{ "uniprot_canonical_ac": "C7G027-1", "uniprot_ac": "C7G027", "uniprot_id": "C7G027_DICDI", "mass": { "chemical_mass": 181055.0, "monoisotopic_mass": 181055.0 }, "refseq": { "ac": "XP_002649145", "name": "hypothetical protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002649145" }, "gene_names": [ { "name": "DDB_G0295771", "resource": "UniProtKB", "type": "synonym", "url": "https://www.uniprot.org/uniprot/C7G027", "id": "C7G027" } ], "protein_names": [ { "name": "Rho termination factor N-terminal domain-containing protein", "resource": "UniProtKB", "type": "recommended", "url": "", "id": "C7G027" }, { "name": "hypothetical protein", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002649145", "id": "XP_002649145" } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "C7G027", "url": "https://www.uniprot.org/uniprot/C7G027" } ], "common_name": "Cellular slime molds" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprot/C7G027", "locus": {} } ], "crossref": [ { "id": "DDB_G0295771", "url": "http://dictybase.org/gene/DDB_G0295771", "database": "dictyBase", "categories": [ "Organism-specific" ] }, { "id": "8623592", "url": "https://www.ncbi.nlm.nih.gov/gene/8623592", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ddi:DDB_G0295771", "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+ddi:DDB_G0295771", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR32488", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32488", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32488:SF77", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32488:SF77", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "XP_002649145", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002649145", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "C7G027", "url": "https://www.uniprot.org/uniprot/C7G027", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "C7G027-1", "url": "https://www.uniprot.org/uniprot/C7G027-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSIFISHVFLENNTYLIQPHTTHTKHTHNINKKKKKKKKLEFQITPNQPTESPTDTKTLPPQPSTQSSSPIIQPIQSFQYNQNQQTQQTQQQQLHNDNSLLNLISNFLNSVPLPISNGLPYNQYHLYFIEKIVEMWIQIKITTSPGWSPSIIQFEKSNLLNACKNVLFNYPDVINRFISQRYSSEIDYLNSKLKETLNIINNQNQNHNNNNNNNFDDNQQKSEPSSPSVLPTPIESSTQYYRHEYNRIQSNYITVFEQFQQFSFYSPTSNYTISSTSSSSRTISPQPFLNNSCLNDNSTLNSENVNNNNNNNNNNNYNNNYNNNNYNSNSNNNNSNYNNSFINNNNINNYKLENNQPRAKRAYDKKKIKEEIENSSDEKKKKNFEIKGENEILEKIDINTLEKKPYQDIYRVAKSLGVPRCKKEELIQKIKYLICKNKLINNNINNNNNNNNNNNNNNNNNNNNNNNNNNKNDNKKVDNQLVNTSKQSQLQPIPPQPPQPQPPPQPQLQLQLQQKQYKDQIKRNNNHQQILIRQRNSNLHNPTKNLPISNISKNESLWWLVFKNREINSRIFSFMQVEAHNYHELNRVEWMIVNNHKQLLIDKVLKNQYLIFPQASNFNDIFSMIFKFINQDNNNSNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNSIDYKVFYKSLFKNYSNYIQNINTKAFYALQFKNLMAVQVLIEDYNFIPNIEMFNHFLKQSSFKVIQFLLKVLLQFQQQEQEQQQQQQQQQQQPNNTSIQLQKIFDKNEIWKHLYDQHINSLPVSSSTSSSSLPYSSTNLLSNSLISSMEIPTIKKRYKVINYLISTLELKSPILSRQQINNLFKICPIEQQFKLKHLIQSCNTIFNLKHSSNENSKSFLSSSTLSSSSSSSTSISTSIPIGINSFEDLQDIISQFNQDQLTIRLDEFENEFEKSLIQKMLLFFFNSNNQEKSLRYILHFQSDHYNSLDSIKQFESPSDILALEYGNFELLKRYFDYKIKNESLMIENLVHNNCFINNIIDYDGNAIDNISTDIGLPTTTTTKTTTTTMKYKLFKYCKSKEKQIKFLQDLINEIRVGNVNLKSKRISQQCLFSLVIGYDYLPFIQLVANELGQMMIPYIYDFNYNNYIRSPLVLSYIYSITIGTIHSTNIYNIIMYGNIELLEHLESLIPDNQFIEISHNKYSSIAQTLPLKSNERFSRTYKYIIGGNIIIDNFSSGDSSGDINTSGSSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDNDNNDKFTKRPNKYLYDSFLFDMVLKSIRINPTHSLKTDQQLIDIKFFIDNTTYDYNPFNPNDTVITLNQIKLFNWILTNRRSDLLQGGRCKLSKSQLTQYLYLSGNMNLIWNHCQSPINKHSTLATTFSPNSTLFFDNSDLLLRSIAVRSDVYTLSMIFDSFFKENYYPSKEEKSSILYLLSVAAQEGSIQIFEYLYLNHPLVLSKKSHKKSLASSWYLQSEIKNQVIFKALSKDHLELVLLLLENFEITPKQFLNNVIPNSICFSFLKDNYK", "length": 1552, "header": "tr|C7G027-1|C7G027_DICDI Isoform 1 of Rho termination factor N-terminal domain-containing protein OS=Dictyostelium discoideum OX=44689 GN= PE=4 SV=1 CANONICAL=C7G027-1" }, "isoforms": [ { "isoform_ac": "C7G027-1", "url": "", "sequence": { "sequence": "MSIFISHVFLENNTYLIQPHTTHTKHTHNINKKKKKKKKLEFQITPNQPTESPTDTKTLPPQPSTQSSSPIIQPIQSFQYNQNQQTQQTQQQQLHNDNSLLNLISNFLNSVPLPISNGLPYNQYHLYFIEKIVEMWIQIKITTSPGWSPSIIQFEKSNLLNACKNVLFNYPDVINRFISQRYSSEIDYLNSKLKETLNIINNQNQNHNNNNNNNFDDNQQKSEPSSPSVLPTPIESSTQYYRHEYNRIQSNYITVFEQFQQFSFYSPTSNYTISSTSSSSRTISPQPFLNNSCLNDNSTLNSENVNNNNNNNNNNNYNNNYNNNNYNSNSNNNNSNYNNSFINNNNINNYKLENNQPRAKRAYDKKKIKEEIENSSDEKKKKNFEIKGENEILEKIDINTLEKKPYQDIYRVAKSLGVPRCKKEELIQKIKYLICKNKLINNNINNNNNNNNNNNNNNNNNNNNNNNNNNKNDNKKVDNQLVNTSKQSQLQPIPPQPPQPQPPPQPQLQLQLQQKQYKDQIKRNNNHQQILIRQRNSNLHNPTKNLPISNISKNESLWWLVFKNREINSRIFSFMQVEAHNYHELNRVEWMIVNNHKQLLIDKVLKNQYLIFPQASNFNDIFSMIFKFINQDNNNSNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNSIDYKVFYKSLFKNYSNYIQNINTKAFYALQFKNLMAVQVLIEDYNFIPNIEMFNHFLKQSSFKVIQFLLKVLLQFQQQEQEQQQQQQQQQQQPNNTSIQLQKIFDKNEIWKHLYDQHINSLPVSSSTSSSSLPYSSTNLLSNSLISSMEIPTIKKRYKVINYLISTLELKSPILSRQQINNLFKICPIEQQFKLKHLIQSCNTIFNLKHSSNENSKSFLSSSTLSSSSSSSTSISTSIPIGINSFEDLQDIISQFNQDQLTIRLDEFENEFEKSLIQKMLLFFFNSNNQEKSLRYILHFQSDHYNSLDSIKQFESPSDILALEYGNFELLKRYFDYKIKNESLMIENLVHNNCFINNIIDYDGNAIDNISTDIGLPTTTTTKTTTTTMKYKLFKYCKSKEKQIKFLQDLINEIRVGNVNLKSKRISQQCLFSLVIGYDYLPFIQLVANELGQMMIPYIYDFNYNNYIRSPLVLSYIYSITIGTIHSTNIYNIIMYGNIELLEHLESLIPDNQFIEISHNKYSSIAQTLPLKSNERFSRTYKYIIGGNIIIDNFSSGDSSGDINTSGSSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDNDNNDKFTKRPNKYLYDSFLFDMVLKSIRINPTHSLKTDQQLIDIKFFIDNTTYDYNPFNPNDTVITLNQIKLFNWILTNRRSDLLQGGRCKLSKSQLTQYLYLSGNMNLIWNHCQSPINKHSTLATTFSPNSTLFFDNSDLLLRSIAVRSDVYTLSMIFDSFFKENYYPSKEEKSSILYLLSVAAQEGSIQIFEYLYLNHPLVLSKKSHKKSLASSWYLQSEIKNQVIFKALSKDHLELVLLLLENFEITPKQFLNNVIPNSICFSFLKDNYK", "length": 1552, "header": "tr|C7G027-1|C7G027_DICDI Isoform 1 of Rho termination factor N-terminal domain-containing protein OS=Dictyostelium discoideum OX=44689 GN= PE=4 SV=1 CANONICAL=C7G027-1" }, "locus": {} } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "The genome of the social amoeba Dictyostelium discoideum.", "journal": "Nature", "date": "2005", "authors": "Eichinger L, Pachebat J A, Gl\u00f6ckner G, Rajandream M-A, Sucgang R, Berriman M, Song J, Olsen R, Szafranski K, Xu Q, Tunggal B, Kummerfeld S, Madera M, Konfortov B A, Rivero F, Bankier A T, Lehmann R, Hamlin N, Davies R, Gaudet P, Fey P, Pilcher K, Chen G, Saunders D, Sodergren E, Davis P, Kerhornou A, Nie X, Hall N, Anjard C, Hemphill L, Bason N, Farbrother P, Desany B, Just E, Morio T, Rost R, Churcher C, Cooper J, Haydock S, van Driessche N, Cronin A, Goodhead I, Muzny D, Mourier T, Pain A, Lu M, Harper D, Lindsay R, Hauser H, James K, Quiles M, Madan Babu M, Saito T, Buchrieser C, Wardroper A, Felder M, Thangavelu M, Johnson D, Knights A, Loulseged H, Mungall K, Oliver K, Price C, Quail M A, Urushihara H, Hernandez J, Rabbinowitsch E, Steffen D, Sanders M, Ma J, Kohara Y, Sharp S, Simmonds M, Spiegler S, Tivey A, Sugano S, White B, Walker D, Woodward J, Winckler T, Tanaka Y, Shaulsky G, Schleicher M, Weinstock G, Rosenthal A, Cox E C, Chisholm R L, Gibbs R, Loomis W F, Platzer M, Kay R R, Williams J, Dear P H, Noegel A A, Barrell B, Kuspa A", "evidence": [ { "database": "UniProtKB", "id": "C7G027", "url": "https://www.uniprot.org/uniprot/C7G027" } ], "reference": [ { "type": "PubMed", "id": "15875012", "url": "https://glygen.org/publication/PubMed/15875012" } ] } ], "pathway": [ { "id": "ddi:DDB_G0295771", "name": "", "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+ddi:DDB_G0295771", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 1007, "end_pos": 1009, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1035, "end_pos": 1037, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1219, "end_pos": 1221, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1230, "end_pos": 1232, "annotation": "n_glycosylation_sequon" }, { "start_pos": 12, "end_pos": 14, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1329, "end_pos": 1331, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1340, "end_pos": 1342, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1410, "end_pos": 1412, "annotation": "n_glycosylation_sequon" }, { "start_pos": 270, "end_pos": 272, "annotation": "n_glycosylation_sequon" }, { "start_pos": 290, "end_pos": 292, "annotation": "n_glycosylation_sequon" }, { "start_pos": 297, "end_pos": 299, "annotation": "n_glycosylation_sequon" }, { "start_pos": 333, "end_pos": 335, "annotation": "n_glycosylation_sequon" }, { "start_pos": 338, "end_pos": 340, "annotation": "n_glycosylation_sequon" }, { "start_pos": 374, "end_pos": 376, "annotation": "n_glycosylation_sequon" }, { "start_pos": 483, "end_pos": 485, "annotation": "n_glycosylation_sequon" }, { "start_pos": 550, "end_pos": 552, "annotation": "n_glycosylation_sequon" }, { "start_pos": 554, "end_pos": 556, "annotation": "n_glycosylation_sequon" }, { "start_pos": 634, "end_pos": 636, "annotation": "n_glycosylation_sequon" }, { "start_pos": 655, "end_pos": 657, "annotation": "n_glycosylation_sequon" }, { "start_pos": 665, "end_pos": 667, "annotation": "n_glycosylation_sequon" }, { "start_pos": 680, "end_pos": 682, "annotation": "n_glycosylation_sequon" }, { "start_pos": 761, "end_pos": 763, "annotation": "n_glycosylation_sequon" }, { "start_pos": 762, "end_pos": 764, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "synthesized_glycans": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1007, "end_pos": 1009 }, { "start_pos": 1035, "end_pos": 1037 }, { "start_pos": 1219, "end_pos": 1221 }, { "start_pos": 1230, "end_pos": 1232 }, { "start_pos": 12, "end_pos": 14 }, { "start_pos": 1329, "end_pos": 1331 }, { "start_pos": 1340, "end_pos": 1342 }, { "start_pos": 1410, "end_pos": 1412 }, { "start_pos": 270, "end_pos": 272 }, { "start_pos": 290, "end_pos": 292 }, { "start_pos": 297, "end_pos": 299 }, { "start_pos": 333, "end_pos": 335 }, { "start_pos": 338, "end_pos": 340 }, { "start_pos": 374, "end_pos": 376 }, { "start_pos": 483, "end_pos": 485 }, { "start_pos": 550, "end_pos": 552 }, { "start_pos": 554, "end_pos": 556 }, { "start_pos": 634, "end_pos": 636 }, { "start_pos": 655, "end_pos": 657 }, { "start_pos": 665, "end_pos": 667 }, { "start_pos": 680, "end_pos": 682 }, { "start_pos": 761, "end_pos": 763 }, { "start_pos": 762, "end_pos": 764 } ] }, "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }