{ "uniprot_canonical_ac": "O60512-1", "uniprot_ac": "O60512", "uniprot_id": "B4GT3_HUMAN", "mass": { "chemical_mass": 43928.0, "monoisotopic_mass": 43928.0 }, "refseq": { "ac": "NP_001186802", "name": "beta-1,4-galactosyltransferase 3", "summary": "This gene is one of seven beta-1,4-galactosyltransferase (beta4GalT) genes. They encode type II membrane-bound glycoproteins that appear to have exclusive specificity for the donor substrate UDP-galactose; all transfer galactose in a beta1,4 linkage to similar acceptor sugars: GlcNAc, Glc, and Xyl. Each beta4GalT has a distinct function in the biosynthesis of different glycoconjugates and saccharide structures. As type II membrane proteins, they have an N-terminal hydrophobic signal sequence that directs the protein to the Golgi apparatus and which then remains uncleaved to function as a transmembrane anchor. By sequence similarity, the beta4GalTs form four groups: beta4GalT1 and beta4GalT2, beta4GalT3 and beta4GalT4, beta4GalT5 and beta4GalT6, and beta4GalT7. This gene encodes an enzyme that may be mainly involved in the synthesis of the first N-acetyllactosamine unit of poly-N-acetyllactosamine chains. Multiple alternatively spliced transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Dec 2010].", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186802" }, "gene_names": [ { "name": "B4GALT3", "resource": "UniProtKB", "type": "recommended", "url": "https://www.uniprot.org/uniprot/O60512", "id": "O60512" }, { "name": "B4GALT3", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186802", "id": "NP_001186802" }, { "name": "beta4Gal-T3", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186802", "id": "NP_001186802" } ], "protein_names": [ { "name": "Beta-1,4-galactosyltransferase 3", "resource": "UniProtKB", "type": "recommended", "url": "", "id": "O60512" }, { "name": "2.4.1.-", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "O60512" }, { "name": "2.4.1.275", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "O60512" }, { "name": "2.4.1.38", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "O60512" }, { "name": "2.4.1.90", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "O60512" }, { "name": "Beta-1,4-GalTase 3", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "O60512" }, { "name": "Beta-N-acetylglucosaminyl-glycolipid beta-1,4-galactosyltransferase", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "O60512" }, { "name": "Beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "O60512" }, { "name": "Beta4Gal-T3", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "O60512" }, { "name": "N-acetyllactosamine synthase", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "O60512" }, { "name": "Nal synthase", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "O60512" }, { "name": "Neolactotriaosylceramide beta-1,4-galactosyltransferase", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "O60512" }, { "name": "UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 3", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "O60512" }, { "name": "UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 3", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "O60512" }, { "name": "b4Gal-T3", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "O60512" }, { "name": "beta-1,4-galactosyltransferase 3", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186802", "id": "NP_001186802" }, { "name": "beta-N-acetylglucosaminyl-glycolipid beta-1,4-galactosyltransferase 3; b4Gal-T3; beta-1,4-GalTase 3; epididymis secretory sperm binding protein; nal synthase; N-acetyllactosamine synthase; UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 3; UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 3; UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3; beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase; neolactotriaosylceramide beta-1,4-galactosyltransferase", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186802", "id": "NP_001186802" } ], "function": [ { "annotation": "B4GALT3 promotes cell proliferation and invasion in glioblastoma.", "evidence": [ { "database": "RefSeq", "id": "NP_001186802", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186802" }, { "database": "PubMed", "id": "32202233", "url": "https://glygen.org/publication/PubMed/32202233" } ] }, { "annotation": "B4GALT3, DAP3, RGS16, TMEM183A and UCK2--were significantly overexpressed in dup(1q)-positive ALLs compared with high hyperdiploid ALLs without dup(1q).", "evidence": [ { "database": "RefSeq", "id": "NP_001186802", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186802" }, { "database": "PubMed", "id": "17613536", "url": "https://glygen.org/publication/PubMed/17613536" } ] }, { "annotation": "High-metastatic hepatocellular carcinoma cells secrete exosomal miR-1247-3p that directly targets B4GALT3, leading to activation of beta1-integrin-NF-kappaappaB metastatic signaling in fibroblasts resulting in lung cancer. Publication Status: Online-Only", "evidence": [ { "database": "RefSeq", "id": "NP_001186802", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186802" }, { "database": "PubMed", "id": "29335551", "url": "https://glygen.org/publication/PubMed/29335551" } ] }, { "annotation": "In bladder tumor cells circUBXN7 serves as a competitive endogenous RNA of miR-1247-3p to elevate B4GALT3 expression, consequently inhibiting cell viability and invasion.", "evidence": [ { "database": "RefSeq", "id": "NP_001186802", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186802" }, { "database": "PubMed", "id": "30312173", "url": "https://glygen.org/publication/PubMed/30312173" } ] }, { "annotation": "Long noncoding RNA differentiation antagonizing nonprotein coding RNA promotes the proliferation, invasion and migration of neuroblastoma cells via targeting beta-1, 4-galactosyltransferase III by sponging miR-338-3p.", "evidence": [ { "database": "RefSeq", "id": "NP_001186802", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186802" }, { "database": "PubMed", "id": "34050113", "url": "https://glygen.org/publication/PubMed/34050113" } ] }, { "annotation": "Responsible for the synthesis of complex-type N-linked oligosaccharides in many glycoproteins as well as the carbohydrate moieties of glycolipids.", "evidence": [ { "database": "UniProtKB", "id": "O60512", "url": "https://www.uniprot.org/uniprot/O60512#function" }, { "database": "PubMed", "id": "11588157", "url": "https://glygen.org/publication/PubMed/11588157" }, { "database": "PubMed", "id": "9405390", "url": "https://glygen.org/publication/PubMed/9405390" } ] }, { "annotation": "These findings suggest that the transcription of the b4GalT3 gene is regulated by differential DNA binding of Sp3 and Sp1 in neuroblastoma and lung cancer. The increased expression of b4GalT3 in neuroblastoma may be ascribed to the enhanced expression of Sp3, which is observed for various cancers.", "evidence": [ { "database": "RefSeq", "id": "NP_001186802", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186802" }, { "database": "PubMed", "id": "30561605", "url": "https://glygen.org/publication/PubMed/30561605" } ] }, { "annotation": "This gene is one of seven beta-1,4-galactosyltransferase (beta4GalT) genes. They encode type II membrane-bound glycoproteins that appear to have exclusive specificity for the donor substrate UDP-galactose; all transfer galactose in a beta1,4 linkage to similar acceptor sugars: GlcNAc, Glc, and Xyl. Each beta4GalT has a distinct function in the biosynthesis of different glycoconjugates and saccharide structures. As type II membrane proteins, they have an N-terminal hydrophobic signal sequence that directs the protein to the Golgi apparatus and which then remains uncleaved to function as a transmembrane anchor. By sequence similarity, the beta4GalTs form four groups: beta4GalT1 and beta4GalT2, beta4GalT3 and beta4GalT4, beta4GalT5 and beta4GalT6, and beta4GalT7. This gene encodes an enzyme that may be mainly