{ "uniprot_canonical_ac": "O94818-1", "uniprot_ac": "O94818", "uniprot_id": "NOL4_HUMAN", "mass": { "chemical_mass": 71357.0, "monoisotopic_mass": 71357.0 }, "refseq": { "ac": "NP_001185475", "name": "nucleolar protein 4 isoform 2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185475" }, "gene_names": [ { "name": "NOL4", "resource": "UniProtKB", "type": "recommended", "url": "https://www.uniprot.org/uniprot/O94818", "id": "O94818" }, { "name": "CT125; HRIHFB2255; NOLP", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185475", "id": "NP_001185475" }, { "name": "HRIHFB2255", "resource": "UniProtKB", "type": "synonym", "url": "https://www.uniprot.org/uniprot/O94818", "id": "O94818" }, { "name": "NOL4", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185475", "id": "NP_001185475" }, { "name": "NOLP", "resource": "UniProtKB", "type": "synonym", "url": "https://www.uniprot.org/uniprot/O94818", "id": "O94818" } ], "protein_names": [ { "name": "Nucleolar protein 4", "resource": "UniProtKB", "type": "recommended", "url": "", "id": "O94818" }, { "name": "Nucleolar-localized protein", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "O94818" }, { "name": "nucleolar localized protein; cancer/testis antigen 125", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185475", "id": "NP_001185475" }, { "name": "nucleolar protein 4 isoform 2", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185475", "id": "NP_001185475" } ], "function": [ { "annotation": "Cancer Testis Antigen, NOL4, Is an Immunogenic Antigen Specifically Expressed in Small-Cell Lung Cancer. Publication Status: Online-Only", "evidence": [ { "database": "RefSeq", "id": "NP_001185475", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185475" }, { "database": "PubMed", "id": "34065612", "url": "https://glygen.org/publication/PubMed/34065612" } ] }, { "annotation": "Genome-wide association study of age at menarche in the Taiwan Biobank suggests NOL4 as a novel associated gene.", "evidence": [ { "database": "RefSeq", "id": "NP_001185475", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185475" }, { "database": "PubMed", "id": "36710296", "url": "https://glygen.org/publication/PubMed/36710296" } ] }, { "annotation": "NOL4 is a novel nuclear marker of small cell carcinoma and other neuroendocrine neoplasms.", "evidence": [ { "database": "RefSeq", "id": "NP_001185475", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185475" }, { "database": "PubMed", "id": "36282054", "url": "https://glygen.org/publication/PubMed/36282054" } ] }, { "annotation": "NOL4 was identified as a highly specific promoter methylated gene associated with head and neck squamous cell carcinoma", "evidence": [ { "database": "RefSeq", "id": "NP_001185475", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185475" }, { "database": "PubMed", "id": "24337411", "url": "https://glygen.org/publication/PubMed/24337411" } ] }, { "annotation": "The cosegregation of an intronic rare variant in NOL4 in one family, and a haplotype consisting of three variants in the noncoding region of IRF6 (introns 1, 8 and 3'UTR) in the other family, are reported.", "evidence": [ { "database": "RefSeq", "id": "NP_001185475", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185475" }, { "database": "PubMed", "id": "29666346", "url": "https://glygen.org/publication/PubMed/29666346" } ] } ], "disease": [], "snv": [ { "evidence": [ { "id": "O94818", "database": "BioMuta", "url": "https://hive.biochemistry.gwu.edu/biomuta/proteinview/O94818" } ], "glycoeffect": [ "o-glyco-site-loss" ], "start_pos": 114, "end_pos": 114, "subjects_tested": "0", "subjects_positive": "0", "frequency": "0.0", "sequence_org": "S", "sequence_mut": "L", "comment": "Somatic mutation passed 1 out of 6 filters: num. of cancers (3).", "chr_id": "18", "chr_pos": "34129944", "ref_nt": "G", "alt_nt": "A", "minor_allelic_frequency": "", "site_lbl": "S114", "disease": [ { "disease_id": "DOID:11934", "recommended_name": { "id": "DOID:11934", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:11934", "name": "head and neck cancer", "description": "An organ system cancer that arises in the head or neck region. 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Male", "description": "" }, { "id": "MIM:114480", "resource": "MIM", "url": "https://www.omim.org/entry/114480", "name": "Breast cancer", "description": "Breast cancer" } ] } ] }, { "significant": "Yes", "trend": "down", "name": "Thyroid cancer [DO disease name]", "url": "http://disease-ontology.org/term/DOID:1781", "evidence": [ { "database": "BioXpress", "id": "O94818", "url": "https://hive.biochemistry.gwu.edu/bioxpress/transcriptview/O94818" } ], "disease": [ { "disease_id": "DOID:1781", "recommended_name": { "id": "DOID:1781", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:1781", "name": "thyroid cancer", "description": "An endocrine gland cancer located in the thryoid gland located in the neck below the thyroid cartilage." }, "synonyms": [ { "id": "DOID:1781", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:1781", "name": "thyroid gland cancer", "description": "" }, { "id": "DOID:1781", "resource": "Disease Ontology", 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"https://hive.biochemistry.gwu.edu/bioxpress/transcriptview/O94818" } ], "disease": [ { "disease_id": "DOID:263", "recommended_name": { "id": "DOID:263", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:263", "name": "kidney cancer", "description": "A urinary system cancer that is located_in the kidney." }, "synonyms": [ { "id": "DOID:263", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:263", "name": "malignant neoplasm of kidney except pelvis", "description": "" }, { "id": "DOID:263", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:263", "name": "malignant tumour of kidney", "description": "" }, { "id": "DOID:263", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:263", "name": "renal cancer", "description": "" } ] } ] }, { "significant": "Yes", "trend": "down", "name": "Liver cancer [DO disease name]", "url": "http://disease-ontology.org/term/DOID:3571", "evidence": [ 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"http://disease-ontology.org/term/DOID:3571", "name": "non-resectable primary hepatic malignant neoplasm", "description": "" }, { "id": "DOID:3571", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:3571", "name": "primary liver cancer", "description": "" }, { "id": "DOID:3571", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:3571", "name": "primary malignant neoplasm of liver", "description": "" }, { "id": "DOID:3571", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:3571", "name": "resectable malignant neoplasm of the liver", "description": "" }, { "id": "DOID:3571", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:3571", "name": "malignant neoplasm of liver, not specified as primary or secondary", "description": "" } ] } ] }, { "significant": "Yes", "trend": "up", "name": "Uterine cancer [DO disease name]", "url": "http://disease-ontology.org/term/DOID:363", 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"https://monarchinitiative.org/disease/MONDO:0007576", "name": "esophageal squamous cell carcinoma, susceptibility to", "description": "" }, { "id": "MONDO:0007576", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007576", "name": "gastric cardia adenocarcinoma, susceptibility to", "description": "" }, { "id": "MIM:133239", "resource": "MIM", "url": "https://www.omim.org/entry/133239", "name": "Esophageal cancer", "description": "Esophageal cancer" } ] } ] }, { "significant": "Yes", "trend": "down", "name": "Colorectal cancer [DO disease name]", "url": "http://disease-ontology.org/term/DOID:9256", "evidence": [ { "database": "BioXpress", "id": "O94818", "url": "https://hive.biochemistry.gwu.edu/bioxpress/transcriptview/O94818" } ], "disease": [ { "disease_id": "DOID:9256", "recommended_name": { "id": "DOID:9256", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:9256", "name": "colorectal cancer", "description": "A large intestine cancer that is located_in the colon and/or located_in the rectum." }, "synonyms": [ { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colorectal cancer", "description": "A primary or metastatic malignant neoplasm that affects the colon or rectum. Representative examples include carcinoma, lymphoma, and sarcoma." }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "cancer of colorectum", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "cancer of large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "cancer of large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "cancer of the large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colon cancer, advanced, somatic", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colon cancer, somatic", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colorectal cancer", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colorectal cancer with chromosomal instability, somatic", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colorectal cancer, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colorectal cancer, somatic", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colorectal cancer, susceptibility to, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colorectum cancer", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant colorectal neoplasm", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant colorectal tumor", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant colorectal tumour", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant colorectum neoplasm", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant large bowel neoplasm", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant large bowel tumor", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant large bowel tumour", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant large intestine neoplasm", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant large intestine tumor", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant large intestine tumour", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant neoplasm of colorectum", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant neoplasm of large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant neoplasm of large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant neoplasm of the large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant neoplasm of the large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumor of large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumor of large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumor of the large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumor of the large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumour of large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumour of large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumour of the large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumour of the large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "CRC", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colon cancer", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colon cancer, susceptibility to, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "large intestine cancer", "description": "" }, { "id": "MIM:114500", "resource": "MIM", "url": "https://www.omim.org/entry/114500", "name": "Colorectal cancer", "description": "Colorectal cancer" } ] } ] } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O94818", "url": "https://www.uniprot.org/uniprot/O94818" } ], "common_name": "Human" } ], "gene": [ { "name": "NOL4", "url": "https://www.uniprot.org/uniprot/O94818", "locus": { "chromosome": "18", "start_pos": 33851100, "end_pos": 34224952, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSG00000101746", "url": "https://www.ensembl.org/id/ENSG00000101746" } ] } } ], "crossref": [ { "id": "ENSG00000101746", "url": "https://bgee.org/?page=gene&gene_id=ENSG00000101746", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "O94818", "url": "https://hive.biochemistry.gwu.edu/biomuta/proteinview/O94818", "database": "BioMuta", "categories": [ "Variation" ] }, { "id": "NOL4", "url": "http://www.genecards.org/cgi-bin/carddisp.pl?gene=NOL4", "database": "GeneCards", "categories": [ "Gene Annotation", "Organism-specific" ] }, { "id": "8715", "url": "https://www.ncbi.nlm.nih.gov/gene/8715", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "7870", "url": "https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=7870", "database": "HGNC", "categories": [ "Organism-specific" ] }, { "id": "O94818", "url": "https://www.ebi.ac.uk/intact/interactors/id:O94818*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR039788", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039788", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "hsa:8715", "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+hsa:8715", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "603577", "url": "http://www.omim.org/entry/603577", "database": "MIM", "categories": [ "Other" ] }, { "id": "NX_O94818", "url": "https://www.nextprot.org/entry/NX_O94818", "database": "neXtProt", "categories": [ "Protein", "Organism-specific" ] }, { "id": "DEXDSAA", "url": "https://omabrowser.org/oma/group/DEXDSAA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "2967357at2759", "url": "http://www.orthodb.org/?query=2967357at2759", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12449", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12449", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12449:SF17", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12449:SF17", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "O94818", "url": "https://pharos.nih.gov/targets/O94818", "database": "PHAROS", "categories": [ "Organism-specific" ] }, { "id": "PR_O94818", "url": "http://purl.obolibrary.org/obo/PR_O94818", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_001185475", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185475", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "K7EID6", "url": "https://www.uniprot.org/uniprot/K7EID6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7EID6-1", "url": "https://www.uniprot.org/uniprot/K7EID6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7EIK8", "url": "https://www.uniprot.org/uniprot/K7EIK8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7EIK8-1", "url": "https://www.uniprot.org/uniprot/K7EIK8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7ENM5", "url": "https://www.uniprot.org/uniprot/K7ENM5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7ENM5-1", "url": "https://www.uniprot.org/uniprot/K7ENM5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7EPC5", "url": "https://www.uniprot.org/uniprot/K7EPC5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7EPC5-1", "url": "https://www.uniprot.org/uniprot/K7EPC5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7EQ17", "url": "https://www.uniprot.org/uniprot/K7EQ17", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7EQ17-1", "url": "https://www.uniprot.org/uniprot/K7EQ17-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "O94818", "url": "https://www.uniprot.org/uniprot/O94818", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "O94818-1", "url": "https://www.uniprot.org/uniprot/O94818-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "O94818-2", "url": "https://www.uniprot.org/uniprot/O94818-2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "O94818-3", "url": "https://www.uniprot.org/uniprot/O94818-3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "O94818-4", "url": "https://www.uniprot.org/uniprot/O94818-4", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MESERDMYRQFQDWCLRTYGDSGKTKTVTRKKYERIVQLLNGSESSSTDNAKFKFWVKSKGFQLGQPDEVRGGGGGAKQVLYVPVKTTDGVGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAISESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERMQSPQNLHGQQDDDSAAESFNGNETLGHSSIASGGTHSREMGDSNSDGKTGLEQDEQPLNLSDSPLSAQLTSEYRIDDHNSNGKNKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDDHEDHDDSEKVNETDGVEAERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQFPEYQERARKRIRTYLKSCRRMKRSGFEMSRPIPSHLTSAVAESILASACESESRNAAKRMRLERQQDESAPADKQCKPEATQATYSTSAVPGSQDVLYINGNGTYSYHSYRGLGGGLLNLNDASSSGPTDLSMKRQLATSSGSSSSSNSRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN", "length": 