{
    "bcoid": "GLY_000527",
    "title": "Sandbox accessions (GlyTouCan Accession)",
    "description": "The dataset includes GlyTouCan accessions included in Sandbox application.",
    "filename": "glycan_xref_sandbox.csv",
    "filetype": "csv",
    "categories": {
        "molecule": [
            "Glycan"
        ],
        "tag": [
            "Sanbox Glycan accessions"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "species": [
            "Homo sapiens",
            "Mus musculus",
            "Sus scrofa",
            "Drosophila melanogaster",
            "Rattus norvegicus",
            "Severe acute respiratory syndrome coronavirus 2",
            "Rattus",
            "Sus scrofa domesticus",
            "Saccharomyces cerevisiae",
            "Hepacivirus C",
            "Dictyostelium discoideum"
        ]
    },
    "minitable": {
        "content": [
            [
                "G00002CF...",
                "G00002CF..."
            ],
            [
                "G00012MO...",
                "G00012MO..."
            ]
        ],
        "headers": [
            "glytoucan_ac...",
            "xref_id..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "glytoucan_ac"
                },
                {
                    "type": "string",
                    "label": "xref_id"
                },
                {
                    "type": "string",
                    "label": "xref_key"
                }
            ],
            [
                "G00002CF",
                "G00002CF",
                "glycan_xref_sandbox"
            ],
            [
                "G00012MO",
                "G00012MO",
                "glycan_xref_sandbox"
            ]
        ]
    },
    "readme": "Name\n   - Sandbox accessions (GlyTouCan Accession)\n\nVersion\n   - v-2.5.1\n\nCreated on\n  - 2020-09-10T15:28:11.224030\n\nModified on\n   - 2024-05-17T11:24:03.592Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - Will York [will@ccrc.uga.edu], Will York [will@ccrc.uga.edu]\n\nChecksum\n   - \n\nUsability Domain\n   - The dataset includes GlyTouCan accessions included in Sandbox application.\n\nDescription Domain\n   Keywords\n   - GlyTouCan accessions\n   - Glycans\n   - Sandbox\n\n   Pipeline Steps\n   - Step-1: The dataset was directly downloaded from the provider and a script was used to check if the GlyTouCan Ac is included in the glycan masterlist (https://data.glygen.org/GLY_000281)\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: glycan_masterlist.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.5.1/reviewed/glycan_masterlist.csv\n      Name: accessionlist.csv\n      URI: https:/data.glygen.org/ln2downloads/sandbox/04_30_2024/accessionlist.csv\n   Output Subdomain\n      Name: glycan_xref_sandbox.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.5.1/reviewed/glycan_xref_sandbox.csv\n      Name: glycan_xref_sandbox.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.5.1/reviewed/glycan_xref_sandbox.stat.csv\n\nFields\n      Name: \"glytoucan_ac\"\n     Description: \"Unique accession assigned to the registered glycan structure in GlyTouCan database\"\n      Unique Values: \"27456\"\n      Name: \"xref_id\"\n     Description: \"ID of the X-ref\"\n      Unique Values: \"27456\"\n      Name: \"xref_key\"\n     Description: \"Source key associated to the  xref_id\"\n      Unique Values: \"1\"",
    "downloadurl": "/ln2data/releases/data/v-2.5.1/reviewed/glycan_xref_sandbox.csv"
}