, "start_aa": "Asn", "end_pos": 120, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn120", "evidence": [ { "id": "10092871", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10092871" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "301", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/301" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0010000.1110100000.00000000101000.00001.01000", "uniprot_canonical_ac": "P03956-1" }, { "glytoucan_ac": "G44215PV", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "", "start_pos": 120, "start_aa": "Asn", "end_pos": 120, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn120", "evidence": [ { "id": "10092871", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10092871" }, { "id": "301", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/301" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1110000000.01010000110110.00010.01000", "uniprot_canonical_ac": "P03956-1" }, { "glytoucan_ac": "G48381WH", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "ASN-120", "start_pos": 120, "start_aa": "Asn", "end_pos": 120, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn120", "evidence": [ { "id": "10092871", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10092871" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "301", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/301" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1110000000.01000000101000.00001.01000", "uniprot_canonical_ac": "P03956-1" }, { "glytoucan_ac": "G50757KG", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "", "start_pos": 120, "start_aa": "Asn", "end_pos": 120, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn120", "evidence": [ { "id": "10092871", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10092871" }, { "id": "301", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/301" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0100000.1110000000.01010000111110.00010.01000", "uniprot_canonical_ac": "P03956-1" }, { "glytoucan_ac": "G52880ZN", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "ASN-120", "start_pos": 120, "start_aa": "Asn", "end_pos": 120, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn120", "evidence": [ { "id": "10092871", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10092871" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "301", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/301" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0010000.1110000000.00000000100100.00000.01000", "uniprot_canonical_ac": "P03956-1" }, { "glytoucan_ac": "G56284ZY", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "", "start_pos": 120, "start_aa": "Asn", "end_pos": 120, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn120", "evidence": [ { "id": "10092871", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10092871" }, { "id": "301", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/301" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0010000.1110000000.00000000100010.00010.01000", "uniprot_canonical_ac": "P03956-1" }, { "glytoucan_ac": "G58268WC", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "ASN-120", "start_pos": 120, "start_aa": "Asn", "end_pos": 120, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn120", "evidence": [ { "id": "10092871", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10092871" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "301", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/301" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0010000.1110100000.00000000100000.00001.01000", "uniprot_canonical_ac": "P03956-1" }, { "glytoucan_ac": "G63381RX", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "", "start_pos": 120, "start_aa": "Asn", "end_pos": 120, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn120", "evidence": [ { "id": "10092871", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10092871" }, { "id": "301", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/301" } ], "filter_code": "00100000000000000000.0000000.00010000000000.0010000.1110000000.00000000100000.00010.01000", "uniprot_canonical_ac": "P03956-1" }, { "glytoucan_ac": "G64706DG", "type": "N-linked", "subtype": "other", "prediction_tool": "", "mining_tool": "", "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. 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