involved in the synthesis of the first N-acetyllactosamine unit of poly-N-acetyllactosamine chains. Multiple alternatively spliced transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Dec 2010].", "evidence": [ { "database": "RefSeq", "id": "NP_001186802", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186802" } ] } ], "disease": [], "snv": [ { "evidence": [ { "id": "rs756992272", "database": "dbSNP", "url": "https://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=rs756992272" }, { "id": "rs756992272", "database": "ExAC", "url": "https://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=rs756992272" }, { "id": "rs756992272", "database": "gnomAD", "url": "http://gnomad.broadinstitute.org/awesome?query=rs756992272" } ], "glycoeffect": [ "n-glyco-sequon-loss" ], "start_pos": 166, "end_pos": 166, "sequence_org": "N", "sequence_mut": "K", "comment": "Germline mutation passed 1 out of 1 filters: n-glyco-sequon-loss (NGT->KGT).", "chr_id": "1", "chr_pos": "161174041", "ref_nt": "T", "alt_nt": "null", "minor_allelic_frequency": "", "site_lbl": "N166", "keywords": [ "ebi", "germline" ] }, { "evidence": [ { "id": "rs1209617337", "database": "dbSNP", "url": "https://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=rs1209617337" }, { "id": "rs1209617337", "database": "gnomAD", "url": "http://gnomad.broadinstitute.org/awesome?query=rs1209617337" } ], "glycoeffect": [ "n-glyco-sequon-loss" ], "start_pos": 166, "end_pos": 166, "sequence_org": "N", "sequence_mut": "T", "comment": "Germline mutation passed 1 out of 1 filters: n-glyco-sequon-loss (NGT->TGT).", "chr_id": "1", "chr_pos": "161174042", "ref_nt": "G", "alt_nt": "null", "minor_allelic_frequency": "", "site_lbl": "N166", "keywords": [ "ebi", "germline" ] }, { "evidence": [ { "id": "O60512", "database": "BioMuta", "url": "https://hive.biochemistry.gwu.edu/biomuta/proteinview/O60512" } ], "glycoeffect": [], "start_pos": 32, "end_pos": 32, "subjects_tested": "0", "subjects_positive": "0", "frequency": "0.0", "sequence_org": "R", "sequence_mut": "Q", "comment": "Somatic mutation passed 1 out of 6 filters: num. of cancers (3).", "chr_id": "1", "chr_pos": "161175966", "ref_nt": "C", "alt_nt": "T", "minor_allelic_frequency": "", "site_lbl": "R32", "disease": [ { "disease_id": "DOID:363", "recommended_name": { "id": "DOID:363", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:363", "name": "uterine cancer", "description": "A female reproductive organ cancer that is located_in the uterus." }, "synonyms": [ { "id": "DOID:363", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:363", "name": "CA - cancer of uterus", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:363", "name": "Tumour of uterus", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:363", "name": "malignant neoplasm of uterus", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:363", "name": "malignant uterine tumor", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:363", "name": "neoplasm of uterus", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:363", "name": "uterine tumor", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:363", "name": "uterus neoplasm", "description": "" } ] }, { "disease_id": "DOID:1612", "recommended_name": { "id": "DOID:1612", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:1612", "name": "breast cancer", "description": "A thoracic cancer that originates in the mammary gland." }, "synonyms": [ { "id": "DOID:1612", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:1612", "name": "breast tumor", "description": "" }, { "id": "DOID:1612", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:1612", "name": "malignant neoplasm of breast", "description": "" }, { "id": "DOID:1612", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:1612", "name": "malignant tumor of the breast", "description": "" }, { "id": "DOID:1612", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:1612", "name": "mammary cancer", "description": "" }, { "id": "DOID:1612", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:1612", "name": "mammary tumor", "description": "" }, { "id": "DOID:1612", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:1612", "name": "primary breast cancer", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "hereditary breast carcinoma", "description": "Breast carcinoma that has developed in relatives of patients with history of breast carcinoma." }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "breast cancer susceptibility, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "breast cancer, early-onset, susceptibility to, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "breast cancer, invasive ductal, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "breast cancer, lobular, somatic", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "breast cancer, male, susceptibility to, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "breast cancer, protection against, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "breast cancer, somatic", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "breast cancer, susceptibility to, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "familial breast cancer", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "familial breast carcinoma", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "familial cancer of breast", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "familial cancer of the breast", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "hereditary breast cancer", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "hereditary breast carcinoma", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "breast cancer, familial", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "breast cancer, familial Male", "description": "" }, { "id": "MIM:114480", "resource": "MIM", "url": "https://www.omim.org/entry/114480", "name": "Breast cancer", "description": "Breast cancer" } ] }, { "disease_id": "DOID:1324", "recommended_name": { "id": "DOID:1324", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:1324", "name": "lung cancer", "description": "A respiratory system cancer that is located_in the lung." }, "synonyms": [ { "id": "MONDO:0012159", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012159", "name": "lung cancer susceptibility 1", "description": "" }, { "id": "MONDO:0012159", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012159", "name": "LNCR1", "description": "" }, { "id": "MONDO:0012159", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012159", "name": "lung cancer susceptibility", "description": "" }, { "id": "MONDO:0012159", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012159", "name": "lung cancer susceptibility 1", "description": "" }, { "id": "MONDO:0012942", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012942", "name": "lung cancer susceptibility 3", "description": "" }, { "id": "MONDO:0012942", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012942", "name": "LNCR3", "description": "" }, { "id": "MONDO:0012942", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012942", "name": "lung cancer susceptibility 3", "description": "" }, { "id": "MONDO:0012942", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012942", "name": "adenocarcinoma of lung, susceptibility to", "description": "" }, { "id": "MONDO:0012955", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012955", "name": "lung cancer susceptibility 4", "description": "" }, { "id": "MONDO:0012955", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012955", "name": "LNCR4", "description": "" }, { "id": "MONDO:0012955", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012955", "name": "lung cancer susceptibility 4", "description": "" }, { "id": "MONDO:0013631", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013631", "name": "lung cancer susceptibility 5", "description": "" }, { "id": "MONDO:0013631", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013631", "name": "LNCR5", "description": "" }, { "id": "MONDO:0013631", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013631", "name": "lung cancer susceptibility 5", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "lung cancer", "description": "A malignant neoplasm involving the lung." }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "adenocarcinoma of lung, response to tyrosine kinase inhibitor in, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "adenocarcinoma of lung, somatic", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "cancer of lung", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "lung cancer", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "lung cancer, protection against, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "lung cancer, resistance to, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "lung cancer, somatic", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "lung cancer, susceptibility to, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "malignant lung neoplasm", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "malignant lung tumor", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "malignant lung tumour", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "malignant neoplasm of lung", "description": "" }, { "id": "MONDO:0008903", 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Male", "description": "" }, { "id": "MIM:114480", "resource": "MIM", "url": "https://www.omim.org/entry/114480", "name": "Breast cancer", "description": "Breast cancer" } ] } ] }, { "significant": "Yes", "trend": "up", "name": "Thyroid cancer [DO disease name]", "url": "http://disease-ontology.org/term/DOID:1781", "evidence": [ { "database": "BioXpress", "id": "O60512", "url": "https://hive.biochemistry.gwu.edu/bioxpress/transcriptview/O60512" } ], "disease": [ { "disease_id": "DOID:1781", "recommended_name": { "id": "DOID:1781", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:1781", "name": "thyroid cancer", "description": "An endocrine gland cancer located in the thryoid gland located in the neck below the thyroid cartilage." }, "synonyms": [ { "id": "DOID:1781", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:1781", "name": "thyroid gland cancer", "description": "" }, { "id": "DOID:1781", "resource": "Disease Ontology", 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"https://hive.biochemistry.gwu.edu/bioxpress/transcriptview/O60512" } ], "disease": [ { "disease_id": "DOID:263", "recommended_name": { "id": "DOID:263", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:263", "name": "kidney cancer", "description": "A urinary system cancer that is located_in the kidney." }, "synonyms": [ { "id": "DOID:263", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:263", "name": "malignant neoplasm of kidney except pelvis", "description": "" }, { "id": "DOID:263", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:263", "name": "malignant tumour of kidney", "description": "" }, { "id": "DOID:263", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:263", "name": "renal cancer", "description": "" } ] } ] }, { "significant": "Yes", "trend": "up", "name": "Liver cancer [DO disease name]", "url": "http://disease-ontology.org/term/DOID:3571", "evidence": [ { 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"type": "N-linked", "subtype": "", "site_category": "reported_with_glycan", "site_seq": "N", "relation": "attached", "comment": "", "start_pos": 166, "start_aa": "Asn", "end_pos": 166, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn166", "evidence": [ { "id": "1032", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/1032" }, { "id": "29741879", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/29741879" } ] }, { "glytoucan_ac": "G83229XP", "type": "N-linked", "subtype": "", "site_category": "reported_with_glycan", "site_seq": "N", "relation": "attached", "comment": "", "start_pos": 166, "start_aa": "Asn", "end_pos": 166, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn166", "evidence": [ { "id": "1032", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/1032" }, { "id": "29741879", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/29741879" } ] }, { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "site_category": "reported", "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "start_pos": 166, "start_aa": "Asn", "end_pos": 166, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn166", "evidence": [ { "id": "O60512", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/O60512#ptm_processing" }, { "id": "24190977", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/24190977" }, { "id": "GLY_000143", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000143" } ] }, { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "site_category": "reported", "site_seq": "N", "relation": "attached", "comment": "", "start_pos": 170, "start_aa": "Asn", "end_pos": 170, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn170", "evidence": [ { "id": "24190977", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/24190977" }, { "id": "GLY_000143", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000143" } ] }, { "glytoucan_ac": "G20210JR", "type": "N-linked", "subtype": "", "site_category": "reported_with_glycan", "site_seq": "N", "relation": "attached", "comment": "", "start_pos": 337, "start_aa": "Asn", "end_pos": 337, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn337", "evidence": [ { "id": "1032", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/1032" }, { "id": "29741879", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/29741879" } ] }, { "glytoucan_ac": "G23294PN", "type": "N-linked", "subtype": "", "site_category": "reported_with_glycan", "site_seq": "N", "relation": "attached", "comment": "", "start_pos": 337, "start_aa": "Asn", "end_pos": 337, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn337", "evidence": [ { "id": "1032", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/1032" }, { "id": "29741879", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/29741879" } ] }, { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "site_category": "reported", "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "start_pos": 337, "start_aa": "Asn", "end_pos": 337, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn337", "evidence": [ { "id": "O60512", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/O60512#ptm_processing" }, { "id": "24190977", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/24190977" }, { "id": "GLY_000143", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000143" } ] }, { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "site_category": "reported", "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "start_pos": 385, "start_aa": "Asn", "end_pos": 385, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn385", "evidence": [ { "id": "O60512", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/O60512#ptm_processing" }, { "id": "24190977", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/24190977" }, { "id": "GLY_000143", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000143" } ] }, { "glytoucan_ac": "G57321FI", "type": "O-linked", "subtype": "", "site_category": "reported_with_glycan", "site_seq": "GRDQGPTFDYSHPRDVY", "relation": "attached", "comment": "Data provided by GlycoDomainViewer", "start_pos": 39, "start_aa": "Gly", "end_pos": 55, "end_aa": "Tyr", "evidence": [ { "id": "O60512", "database": "UniCarbKB", "url": "" }, { "id": "23584533", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/23584533" }, { "id": "10.1038/emboj.2013.79", "database": "DOI", "url": "https://glygen.org/publication/DOI/10.1038/emboj.2013.79" } ] }, { "glytoucan_ac": "G57321FI", "type": "O-linked", "subtype": "", "site_category": "reported_with_glycan", "site_seq": "DQGPTFDYSHPR", "relation": "attached", 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Acta", "date": "1999", "authors": "Amado M, Almeida R, Schwientek T, Clausen H", "evidence": [ { "database": "UniProtKB", "id": "O60512", "url": "https://www.uniprot.org/uniprot/O60512" } ], "reference": [ { "type": "PubMed", "id": "10580128", "url": "https://glygen.org/publication/PubMed/10580128" } ] }, { "title": "Suppression of tumor growth and metastasis in Mgat5-deficient mice.", "journal": "Nature medicine", "date": "2000", "authors": "Granovsky M, Fata J, Pawling J, Muller WJ, Khokha R, Dennis JW", "evidence": [ { "database": "Reactome", "id": "R-HSA-975577", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-975577" } ], "reference": [ { "type": "PubMed", "id": "10700233", "url": "https://glygen.org/publication/PubMed/10700233" } ] }, { "title": "Differential biosynthesis of polysialic acid on neural cell adhesion molecule (NCAM) and oligosaccharide acceptors by three distinct alpha 2,8-sialyltransferases, ST8Sia IV (PST), ST8Sia II (STX), and ST8Sia III.", "journal": "The 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"2001", "authors": "Shiraishi N, Natsume A, Togayachi A, Endo T, Akashima T, Yamada Y, Imai N, Nakagawa S, Koizumi S, Sekine S, Narimatsu H, Sasaki K", "evidence": [ { "database": "Reactome", "id": "R-HSA-2022854", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-2022854" } ], "reference": [ { "type": "PubMed", "id": "11042166", "url": "https://glygen.org/publication/PubMed/11042166" } ] }, { "title": "Functional expression and genomic structure of human N-acetylglucosamine-6-O-sulfotransferase that transfers sulfate to beta-N-acetylglucosamine at the nonreducing end of an N-acetyllactosamine sequence.", "journal": "Biochimica et biophysica acta", "date": "2000", "authors": "Sakaguchi H, Kitagawa H, Sugahara K", "evidence": [ { "database": "Reactome", "id": "R-HSA-2022854", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-2022854" } ], "reference": [ { "type": "PubMed", "id": "11042394", "url": "https://glygen.org/publication/PubMed/11042394" } ] }, { "title": "Molecular cloning and characterization of UDP-GlcNAc:lactosylceramide beta 1,3-N-acetylglucosaminyltransferase (beta 3Gn-T5), an essential enzyme for the expression of HNK-1 and Lewis X epitopes on glycolipids.", "journal": "The Journal of biological chemistry", "date": "2001", "authors": "Togayachi A, Akashima T, Ookubo R, Kudo T, Nishihara S, Iwasaki H, Natsume A, Mio H, Inokuchi J, Irimura T, Sasaki K, Narimatsu H", "evidence": [ { "database": "Reactome", "id": "R-HSA-2022854", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-2022854" } ], "reference": [ { "type": "PubMed", "id": "11283017", "url": "https://glygen.org/publication/PubMed/11283017" } ] }, { "title": "Achievements and challenges of sialic acid research.", "journal": "Glycoconjugate journal", "date": "2000", "authors": "Schauer R", "evidence": [ { "database": "Reactome", "id": "R-HSA-975577", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-975577" } ], "reference": [ { "type": "PubMed", "id": "11421344", "url": 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N-acetylglucosaminyltransferase V expression in gastric cancer.", "journal": "Pathobiology : journal of immunopathology, molecular and cellular biology", "date": "2008", "authors": "Tian H, Miyoshi E, Kawaguchi N, Shaker M, Ito Y, Taniguchi N, Tsujimoto M, Matsuura N", "evidence": [ { "database": "Reactome", "id": "R-HSA-975577", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-975577" } ], "reference": [ { "type": "PubMed", "id": "18931531", "url": "https://glygen.org/publication/PubMed/18931531" } ] }, { "title": "The role of N-acetylglucosaminyltransferase III and V in the post-transcriptional modifications of E-cadherin.", "journal": "Human molecular genetics", "date": "2009", "authors": "Pinho SS, Reis CA, Paredes J, Magalhaes AM, Ferreira AC, Figueiredo J, Xiaogang W, Carneiro F, Gartner F, Seruca R", "evidence": [ { "database": "Reactome", "id": "R-HSA-975577", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-975577" } ], "reference": [ { "type": "PubMed", "id": "19403558", "url": "https://glygen.org/publication/PubMed/19403558" } ] }, { "title": "MGAT5 alters the severity of multiple sclerosis.", "journal": "Journal of neuroimmunology", "date": "2010", "authors": "Brynedal B, Wojcik J, Esposito F, Debailleul V, Yaouanq J, Martinelli-Boneschi F, Edan G, Comi G, Hillert J, Abderrahim H", "evidence": [ { "database": "Reactome", "id": "R-HSA-975577", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-975577" } ], "reference": [ { "type": "PubMed", "id": "20117844", "url": "https://glygen.org/publication/PubMed/20117844" } ] }, { "title": "Precision mapping of the human O-GalNAc glycoproteome through SimpleCell technology.", "journal": "The EMBO journal", "date": "2013", "authors": "Steentoft C, Vakhrushev SY, Joshi HJ, Kong Y, Vester-Christensen MB, Schjoldager KT, Lavrsen K, Dabelsteen S, Pedersen NB, Marcos-Silva L, Gupta R, Bennett EP, Mandel U, Brunak S, Wandall HH, Levery SB, Clausen H", "evidence": [ { "database": "UniCarbKB", "id": "O60512", "url": "" } ], "reference": [ { "type": "PubMed", "id": "23584533", "url": "https://glygen.org/publication/PubMed/23584533" } ] }, { "title": "N-linked glycosylation enrichment for in-depth cell surface proteomics of diffuse large B-cell lymphoma subtypes.", "journal": "Molecular & cellular proteomics : MCP", "date": "2014", "authors": "Deeb SJ, Cox J, Schmidt-Supprian M, Mann M", "evidence": [ { "database": "GlyGen", "id": "GLY_000143", "url": "https://data.glygen.org/GLY_000143" } ], "reference": [ { "type": "PubMed", "id": "24190977", "url": "https://glygen.org/publication/PubMed/24190977" } ] }, { "title": "Tumor-derived exosomal miR-1247-3p induces cancer-associated fibroblast activation to foster lung metastasis of liver cancer.", "journal": "Nature communications", "date": "2018", "authors": "Fang T, Lv H, Lv G, Li T, Wang C, Han Q, Yu L, Su B, Guo L, Huang S, Cao D, Tang L, Tang S, Wu M, Yang W, Wang H", "evidence": [ { "database": "RefSeq", "id": "NP_001186802", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186802" } ], "reference": [ { "type": "PubMed", "id": "29335551", "url": "https://glygen.org/publication/PubMed/29335551" } ] }, { "title": "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "journal": "Analytical chemistry", "date": "2018", "authors": "Hu Y, Shah P, Clark DJ, Ao M, Zhang H", "evidence": [ { "database": "GlyConnect", "id": "1032", "url": "https://glyconnect.expasy.org/browser/proteins/1032" } ], "reference": [ { "type": "PubMed", "id": "29741879", "url": "https://glygen.org/publication/PubMed/29741879" } ] }, { "title": "Circular RNA circUBXN7 represses cell growth and invasion by sponging miR-1247-3p to enhance B4GALT3 expression in bladder cancer.", "journal": "Aging", "date": "2018", "authors": "Liu H, Chen D, Bi J, Han J, Yang M, Dong W, Lin T, Huang J", "evidence": [ { "database": "RefSeq", "id": "NP_001186802", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186802" } ], "reference": [ { "type": "PubMed", "id": "30312173", "url": "https://glygen.org/publication/PubMed/30312173" } ] }, { "title": "Transcription of human beta4-galactosyltransferase 3 is regulated by differential DNA binding of Sp1/Sp3 in SH-SY5Y human neuroblastoma and A549 human lung cancer cell lines.", "journal": "Glycobiology", "date": "2019", "authors": "Tange R, Tomatsu T, Sato T", "evidence": [ { "database": "RefSeq", "id": "NP_001186802", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186802" } ], "reference": [ { "type": "PubMed", "id": "30561605", "url": "https://glygen.org/publication/PubMed/30561605" } ] }, { "title": "B4GALT3 promotes cell proliferation and invasion in glioblastoma.", "journal": "Neurological research", "date": "2020", "authors": "Wu T, Li Y, Chen B", "evidence": [ { "database": "RefSeq", "id": "NP_001186802", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186802" } ], "reference": [ { "type": "PubMed", "id": "32202233", "url": "https://glygen.org/publication/PubMed/32202233" } ] }, { "title": "Long noncoding RNA differentiation antagonizing nonprotein coding RNA promotes the proliferation, invasion and migration of neuroblastoma cells via targeting beta-1, 4-galactosyltransferase III by sponging miR-338-3p.", "journal": "Neuroreport", "date": "2021", "authors": "Bi C, Shan J, Li M, Zhang Q, Li C, Tong J, Huang Q", "evidence": [ { "database": "RefSeq", "id": "NP_001186802", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186802" } ], "reference": [ { "type": "PubMed", "id": "34050113", "url": "https://glygen.org/publication/PubMed/34050113" } ] }, { "title": "Cloning and expression of human Gal beta 1,3(4)GlcNAc alpha 2,3-sialyltransferase.", "journal": "Biochemical and biophysical research communications", "date": "1993", "authors": "Kitagawa H, Paulson JC", "evidence": [ { "database": "Reactome", "id": "R-HSA-2022854", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-2022854" } ], "reference": [ { "type": "PubMed", "id": "8333853", "url": "https://glygen.org/publication/PubMed/8333853" } ] }, { "title": "Characterization of two glycolipid: alpha 2-3sialyltransferases, SAT-3 (CMP-NeuAc:nLcOse4Cer alpha 2-3sialyltransferase) and SAT-4 (CMP-NeuAc:GgOse4Cer alpha 2-3sialyltransferase), from human colon carcinoma (Colo 205) cell line.", "journal": "Biochemistry", "date": "1996", "authors": "Basu SS, Basu M, Li Z, Basu S", "evidence": [ { "database": "Reactome", "id": "R-HSA-2022854", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-2022854" } ], "reference": [ { "type": "PubMed", "id": "8611500", "url": "https://glygen.org/publication/PubMed/8611500" } ] }, { "title": "Molecular cloning and expression of human Gal beta 1,3GalNAc alpha 2,3-sialytransferase (hST3Gal II).", "journal": "Biochemical and biophysical research communications", "date": "1996", "authors": "Kim YJ, Kim KS, Kim SH, Kim CH, Ko JH, Choe IS, Tsuji S, Lee YC", "evidence": [ { "database": "Reactome", "id": "R-HSA-2022854", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-2022854" } ], "reference": [ { "type": "PubMed", "id": "8920913", "url": "https://glygen.org/publication/PubMed/8920913" } ] }, { "title": "Human STX polysialyltransferase forms the embryonic form of the neural cell adhesion molecule. Tissue-specific expression, neurite outgrowth, and chromosomal localization in comparison with another polysialyltransferase, PST.", "journal": "The Journal of biological chemistry", "date": "1997", "authors": "Angata K, Nakayama J, Fredette B, Chong K, Ranscht B, Fukuda M", "evidence": [ { "database": "Reactome", "id": "R-HSA-975577", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-975577" } ], "reference": [ { "type": "PubMed", "id": "9054414", "url": "https://glygen.org/publication/PubMed/9054414" } ] }, { "title": "A family of human beta4-galactosyltransferases. Cloning and expression of two novel UDP-galactose:beta-n-acetylglucosamine beta1, 4-galactosyltransferases, beta4Gal-T2 and beta4Gal-T3.", "journal": "The Journal of biological chemistry", "date": "1997-12-19", "authors": "Almeida R, Amado M, David L, Levery S B, Holmes E H, Merkx G, van Kessel A G, Rygaard E, Hassan H, Bennett E, Clausen H", "evidence": [ { "database": "UniProtKB", "id": "O60512", "url": "https://www.uniprot.org/uniprot/O60512" } ], "reference": [ { "type": "PubMed", "id": "9405390", "url": "https://glygen.org/publication/PubMed/9405390" } ] }, { "title": "Molecular cloning and characterization of human keratan sulfate Gal-6-sulfotransferase.", "journal": "The Journal of biological chemistry", "date": "1997", "authors": "Fukuta M, Inazawa J, Torii T, Tsuzuki K, Shimada E, Habuchi O", "evidence": [ { "database": "Reactome", "id": "R-HSA-2022854", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-2022854" } ], "reference": [ { "type": "PubMed", "id": "9405439", "url": "https://glygen.org/publication/PubMed/9405439" } ] }, { "title": "Cloning of a human UDP-galactose:2-acetamido-2-deoxy-D-glucose 3beta-galactosyltransferase catalyzing the formation of type 1 chains.", "journal": "The Journal of biological chemistry", "date": "1998", "authors": "Kolbinger F, Streiff MB, Katopodis AG", "evidence": [ { "database": "Reactome", "id": "R-HSA-2022854", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-2022854" } ], "reference": [ { "type": "PubMed", "id": "9417100", "url": "https://glygen.org/publication/PubMed/9417100" } ] }, { "title": "The expanding beta 4-galactosyltransferase gene family: messages from the databanks.", "journal": "Glycobiology", "date": "1998", "authors": "Lo NW, Shaper JH, Pevsner J, Shaper NL", "evidence": [ { "database": "UniProtKB", "id": "O60512", "url": "https://www.uniprot.org/uniprot/O60512" }, { "database": "Reactome", "id": "R-HSA-975577", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-975577" } ], "reference": [ { "type": "PubMed", "id": "9597550", "url": "https://glygen.org/publication/PubMed/9597550" } ] } ], "pathway": [ { "id": "hsa:8703", "name": "", "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+hsa:8703", "resource": "KEGG Pathway" }, { "id": "R-HSA-2022854", "name": "Keratan sulfate biosynthesis", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-2022854", "resource": "Reactome", "description": "Keratan sulfate biosynthesis" }, { "id": "R-HSA-975577", "name": "N-Glycan antennae elongation", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-975577", "resource": "Reactome", "description": "N-Glycan antennae elongation" } ], "orthologs": [ { "uniprot_canonical_ac": "Q6P768-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4galt3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLRRLLERPCTLALLVGSQLAVMMYLSLGGFRSLSALFGRDPGPTFDYSHPHDVYSNLSHLPGAPGAAGAPLAQVLPDCPERSPFLVGPVSVSFSPVPSLAEIVERNPRVESGGRYRPAGCEPRSRTAIIVPHRAREHHLRLLLYHLHPFLQRQQLAYGIYVIHQAGNGTFNRAKLLNVGVREALRDEEWDCLFLHDVDLLPENDHNLYVCDPRGPRHVAVAMNKFGYSLPYPQYFGGVSALTPDQYLKMNGFPNEYWGWGGEDDDIATRVRLAGMKISRPPTSVGHYKMVKHRGDKGNEENPHRFDLLVRTQNSWTQDGMNSLTYRLLARELGPLYTNITADIGTDPRGPRAPSGPRYPPGSSQAFRQEMLQRRPPARPGPLPTANHTAPHGSH", "length": 395 }, "evidence": [ { "id": "45923811", "url": "http://www.informatics.jax.org/homology/45923811", "database": "MGI" }, { "id": "O60512", "url": "https://omabrowser.org/oma/group/O60512/", "database": "OMA" } ], "common_name": "Rat" }, { "uniprot_canonical_ac": "Q91YY2-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4galt3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLRRLLERPCTLALLVGSQLAVMMYLSLGGFRSLSALFGRDPGPTFDYSHPHDVYSNLSHLPAAPGAAGAPPAQALPYCPERSPFLVGPVSVSFSPVPSLAEIVERNPRVESGGRYRPAGCEPRSRTAIIVPHRAREHHLRLLLYHLHPFLQRQQLAYGIYVIHQAGNGTFNRAKLLNVGVREALRDEEWDCLFLHDVDLLPENDHNLYVCDPRGPRHVAVAMNKFGYSLPYPQYFGGVSALTPDQYLKMNGFPNEYWGWGGEDDDIATRVRLAGMKISRPPTSVGHYKMVKHRGDKGNEENPHRFDLLVRTQNSWTQDGMNSLTYRLLARELGPLYTNITADIGTDPRGPRSPSGPRYPPGSSQAFRQEMLQRRPPARPGPLPTANHTAPRGSH", "length": 395 }, "evidence": [ { "id": "45923811", "url": "http://www.informatics.jax.org/homology/45923811", "database": "MGI" }, { "id": "O60512", "url": "https://omabrowser.org/oma/group/O60512/", "database": "OMA" } ], "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "O60512", "url": "https://www.uniprot.org/uniprot/O60512" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "O60512", "url": "https://www.uniprot.org/uniprot/O60512" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "O60512", "url": "https://www.uniprot.org/uniprot/O60512" } ], "pmid": "" }, { "name": "extracellular exosome", "id": "GO:0070062", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070062", "evidence": [ { "database": "UniProtKB", "id": "O60512", "url": "https://www.uniprot.org/uniprot/O60512" } ], "pmid": "" }, { "name": "Golgi cisterna membrane", "id": "GO:0032580", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032580", "evidence": [ { "database": "UniProtKB", "id": "O60512", "url": "https://www.uniprot.org/uniprot/O60512" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "protein glycosylation", "id": "GO:0006486", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006486", "evidence": [ { "database": "UniProtKB", "id": "O60512", "url": "https://www.uniprot.org/uniprot/O60512" } ], "pmid": "" }, { "name": "carbohydrate metabolic process", "id": "GO:0005975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005975", "evidence": [ { "database": "UniProtKB", "id": "O60512", "url": "https://www.uniprot.org/uniprot/O60512" } ], "pmid": "" }, { "name": "galactosylceramide biosynthetic process", "id": "GO:0006682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006682", "evidence": [ { "database": "UniProtKB", "id": "O60512", "url": "https://www.uniprot.org/uniprot/O60512" } ], "pmid": "" }, { "name": "glycosylation", "id": "GO:0070085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070085", "evidence": [ { "database": "UniProtKB", "id": "O60512", "url": "https://www.uniprot.org/uniprot/O60512" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "galactosyltransferase activity", "id": "GO:0008378", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008378", "evidence": [ { "database": "UniProtKB", "id": "O60512", "url": "https://www.uniprot.org/uniprot/O60512" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "O60512", "url": "https://www.uniprot.org/uniprot/O60512" } ], "pmid": "" }, { "name": "beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity", "id": "GO:0003831", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003831", "evidence": [ { "database": "UniProtKB", "id": "O60512", "url": "https://www.uniprot.org/uniprot/O60512" } ], "pmid": "" }, { "name": "N-acetyllactosamine synthase activity", "id": "GO:0003945", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003945", "evidence": [ { "database": "UniProtKB", "id": "O60512", "url": "https://www.uniprot.org/uniprot/O60512" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 166, "end_pos": 168, "annotation": "n_glycosylation_sequon" }, { "start_pos": 337, "end_pos": 339, "annotation": "n_glycosylation_sequon" }, { "start_pos": 385, "end_pos": 387, "annotation": "n_glycosylation_sequon" }, { "start_pos": 57, "end_pos": 59, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "17745", "name": "", "equation": "N-acetyl-D-glucosamine + UDP-alpha-D-galactose = beta-D-galactosyl-(1->4)-N-acetyl-D-glucosamine + H(+) + UDP", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [ "P80225-1", "Q66HH1-1", "Q6P768-1", "P15291-1", "O60909-1", "O60512-1", "O60513-1", "Q91YY2-1", "Q9Z2Y2-1", "P15535-1", "Q9JJ04-1" ], "evidence": [ { "id": "17745", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/17745" } ] }, { "id": "22932", "name": "", "equation": "an N-acetyl-beta-D-glucosaminyl derivative + UDP-alpha-D-galactose = a beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + H(+) + UDP", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [ "P80225-1", "Q6P768-1", "P15291-1", "O60909-1", "O60512-1", "Q91YY2-1", "Q9Z2Y2-1", "P15535-1" ], "evidence": [ { "id": "22932", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/22932" } ] }, { "id": "31499", "name": "", "equation": "a beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + UDP-alpha-D-galactose = a neolactoside nLc4Cer(d18:1(4E)) + H(+) + UDP", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [ "Q66HH1-1", "P80225-1", "Q6P768-1", "O60513-1", "P15291-1", "O60512-1", "Q9JJ04-1", "Q91YY2-1", "P15535-1" ], "evidence": [ { "id": "31499", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/31499" } ] }, { "id": "62548", "name": "", "equation": "a neolactoside IV(3)-beta-GlcNAc-nLc4Cer + UDP-alpha-D-galactose = beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->3)-beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->3)-beta-D-galactosyl-(1->4)-beta-D-glucosyl-(1<->1')-ceramide + H(+) + UDP", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [ "P80225-1", "Q6P768-1", "P15291-1", "O60512-1", "Q91YY2-1", "P15535-1" ], "evidence": [ { "id": "62548", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/62548" } ] }, { "id": "62552", "name": "", "equation": "beta-D-glucosylceramide + UDP-alpha-D-galactose = a beta-D-galactosyl-(1->4)-beta-D-glucosyl-(1<->1)-ceramide + H(+) + UDP", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [ "P80225-1", "Q6P768-1", "P15291-1", "O60512-1", "Q91YY2-1", "P15535-1" ], "evidence": [ { "id": "62552", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/62552" } ] }, { "id": "R-HSA-2025723", "name": "B4GALTs transfer Gal to the N-glycan precursor", "equation": "", "summary": "The family of beta 4-galactosyltransferases (B4GALTs) is composed of at least six known members with different Km and acceptor specificities (Guo et al. 2001) that probably originated by gene duplication (Lo et al. 1998). They mediate the transfer of galactose to N-glycan structures which initiate the beginning of keratan sulfate (KS) biosynthesis. B4GALT1 is associated with Congenital Disorder of Glycosylation of type IId (MIM:607091) (Hansske et al. 2002), and is expressed as two splicing isoforms of which only one is localized in the Golgi system (Lopez et al. 1991, Schaub et al. 2006).", "cellular_location": "Golgi lumen, Golgi membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [ "O43286-1", "O60513-1", "O60909-1", "Q9UBX8-1", "O60512-1", "P15291-1" ], "evidence": [ { "id": "R-HSA-2025723", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-2025723" } ] }, { "id": "R-HSA-2046265", "name": "B4GALTs transfer Gal to the keratan chain", "equation": "", "summary": "The family of beta 4-galactosyltransferases (B4GALTs) is composed by at least six known members with different Km and acceptor specificities (Guo et al. 2001) and probably originated by duplication (Lo et al. 1998). They mediate the transfer of galactose to N-glycan structures, either to begin, or in this case, to elongate keratan chains. B4GALT1 is associated with Congenital Disorder of Glycosylation of type IId (MIM:607091) (Hansske et al. 2002), and is expressed as two splicing isoforms of which only one is localized in the Golgi system (Lopez et al. 1991, Schaub et al. 2006).", "cellular_location": "Golgi lumen, Golgi membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [ "O43286-1", "O60513-1", "O60909-1", "Q9UBX8-1", "O60512-1", "P15291-1" ], "evidence": [ { "id": "R-HSA-2046265", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-2046265" } ] }, { "id": "R-HSA-2046298", "name": "B4GALTs transfer Gal to a branch of keratan", "equation": "", "summary": "The family of beta 4-galactosyltransferases (B4GALTs) is composed by at least six known members with different Km and acceptor specificities (Guo et al. 2001) that probably originated by gene duplication (Lo et al. 1998). They mediate the transfer of galactose to N-glycan structures, in this case, to elongate an antenna with a keratan chain. B4GALT1 is associated with Congenital Disorder of Glycosylation of type IId (MIM:607091) (Hansske et al. 2002), and is expressed as two splicing isoforms of which only one is localized in the Golgi system (Lopez et al. 1991, Schaub et al. 2006).", "cellular_location": "Golgi lumen, Golgi membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [ "O43286-1", "O60513-1", "O60909-1", "Q9UBX8-1", "O60512-1", "P15291-1" ], "evidence": [ { "id": "R-HSA-2046298", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-2046298" } ] }, { "id": "R-HSA-975919", "name": "Addition of galactose by beta 4-galactosyltransferases", "equation": "", "summary": "Addition of a galactose residue on N-acetylglucosamine. The family of beta 4-galactosyltransferases is composed by at least six known members with different K(m) and acceptor specifities (Guo S et al, 2001) and probably originated by duplication (Lo NW et al, 1998). B4GALT1 is associated with Congenital Disorder of Glycosylation of type IId (Hansske B et al, 2002), and is expressed as two splicing isoforms of which only one is localizated in the Golgi system (Lopez LC et al, 1991; Schaub BE et al, 2006). B4GALT2 is key in the regulation of proteins involved in neuronal development (Sasaki N et
al, 2005).", "cellular_location": "Golgi lumen, Golgi membrane", "input_participant_list": [], "output_participant_list": [ "R-ALL-981618" ], "enzyme_list": [ "O43286-1", "O60513-1", "O60909-1", "Q9UBX8-1", "O60512-1", "P15291-1" ], "evidence": [ { "id": "R-HSA-975919", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-HSA-975919" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-981618", "participant_name": "Glycoprotein with galactose [Golgi lumen]", "crossref": [ { "id": "33837", "database": "ChEBI", "url": "" }, { "id": "33837", "database": "ChEBI", "url": "" }, { "id": "33837", "database": "ChEBI", "url": "" }, { "id": "33837", "database": "ChEBI", "url": "" }, { "id": "33837", "database": "ChEBI", "url": "" } ] } ], "reaction_enzymes": [ { "uniprot_ac": "O43286", "gene_name": "B4GALT5", "activity": [ { "ec_number": "2.4.1.-", "activity": "", "evidence": [ { "id": "O43286", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/O43286" } ] }, { "ec_number": "2.4.1.274", "activity": "a beta-D-glucosyl-(1<->1')-N-acylsphing-4-enine + UDP-alpha-D-galactose = a beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + H(+) + UDP.", "evidence": [ { "id": "O43286", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/O43286" } ] } ] }, { "uniprot_ac": "O60512", "gene_name": "B4GALT3", "activity": [ { "ec_number": "2.4.1.-", "activity": "", "evidence": [ { "id": "O60512", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/O60512" } ] }, { "ec_number": "2.4.1.275", "activity": "a beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + UDP-alpha-D-galactose = a neolactoside nLc4Cer(d18:1(4E)) + H(+) + UDP.", "evidence": [ { "id": "O60512", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/O60512" } ] }, { "ec_number": "2.4.1.38", "activity": "an N-acetyl-beta-D-glucosaminyl derivative + UDP-alpha-D-galactose = a beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + H(+) + UDP.", "evidence": [ { "id": "O60512", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/O60512" } ] }, { "ec_number": "2.4.1.90", "activity": "N-acetyl-D-glucosamine + UDP-alpha-D-galactose = beta-D-galactosyl-(1->4)-N-acetyl-D-glucosamine + H(+) + UDP.", "evidence": [ { "id": "O60512", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/O60512" } ] } ] }, { "uniprot_ac": "O60513", "gene_name": "B4GALT4", "activity": [ { "ec_number": "2.4.1.-", "activity": "", "evidence": [ { "id": "O60513", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/O60513" } ] }, { "ec_number": "2.4.1.275", "activity": "a beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + UDP-alpha-D-galactose = a neolactoside nLc4Cer(d18:1(4E)) + H(+) + UDP.", "evidence": [ { "id": "O60513", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/O60513" } ] }, { "ec_number": "2.4.1.90", "activity": "N-acetyl-D-glucosamine + UDP-alpha-D-galactose = beta-D-galactosyl-(1->4)-N-acetyl-D-glucosamine + H(+) + UDP.", "evidence": [ { "id": "O60513", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/O60513" } ] } ] }, { "uniprot_ac": "O60909", "gene_name": "B4GALT2", "activity": [ { "ec_number": "2.4.1.-", "activity": "", "evidence": [ { "id": "O60909", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/O60909" } ] }, { "ec_number": "2.4.1.22", "activity": "D-glucose + UDP-alpha-D-galactose = H(+) + lactose + UDP.", "evidence": [ { "id": "O60909", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/O60909" } ] }, { "ec_number": "2.4.1.38", "activity": "an N-acetyl-beta-D-glucosaminyl derivative + UDP-alpha-D-galactose = a beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + H(+) + UDP.", "evidence": [ { "id": "O60909", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/O60909" } ] }, { "ec_number": "2.4.1.90", "activity": "N-acetyl-D-glucosamine + UDP-alpha-D-galactose = beta-D-galactosyl-(1->4)-N-acetyl-D-glucosamine + H(+) + UDP.", "evidence": [ { "id": "O60909", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/O60909" } ] } ] }, { "uniprot_ac": "P15291", "gene_name": "B4GALT1", "activity": [ { "ec_number": "2.4.1.-", "activity": "", "evidence": [ { "id": "P15291", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/P15291" } ] }, { "ec_number": "2.4.1.275", "activity": "a beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + UDP-alpha-D-galactose = a neolactoside nLc4Cer(d18:1(4E)) + H(+) + UDP.", "evidence": [ { "id": "P15291", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/P15291" } ] }, { "ec_number": "2.4.1.22", "activity": "D-glucose + UDP-alpha-D-galactose = H(+) + lactose + UDP.", "evidence": [ { "id": "P15291", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/P15291" } ] }, { "ec_number": "2.4.1.38", "activity": "an N-acetyl-beta-D-glucosaminyl derivative + UDP-alpha-D-galactose = a beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + H(+) + UDP.", "evidence": [ { "id": "P15291", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/P15291" } ] }, { "ec_number": "2.4.1.90", "activity": "N-acetyl-D-glucosamine + UDP-alpha-D-galactose = beta-D-galactosyl-(1->4)-N-acetyl-D-glucosamine + H(+) + UDP.", "evidence": [ { "id": "P15291", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/P15291" } ] } ] }, { "uniprot_ac": "P15535", "gene_name": "B4galt1", "activity": [ { "ec_number": "2.4.1.-", "activity": "", "evidence": [ { "id": "P15535", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/P15535" } ] }, { "ec_number": "2.4.1.275", "activity": "a beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + UDP-alpha-D-galactose = a neolactoside nLc4Cer(d18:1(4E)) + H(+) + UDP.", "evidence": [ { "id": "P15535", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/P15535" } ] }, { "ec_number": "2.4.1.22", "activity": "D-glucose + UDP-alpha-D-galactose = H(+) + lactose + UDP.", "evidence": [ { "id": "P15535", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/P15535" } ] }, { "ec_number": "2.4.1.38", "activity": "an N-acetyl-beta-D-glucosaminyl derivative + UDP-alpha-D-galactose = a beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + H(+) + UDP.", "evidence": [ { "id": "P15535", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/P15535" } ] }, { "ec_number": "2.4.1.90", "activity": "N-acetyl-D-glucosamine + UDP-alpha-D-galactose = beta-D-galactosyl-(1->4)-N-acetyl-D-glucosamine + H(+) + UDP.", "evidence": [ { "id": "P15535", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/P15535" } ] } ] }, { "uniprot_ac": "P80225", "gene_name": "B4galt1", "activity": [ { "ec_number": "2.4.1.-", "activity": "", "evidence": [ { "id": "P80225", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/P80225" } ] }, { "ec_number": "2.4.1.275", "activity": "a beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + UDP-alpha-D-galactose = a neolactoside nLc4Cer(d18:1(4E)) + H(+) + UDP.", "evidence": [ { "id": "P80225", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/P80225" } ] }, { "ec_number": "2.4.1.22", "activity": "D-glucose + UDP-alpha-D-galactose = H(+) + lactose + UDP.", "evidence": [ { "id": "P80225", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/P80225" } ] }, { "ec_number": "2.4.1.38", "activity": "an N-acetyl-beta-D-glucosaminyl derivative + UDP-alpha-D-galactose = a beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + H(+) + UDP.", "evidence": [ { "id": "P80225", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/P80225" } ] }, { "ec_number": "2.4.1.90", "activity": "N-acetyl-D-glucosamine + UDP-alpha-D-galactose = beta-D-galactosyl-(1->4)-N-acetyl-D-glucosamine + H(+) + UDP.", "evidence": [ { "id": "P80225", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/P80225" } ] } ] }, { "uniprot_ac": "Q66HH1", "gene_name": "B4galt4", "activity": [ { "ec_number": "2.4.1.-", "activity": "", "evidence": [ { "id": "Q66HH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q66HH1" } ] }, { "ec_number": "2.4.1.275", "activity": "a beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + UDP-alpha-D-galactose = a neolactoside nLc4Cer(d18:1(4E)) + H(+) + UDP.", "evidence": [ { "id": "Q66HH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q66HH1" } ] }, { "ec_number": "2.4.1.90", "activity": "N-acetyl-D-glucosamine + UDP-alpha-D-galactose = beta-D-galactosyl-(1->4)-N-acetyl-D-glucosamine + H(+) + UDP.", "evidence": [ { "id": "Q66HH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q66HH1" } ] } ] }, { "uniprot_ac": "Q6P768", "gene_name": "B4galt3", "activity": [ { "ec_number": "2.4.1.-", "activity": "", "evidence": [ { "id": "Q6P768", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q6P768" } ] }, { "ec_number": "2.4.1.275", "activity": "a beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + UDP-alpha-D-galactose = a neolactoside nLc4Cer(d18:1(4E)) + H(+) + UDP.", "evidence": [ { "id": "Q6P768", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q6P768" } ] }, { "ec_number": "2.4.1.38", "activity": "an N-acetyl-beta-D-glucosaminyl derivative + UDP-alpha-D-galactose = a beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + H(+) + UDP.", "evidence": [ { "id": "Q6P768", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q6P768" } ] }, { "ec_number": "2.4.1.90", "activity": "N-acetyl-D-glucosamine + UDP-alpha-D-galactose = beta-D-galactosyl-(1->4)-N-acetyl-D-glucosamine + H(+) + UDP.", "evidence": [ { "id": "Q6P768", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q6P768" } ] } ] }, { "uniprot_ac": "Q91YY2", "gene_name": "B4galt3", "activity": [ { "ec_number": "2.4.1.275", "activity": "a beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + UDP-alpha-D-galactose = a neolactoside nLc4Cer(d18:1(4E)) + H(+) + UDP.", "evidence": [ { "id": "Q91YY2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q91YY2" } ] }, { "ec_number": "2.4.1.38", "activity": "an N-acetyl-beta-D-glucosaminyl derivative + UDP-alpha-D-galactose = a beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + H(+) + UDP.", "evidence": [ { "id": "Q91YY2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q91YY2" } ] }, { "ec_number": "2.4.1.90", "activity": "N-acetyl-D-glucosamine + UDP-alpha-D-galactose = beta-D-galactosyl-(1->4)-N-acetyl-D-glucosamine + H(+) + UDP.", "evidence": [ { "id": "Q91YY2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q91YY2" } ] }, { "ec_number": "2.4.1.90", "activity": "", "evidence": [ { "id": "Q91YY2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q91YY2" } ] }, { "ec_number": "2.4.1.38", "activity": "", "evidence": [ { "id": "Q91YY2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q91YY2" } ] }, { "ec_number": "2.4.1.275", "activity": "", "evidence": [ { "id": "Q91YY2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q91YY2" } ] }, { "ec_number": "2.4.1.-", "activity": "", "evidence": [ { "id": "Q91YY2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q91YY2" } ] } ] }, { "uniprot_ac": "Q9JJ04", "gene_name": "B4galt4", "activity": [ { "ec_number": "2.4.1.-", "activity": "", "evidence": [ { "id": "Q9JJ04", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q9JJ04" } ] }, { "ec_number": "2.4.1.275", "activity": "a beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + UDP-alpha-D-galactose = a neolactoside nLc4Cer(d18:1(4E)) + H(+) + UDP.", "evidence": [ { "id": "Q9JJ04", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q9JJ04" } ] }, { "ec_number": "2.4.1.90", "activity": "N-acetyl-D-glucosamine + UDP-alpha-D-galactose = beta-D-galactosyl-(1->4)-N-acetyl-D-glucosamine + H(+) + UDP.", "evidence": [ { "id": "Q9JJ04", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q9JJ04" } ] } ] }, { "uniprot_ac": "Q9UBX8", "gene_name": "B4GALT6", "activity": [ { "ec_number": "2.4.1.-", "activity": "", "evidence": [ { "id": "Q9UBX8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q9UBX8" } ] }, { "ec_number": "2.4.1.274", "activity": "a beta-D-glucosyl-(1<->1')-N-acylsphing-4-enine + UDP-alpha-D-galactose = a beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + H(+) + UDP.", "evidence": [ { "id": "Q9UBX8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q9UBX8" } ] } ] }, { "uniprot_ac": "Q9Z2Y2", "gene_name": "B4galt2", "activity": [ { "ec_number": "2.4.1.-", "activity": "", "evidence": [ { "id": "Q9Z2Y2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q9Z2Y2" } ] }, { "ec_number": "2.4.1.22", "activity": "D-glucose + UDP-alpha-D-galactose = H(+) + lactose + UDP.", "evidence": [ { "id": "Q9Z2Y2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q9Z2Y2" } ] }, { "ec_number": "2.4.1.38", "activity": "an N-acetyl-beta-D-glucosaminyl derivative + UDP-alpha-D-galactose = a beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + H(+) + UDP.", "evidence": [ { "id": "Q9Z2Y2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q9Z2Y2" } ] }, { "ec_number": "2.4.1.90", "activity": "N-acetyl-D-glucosamine + UDP-alpha-D-galactose = beta-D-galactosyl-(1->4)-N-acetyl-D-glucosamine + H(+) + UDP.", "evidence": [ { "id": "Q9Z2Y2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q9Z2Y2" } ] } ] } ], "biomarkers": [], "synthesized_glycans": [ { "glytoucan_ac": "G00025HU", "type": "N-linked", "subtype": "Complex" }, { "glytoucan_ac": "G00025YC", "type": "N-linked", "subtype": "Triantennary" }, { "glytoucan_ac": "G00027JG", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00030HB", "type": "N-linked", "subtype": "Triantennary" }, { "glytoucan_ac": "G00034UM", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00069YC", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00079IK", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00091UN", "type": "N-linked", "subtype": "Core-fucosylated" }, { "glytoucan_ac": "G00104PH", "type": "N-linked", "subtype": "Triantennary" }, { "glytoucan_ac": "G00112IO", "type": "O-linked", "subtype": "Core 3" }, { "glytoucan_ac": "G00113FP", "type": "N-linked", "subtype": "Complex" }, { "glytoucan_ac": "G00152UP", "type": "N-linked", "subtype": "Hybrid" }, { "glytoucan_ac": "G00155YT", "type": "N-linked", "subtype": "Triantennary" }, { "glytoucan_ac": "G00164QP", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00186OS", "type": "N-linked", "subtype": "Complex" }, { "glytoucan_ac": "G00196CO", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00201AB", "type": "N-linked", "subtype": "Complex" }, { "glytoucan_ac": "G00210ZX", "type": "N-linked", "subtype": "Complex" }, { "glytoucan_ac": "G00212RH", "type": "N-linked", "subtype": "Triantennary" }, { "glytoucan_ac": "G00231WL", "type": "N-linked", "subtype": "Tetraantennary" }, { "glytoucan_ac": "G00241VQ", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00247PL", "type": "N-linked", "subtype": "Hybrid" }, { "glytoucan_ac": "G00288RP", "type": "O-linked", "subtype": "Core 6" }, { "glytoucan_ac": "G00321UH", "type": "O-linked", "subtype": "Core 3" }, { "glytoucan_ac": "G00349CA", "type": "N-linked", "subtype": "Hybrid" }, { "glytoucan_ac": "G00368HM", "type": "N-linked", "subtype": "Triantennary" }, { "glytoucan_ac": "G00369RM", "type": "N-linked", "subtype": "Tetraantennary" }, { "glytoucan_ac": "G00376RB", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00383NC", "type": "O-linked", "subtype": "Core 3" }, { "glytoucan_ac": "G00383YF", "type": "N-linked", "subtype": "Triantennary" }, { "glytoucan_ac": "G00394CR", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00396IE", "type": "N-linked", "subtype": "Complex" }, { "glytoucan_ac": "G00413UF", "type": "N-linked", "subtype": "Triantennary" }, { "glytoucan_ac": "G00420CS", "type": "N-linked", "subtype": "Triantennary" }, { "glytoucan_ac": "G00428HK", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00430ZK", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00432WV", "type": "N-linked", "subtype": "Triantennary" }, { "glytoucan_ac": "G00438EF", "type": "N-linked", "subtype": "Triantennary" }, { 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