638, "header": "sp|O94818-1|NOL4_HUMAN Isoform 1 of Nucleolar protein 4 OS=Homo sapiens OX=9606 GN=NOL4 PE=1 SV=2 CANONICAL=O94818-1" }, "isoforms": [ { "isoform_ac": "K7EID6-1", "url": "", "sequence": { "sequence": "MADLMQETFLHHATDGVGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAIQKNV", "length": 69, "header": "tr|K7EID6-1|NOL4_HUMAN Computationally mapped isoform of Nucleolar protein 4 OS=Homo sapiens OX=9606 GN=NOL4 PE=1 SV=1 CANONICAL=O94818-1" }, "locus": { "chromosome": "18", "start_pos": 34222061, "end_pos": 34128875, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENST00000586314.5", "url": "https://www.ensembl.org/id/ENST00000586314.5" }, { "database": "Ensembl Peptide", "id": "ENSP00000464704.1", "url": "https://www.ensembl.org/id/ENSP00000464704.1" } ] } }, { "isoform_ac": "K7EIK8-1", "url": "", "sequence": { "sequence": "MADLMQETFLHHATGYTTIYPFTC", "length": 24, "header": "tr|K7EIK8-1|NOL4_HUMAN Computationally mapped isoform of Nucleolar protein 4 OS=Homo sapiens OX=9606 GN=NOL4 PE=1 SV=1 CANONICAL=O94818-1" }, "locus": { "chromosome": "18", "start_pos": 34222061, "end_pos": 34183597, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENST00000586309.1", "url": "https://www.ensembl.org/id/ENST00000586309.1" }, { "database": "Ensembl Peptide", "id": "ENSP00000464790.1", "url": "https://www.ensembl.org/id/ENSP00000464790.1" } ] } }, { "isoform_ac": "K7ENM5-1", "url": "", "sequence": { "sequence": "MDQTMLDDSAAESFNGNETLGHSSIASGGTHSREMGDSNSDGKTGLEQDEQPLNLSDSPLSAQLTSEYRIDDHNSNGKNKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDDHEDHDDSEKVNETDGVEAERLKAFNSRPIPSHLTSAVAESILASACESESRNAAKRMRLERQQDESAPADKQCKPEATQATYS", "length": 219, "header": "tr|K7ENM5-1|K7ENM5_HUMAN Computationally mapped isoform of Nucleolar protein 4 OS=Homo sapiens OX=9606 GN=NOL4 PE=1 SV=1 CANONICAL=O94818-1" }, "locus": { "chromosome": "18", "start_pos": 34023458, "end_pos": 33883365, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENST00000586553.1", "url": "https://www.ensembl.org/id/ENST00000586553.1" }, { "database": "Ensembl Peptide", "id": "ENSP00000467015.1", "url": "https://www.ensembl.org/id/ENSP00000467015.1" } ] } }, { "isoform_ac": "K7EPC5-1", "url": "", "sequence": { "sequence": "MADLMQETFLHHATDGVGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAGPREI", "length": 69, "header": "tr|K7EPC5-1|K7EPC5_HUMAN Computationally mapped isoform of Nucleolar protein 4 OS=Homo sapiens OX=9606 GN=NOL4 PE=4 SV=1 CANONICAL=O94818-1" }, "locus": { "chromosome": "18", "start_pos": 34222061, "end_pos": 34121302, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENST00000591917.5", "url": "https://www.ensembl.org/id/ENST00000591917.5" }, { "database": "Ensembl Peptide", "id": "ENSP00000467326.1", "url": "https://www.ensembl.org/id/ENSP00000467326.1" } ] } }, { "isoform_ac": "K7EQ17-1", "url": "", "sequence": { "sequence": "RTYGDSGKTKTVTRKKYERIVQLLNGSESSSTDNAKFKFWVKSKGFQLGQPDEVRGGGGGAKQVLYVPVKTTDGVGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAISESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERMQSPQNLHGQQDDDSAAESFNGNETLGHSSIASGGTHSREMGDSNSDGKTGLEQDEQPLNLSDSPLSAQLTSEYRIDDHNSNGKNKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDDHEDHDDSEKVNETDGVEAERLKAFNSRPIPSHLTSAVAESILASACESESRNAAKRMRLERQQDESAPADKQCKPEATQATYSTSAVPGSQDVLYINGNGTYSYHSYRGLGGGLLNLNDASSSGPTDLSMKRQLATSSGSSSSSNSRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN", "length": 558, "header": "tr|K7EQ17-1|NOL4_HUMAN Computationally mapped isoform of Nucleolar protein 4 OS=Homo sapiens OX=9606 GN=NOL4 PE=1 SV=1 CANONICAL=O94818-1" }, "locus": { "chromosome": "18", "start_pos": 34223205, "end_pos": 33852845, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENST00000590712.5", "url": "https://www.ensembl.org/id/ENST00000590712.5" }, { "database": "Ensembl Peptide", "id": "ENSP00000467629.1", "url": "https://www.ensembl.org/id/ENSP00000467629.1" } ] } }, { "isoform_ac": "O94818-1", "url": "", "sequence": { "sequence": "MESERDMYRQFQDWCLRTYGDSGKTKTVTRKKYERIVQLLNGSESSSTDNAKFKFWVKSKGFQLGQPDEVRGGGGGAKQVLYVPVKTTDGVGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAISESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERMQSPQNLHGQQDDDSAAESFNGNETLGHSSIASGGTHSREMGDSNSDGKTGLEQDEQPLNLSDSPLSAQLTSEYRIDDHNSNGKNKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDDHEDHDDSEKVNETDGVEAERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQFPEYQERARKRIRTYLKSCRRMKRSGFEMSRPIPSHLTSAVAESILASACESESRNAAKRMRLERQQDESAPADKQCKPEATQATYSTSAVPGSQDVLYINGNGTYSYHSYRGLGGGLLNLNDASSSGPTDLSMKRQLATSSGSSSSSNSRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN", "length": 638, "header": "sp|O94818-1|NOL4_HUMAN Isoform 1 of Nucleolar protein 4 OS=Homo sapiens OX=9606 GN=NOL4 PE=1 SV=2 CANONICAL=O94818-1" }, "locus": { "chromosome": "18", "start_pos": 34223253, "end_pos": 33852845, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENST00000261592.10", "url": "https://www.ensembl.org/id/ENST00000261592.10" }, { "database": "Ensembl Peptide", "id": "ENSP00000261592.4", "url": "https://www.ensembl.org/id/ENSP00000261592.4" } ] } }, { "isoform_ac": "O94818-2", "url": "", "sequence": { "sequence": "MESERDMYRQFQDWCLRTYGDSGKTKTVTRKKYERIVQLLNGSESSSTDNAKFKFWVKSKGFQLGQPDEVRGGGGGAKQVLYVPVKTTDGVGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAISESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERMQSPQNLHGQQDDDSAAESFNGNETLGHSSIASGGTHSREMGDSNSDGKTGLEQDEQPLNLSDSPLSAQLTSEYRIDDHNSNGKNKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDDHEDHDDSEKVNETDGVEAERLKAFNDESAPADKQCKPEATQATYSTSAVPGSQDVLYINGNGTYSYHSYRGLGGGLLNLNDASSSGPTDLSMKRQLATSSGSSSSSNSRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN", "length": 536, "header": "sp|O94818-2|NOL4_HUMAN Isoform 2 of Nucleolar protein 4 OS=Homo sapiens OX=9606 GN=NOL4 PE=1 SV=2 CANONICAL=O94818-1" }, "locus": { "chromosome": "18", "start_pos": 34223253, "end_pos": 33852845, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENST00000589544.5", "url": "https://www.ensembl.org/id/ENST00000589544.5" }, { "database": "Ensembl Peptide", "id": "ENSP00000465450.1", "url": "https://www.ensembl.org/id/ENSP00000465450.1" } ] } }, { "isoform_ac": "O94818-3", "url": "", "sequence": { "sequence": "MADLMQETFLHHATDGVGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAISESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERMQSPQNLHGQQDDDSAAESFNGNETLGHSSIASGGTHSREMGDSNSDGKTGLEQDEQPLNLSDSPLSAQLTSEYRIDDHNSNGKNKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDDHEDHDDSEKVNETDGVEAERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQFPEYQERARKRIRTYLKSCRRMKRSGFEMSRPIPSHLTSAVAESILASACESESRNAAKRMRLERQQDESAPADKQCKPEATQATYSTSAVPGSQDVLYINGNGTYSYHSYRGLGGGLLNLNDASSSGPTDLSMKRQLATSSGSSSSSNSRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN", "length": 564, "header": "sp|O94818-3|NOL4_HUMAN Isoform 3 of Nucleolar protein 4 OS=Homo sapiens OX=9606 GN=NOL4 PE=1 SV=2 CANONICAL=O94818-1" }, "locus": { "chromosome": "18", "start_pos": 34222061, "end_pos": 33852845, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENST00000538587.5", "url": "https://www.ensembl.org/id/ENST00000538587.5" }, { "database": "Ensembl Peptide", "id": "ENSP00000443472.1", "url": "https://www.ensembl.org/id/ENSP00000443472.1" } ] } }, { "isoform_ac": "O94818-4", "url": "", "sequence": { "sequence": "MGDSNSDGKTGLEQDEQPLNLSDSPLSAQLTSEYRIDDHNSNGKNKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDDHEDHDDSEKVNETDGVEAERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQFPEYQERARKRIRTYLKSCRRMKRSGFEMSRPIPSHLTSAVAESILASACESESRNAAKRMRLERQQDESAPADKQCKPEATQATYSTSAVPGSQDVLYINGNGTYSYHSYRGLGGGLLNLNDASSSGPTDLSMKRQLATSSGSSSSSNSRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN", "length": 353, "header": "sp|O94818-4|NOL4_HUMAN Isoform 4 of Nucleolar protein 4 OS=Homo sapiens OX=9606 GN=NOL4 PE=1 SV=2 CANONICAL=O94818-1" }, "locus": { "chromosome": "18", "start_pos": 34019518, "end_pos": 33852845, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENST00000535384.5", "url": "https://www.ensembl.org/id/ENST00000535384.5" }, { "database": "Ensembl Peptide", "id": "ENSP00000445733.1", "url": "https://www.ensembl.org/id/ENSP00000445733.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Validation of nucleolar protein 4 as a novel methylated tumor suppressor gene in head and neck cancer.", "journal": "Oncology reports", "date": "2014", "authors": "Demokan S, Chuang AY, Pattani KM, Sidransky D, Koch W, Califano JA", "evidence": [ { "database": "RefSeq", "id": "NP_001185475", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185475" } ], "reference": [ { "type": "PubMed", "id": "24337411", "url": "https://glygen.org/publication/PubMed/24337411" } ] }, { "title": "Genetic heterogeneity in Van der Woude syndrome: identification of NOL4 and IRF6 haplotype from the noncoding region as candidates in two families.", "journal": "Journal of genetics", "date": "2018", "authors": "Kumari PK, Ali A, Singh SK, Chaurasia A, Raman R", "evidence": [ { "database": "RefSeq", "id": "NP_001185475", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185475" } ], "reference": [ { "type": "PubMed", "id": "29666346", "url": "https://glygen.org/publication/PubMed/29666346" } ] }, { "title": "Cancer Testis Antigen, NOL4, Is an Immunogenic Antigen Specifically Expressed in Small-Cell Lung Cancer.", "journal": "Current oncology (Toronto, Ont.)", "date": "2021", "authors": "Kim YR, Kim KU, Lee JH, Kim DW, Chung JH, Kim YD, Shin DH, Lee MK, Shin YI, Lee SY", "evidence": [ { "database": "RefSeq", "id": "NP_001185475", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185475" } ], "reference": [ { "type": "PubMed", "id": "34065612", "url": "https://glygen.org/publication/PubMed/34065612" } ] }, { "title": "NOL4 is a novel nuclear marker of small cell carcinoma and other neuroendocrine neoplasms.", "journal": "Histology and histopathology", "date": "2022-11", "authors": "Lee Jung Hee, Shin Dong Hoon, Lee Sang Yull, Park Jun Young, Kim So Young, Hwang Chung Su, Lee Hyun Jung, Na Joo Young, Kim Jee Yeon", "evidence": [ { "database": "RefSeq", "id": "NP_001185475", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185475" } ], "reference": [ { "type": "PubMed", "id": "36282054", "url": "https://glygen.org/publication/PubMed/36282054" } ] }, { "title": "Genome-wide association study of age at menarche in the Taiwan Biobank suggests NOL4 as a novel associated gene.", "journal": "Journal of human genetics", "date": "2023-01-30", "authors": "Tsai Meng-Che, Hsu Chih-Hui, Chu Shih-Kai, Roy-Gagnon Marie-H\u00e9l\u00e8ne, Lin Sheng-Hsiang", "evidence": [ { "database": "RefSeq", "id": "NP_001185475", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185475" } ], "reference": [ { "type": "PubMed", "id": "36710296", "url": "https://glygen.org/publication/PubMed/36710296" } ] }, { "title": "NOLP: identification of a novel human nucleolar protein and determination of sequence requirements for its nucleolar localization.", "journal": "Biochem. Biophys. Res. Commun.", "date": "1998", "authors": "Ueki N, Kondo M, Seki N, Yano K, Oda T, Masuho Y, Muramatsu M", "evidence": [ { "database": "UniProtKB", "id": "O94818", "url": "https://www.uniprot.org/uniprot/O94818" } ], "reference": [ { "type": "PubMed", "id": "9813152", "url": "https://glygen.org/publication/PubMed/9813152" } ] }, { "title": "Selection system for genes encoding nuclear-targeted proteins.", "journal": "Nat. Biotechnol.", "date": "1998", "authors": "Ueki N, Oda T, Kondo M, Yano K, Noguchi T, Muramatsu M", "evidence": [ { "database": "UniProtKB", "id": "O94818", "url": "https://www.uniprot.org/uniprot/O94818" } ], "reference": [ { "type": "PubMed", "id": "9853615", "url": "https://glygen.org/publication/PubMed/9853615" } ] } ], "pathway": [ { "id": "hsa:8715", "name": "", "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+hsa:8715", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A3P4-1", "protein_name": "Nucleolar protein 4", "gene_name": "Nol4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MESERDMYRQFQDWCLRTYGDSGKTKTVTRKKYERIVQLLNGSESSSTDNAKFKFWVKSKGFQLGQPDEVRGGGGGAKQVLFVRVKTTDGVGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAISESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERVQSPQTAQGQQDDDSAAESSNGNETLGHSSVASGGAHGREPGDSSSDGKTGLEQEEQPLNLSDSPRSAQLTSEYRVEDQGSNGKNKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNEGVDRGAEDLSLSRGDEDEDEHDEHEDSEKVNESDGVEAERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQFPEYQERARKRIRTYLKSCRRMKRSGFEMSRPIPSHLTSAVAESILASACESESRNAAKRMRLDKTQDEATPADKQCKPEAAQATYSTSTVPGSQEVLYINGNGTYSYHSYRGLGGGLLNLNDTSSSGPTDLSMKRQLAPGSGSSSSSNPRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN", "length": 638 }, "evidence": [ { "id": "O94818", "url": "https://omabrowser.org/oma/group/O94818/", "database": "OMA" } ], "common_name": "Rat" }, { "uniprot_canonical_ac": "P60954-1", "protein_name": "Nucleolar protein 4", "gene_name": "Nol4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESERDMYRQFQDWCLRTYGDSGKTKTVTRKKYERIVQLLNGSESSSTDNAKFKFWVKSKGFQLGQPDEVRGGGGGAKQVLFVRVKTTDGVGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAISESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERMQSPQTVHGQQDDDSAAESSNGNETLGHSSAASGGAHGREPEDSSSDGKTGLEQEEQPLNLSDSPSSAQLTSEFRIDDQGSDGKNKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDEHDEHEDSEKVNETDGVEAERLKAFNSRPIPSHLTSAVAESILASACESESRNAAKRMRLDKAQDEAAPADKQCKPEAAQATYSTATVPGSQEDPQI", "length": 483 }, "evidence": [ { "id": "45935102", "url": "http://www.informatics.jax.org/homology/45935102", "database": "MGI" } ], "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "O94818", "url": "https://www.uniprot.org/uniprot/O94818" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "O94818", "url": "https://www.uniprot.org/uniprot/O94818" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 268, "end_pos": 270, "annotation": "n_glycosylation_sequon" }, { "start_pos": 305, "end_pos": 307, "annotation": "n_glycosylation_sequon" }, { "start_pos": 349, "end_pos": 351, "annotation": "n_glycosylation_sequon" }, { "start_pos": 366, "end_pos": 368, "annotation": "n_glycosylation_sequon" }, { "start_pos": 398, "end_pos": 400, "annotation": "n_glycosylation_sequon" }, { "start_pos": 41, "end_pos": 43, "annotation": "n_glycosylation_sequon" }, { "start_pos": 550, "end_pos": 552, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "synthesized_glycans": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" }, { "name": "homologset.mgi", "label": "MGI Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [ 114, 317, 478, 509, 625 ], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 268, "end_pos": 270 }, { "start_pos": 305, "end_pos": 307 }, { "start_pos": 349, "end_pos": 351 }, { "start_pos": 366, "end_pos": 368 }, { "start_pos": 398, "end_pos": 400 }, { "start_pos": 41, "end_pos": 43 }, { "start_pos": 550, "end_pos": 552 } ] }, "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 5 }, { "field": "total_sites", "count": 5 } ], "sort_fields": [ "start_pos", "end_pos", "subjects_tested", "subjects_positive", "frequency", "sequence_org", "sequence_mut", "comment", "chr_id", "chr_pos", "ref_nt", "alt_nt", "minor_allelic_frequency", "site_lbl" ] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 5 }, { "field": "total_sites", "count": 5 } ], "sort_fields": [ "start_pos", "end_pos", "subjects_tested", "subjects_positive", "frequency", "sequence_org", "sequence_mut", "comment", "chr_id", "chr_pos", "ref_nt", "alt_nt", "minor_allelic_frequency", "site_lbl" ] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }