{ "uniprot_canonical_ac": "A0A286ZPJ4-1", "uniprot_ac": "A0A286ZPJ4", "uniprot_id": "A0A286ZPJ4_PIG", "mass": { "chemical_mass": 63087.0, "monoisotopic_mass": 63087.0 }, "refseq": {}, "gene_names": [ { "name": "CCDC85A", "resource": "UniProtKB", "type": "recommended", "url": "https://www.uniprot.org/uniprot/A0A286ZPJ4", "id": "A0A286ZPJ4" } ], "protein_names": [ { "name": "Coiled-coil domain containing 85A", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "A0A286ZPJ4" } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZPJ4", "url": "https://www.uniprot.org/uniprot/A0A286ZPJ4" } ], "common_name": "Pig" } ], "gene": [ { "name": "CCDC85A", "url": "https://www.uniprot.org/uniprot/A0A286ZPJ4", "locus": { "chromosome": "LUXU01063891.1", "start_pos": 411921, "end_pos": 618239, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00055024439", "url": "https://www.ensembl.org/id/ENSSSCG00055024439" } ] } } ], "crossref": [ { "id": "ENSSSCG00000008396", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008396", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100511688", "url": "https://www.ncbi.nlm.nih.gov/gene/100511688", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR019359", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019359", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "2906005at2759", "url": "http://www.orthodb.org/?query=2906005at2759", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13546", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13546", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13546:SF12", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13546:SF12", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13546:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13546:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10226", "url": "http://pfam.xfam.org/family/PF10226", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZPJ4", "url": "https://www.uniprot.org/uniprot/A0A286ZPJ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZPJ4-1", "url": "https://www.uniprot.org/uniprot/A0A286ZPJ4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZUX7", "url": "https://www.uniprot.org/uniprot/A0A286ZUX7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZUX7-1", "url": "https://www.uniprot.org/uniprot/A0A286ZUX7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ALS1", "url": "https://www.uniprot.org/uniprot/A0A287ALS1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ALS1-1", "url": "https://www.uniprot.org/uniprot/A0A287ALS1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QF99", "url": "https://www.uniprot.org/uniprot/A0A5G2QF99", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QF99-1", "url": "https://www.uniprot.org/uniprot/A0A5G2QF99-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RBW1", "url": "https://www.uniprot.org/uniprot/A0A5G2RBW1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RBW1-1", "url": "https://www.uniprot.org/uniprot/A0A5G2RBW1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQL3", "url": "https://www.uniprot.org/uniprot/F1SQL3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQL3-1", "url": "https://www.uniprot.org/uniprot/F1SQL3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSKAAGGASAAAAESCPPTSAGQSAAAAVEDLSKVSDEELLQWSKEELIRCLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDINQKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQEEVVKENMELKELCVLLDEEKGAGCAGSRCSIDSQASLCQLTATSAPYVRDVGDGSSTSSTGSTDSPDHKHHASGGSPEHLQKPRGEGSPEHSKHRSTSPEHLQKPRAPGTPDHPKALKGPSPEHHKPLCKGSPEQQRHPHAGSSPETLPKHVLSGSPEHFQKHRPGGSPEHARHSGGSPEHLQKHALGGSLEHLPRARGTSPEHLKQHYGGSPDHKHVGGGGGGSGGGSREGTLRRQAQEDVSPHHRNVYSGMNESTLSYVRQLEARVRQLEEENRMLPQNRRQPPTRNSSNMEKGWGPRARRVLQWWQGCRGIGRCLPTLPGSFRLSSGADGSNSSPNSPASFSGHTTPSQQPEPVVHSLKVLDVQETIDRQQGKEYEHDLSETEKAIVREMCNVVWRKLGDAAGSCPGIRQHLSGNQYKGPM", "length": 576, "header": "tr|A0A286ZPJ4-1|A0A286ZPJ4_PIG Isoform 1 of Coiled-coil domain containing 85A OS=Sus scrofa OX=9823 GN=CCDC85A PE=3 SV=2 CANONICAL=A0A286ZPJ4-1" }, "isoforms": [ { "isoform_ac": "A0A286ZPJ4-1", "url": "", "sequence": { "sequence": "MSKAAGGASAAAAESCPPTSAGQSAAAAVEDLSKVSDEELLQWSKEELIRCLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDINQKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQEEVVKENMELKELCVLLDEEKGAGCAGSRCSIDSQASLCQLTATSAPYVRDVGDGSSTSSTGSTDSPDHKHHASGGSPEHLQKPRGEGSPEHSKHRSTSPEHLQKPRAPGTPDHPKALKGPSPEHHKPLCKGSPEQQRHPHAGSSPETLPKHVLSGSPEHFQKHRPGGSPEHARHSGGSPEHLQKHALGGSLEHLPRARGTSPEHLKQHYGGSPDHKHVGGGGGGSGGGSREGTLRRQAQEDVSPHHRNVYSGMNESTLSYVRQLEARVRQLEEENRMLPQNRRQPPTRNSSNMEKGWGPRARRVLQWWQGCRGIGRCLPTLPGSFRLSSGADGSNSSPNSPASFSGHTTPSQQPEPVVHSLKVLDVQETIDRQQGKEYEHDLSETEKAIVREMCNVVWRKLGDAAGSCPGIRQHLSGNQYKGPM", "length": 576, "header": "tr|A0A286ZPJ4-1|A0A286ZPJ4_PIG Isoform 1 of Coiled-coil domain containing 85A OS=Sus scrofa OX=9823 GN=CCDC85A PE=3 SV=2 CANONICAL=A0A286ZPJ4-1" }, "locus": { "chromosome": "3", "start_pos": 85164972, "end_pos": 84960110, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045506.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045506.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033397.2", "url": "https://www.ensembl.org/id/ENSSSCP00000033397.2" } ] } }, { "isoform_ac": "A0A286ZUX7-1", "url": "", "sequence": { "sequence": "MSKAAGGASAAAAESCPPTSAGQSAAAAVEDLSKVSDEELLQWSKEELIRCLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDINQKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQEEVVKENMELKELCVLLDEEKGAGCAGSRCSIDSQASLCQLTATSAPYVRDVGDGSSTSSTGSTDSPDHKHHASGGSPEHLQKPRGEGSPEHSKHRSTSPEHLQKPRAPGTPDHPKALKGPSPEHHKPLCKGSPEQQRHPHAGSSPETLPKHVLSGSPEHFQKHRPGGSPEHARHSGGSPEHLQKHALGGSLEHLPRARGTSPEHLKQHYGGSPDHKHVGGGGGGSGGGSREGTLRRQAQEDVSPHHRNVYSGMNESTLSYVRQLEARVRQLEEENRMLPQGSFRLSSGADGSNSSPNSPASFSGHTTPSQQPEPVVHSLKVVWRKLGDAAGSCPGIRQHLSGNQYKGPM", "length": 501, "header": "tr|A0A286ZUX7-1|A0A286ZUX7_PIG Computationally mapped isoform of Coiled-coil domain containing 85A OS=Sus scrofa OX=9823 GN=CCDC85A PE=3 SV=3 CANONICAL=A0A286ZPJ4-1" }, "locus": {} }, { "isoform_ac": "A0A287ALS1-1", "url": "", "sequence": { "sequence": "MSKAAGGASAAAAESCPPTSAGQSAAAAVEDLSKVSDEELLQWSKEELIRCLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDINQKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQEEVVKENMELKELCVLLDEEKGAGCAGSRCSIDSQASLCQLTATSAPYVRDVGDGSSTSSTGSTDSPDHKHHASGGSPEHLQKPRGEGSPEHSKHRSTSPEHLQKPRAPGTPDHPKALKGPSPEHHKPLCKGSPEQQRHPHAGSSPETLPKHVLSGSPEHFQKHRPGGSPEHARHSGGSPEHLQKHALGGSLEHLPRARGTSPEHLKQHYGGSPDHKHVGGGGGGSGGGSREGTLRRQAQEDVSPHHRNVYSGMNESTLSYVRQLEARVRQLEEENRMLPQNRRQPPTRNSSNMEKGWGPRARRVLQWWQGCRGIGRCLPTLPGSFRLSSGADGSNSSPNSPASFSGHTTPSQQPEPVVHSLKVVWRKLGDAAGSCPGIRQHLSGNQYKGPM", "length": 543, "header": "tr|A0A287ALS1-1|A0A287ALS1_PIG Computationally mapped isoform of Coiled-coil domain containing 85A OS=Sus scrofa OX=9823 GN=CCDC85A PE=3 SV=3 CANONICAL=A0A286ZPJ4-1" }, "locus": { "chromosome": "3", "start_pos": 85164972, "end_pos": 84960110, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050611.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050611.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000044844.3", "url": "https://www.ensembl.org/id/ENSSSCP00000044844.3" } ] } }, { "isoform_ac": "A0A5G2QF99-1", "url": "", "sequence": { "sequence": "MSKAAGGASAAAAESCPPTSAGQSAAAAVEDLSKVSDEELLQWSKEELIRCLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDINQKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQEEVVKENMELKELCVLLDEEKGAGCAGSRCSIDSQASLCQLTATSAPYVRDVGDGSSTSSTGSTDSPDHKHHASGGSPEHLQKPRGEGSPEHSKHRSTSPEHLQKPRAPGTPDHPKALKGPSPEHHKPLCKGSPEQQRHPHAGSSPETLPKHVLSGSPEHFQKHRPGGSPEHARHSGGSPEHLQKHALGGSLEHLPRARGTSPEHLKQHYGGSPDHKHVGGGGGGSGGGSREGTLRRQAQEDVSPHHRNVYSGMNESAGAGVEVGWGEEHTFVPQIMMCVSPPHLFQSIQLPVR", "length": 445, "header": "tr|A0A5G2QF99-1|A0A5G2QF99_PIG Computationally mapped isoform of Coiled-coil domain containing 85A OS=Sus scrofa OX=9823 GN=CCDC85A PE=3 SV=1 CANONICAL=A0A286ZPJ4-1" }, "locus": {} }, { "isoform_ac": "A0A5G2RBW1-1", "url": "", "sequence": { "sequence": "MSKAAGGASAAAAESCPPTSAGQSAAAAVEDLSKVSDEELLQWSKEELIRCLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDINQKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQEEVVKENMELKELCVLLDEEKGAGCAGSRCSIDSQASLCQLTATSAPYVRDVGDGSSTSSTGSTDSPDHKHHASGGSPEHLQKPRGEGSPEHSKHRSTSPEHLQKPRAPGTPDHPKALKGPSPEHHKPLCKGSPEQQRHPHAGSSPETLPKHVLSGSPEHFQKHRPGGSPEHARHSGGSPEHLQKHALGGSLEHLPRARGTSPEHLKQHYGGSPDHKHVGGGGGGSGGGSREGTLRRQAQEDVSPHHRNVYSGMNGGSVVWRKLGDAAGSCPGIRQHLSGNQYKGPM", "length": 438, "header": "tr|A0A5G2RBW1-1|A0A5G2RBW1_PIG Computationally mapped isoform of Coiled-coil domain containing 85A OS=Sus scrofa OX=9823 GN=CCDC85A PE=3 SV=1 CANONICAL=A0A286ZPJ4-1" }, "locus": {} }, { "isoform_ac": "F1SQL3-1", "url": "", "sequence": { "sequence": "MSKAAGGASAAAAESCPPTSAGQSAAAAVEDLSKVSDEELLQWSKEELIRCLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDINQKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQEEVVKENMELKELCVLLDEEKGAGCAGSRCSIDSQASLCQLTATSAPYVRDVGDGSSTSSTGSTDSPDHKHHASGGSPEHLQKPRGEGSPEHSKHRSTSPEHLQKPRAPGTPDHPKALKGPSPEHHKPLCKGSPEQQRHPHAGSSPETLPKHVLSGSPEHFQKHRPGGSPEHARHSGGSPEHLQKHALGGSLEHLPRARGTSPEHLKQHYGGSPDHKHVGGGGGGSGGGSREGTLRRQAQEDVSPHHRNVYSGMNESTLSYVRQLEARVRQLEEENRMLPQVVWRKLGDAAGSCPGIRQHLSGNQYKGPM", "length": 461, "header": "tr|F1SQL3-1|A0A286ZPJ4_PIG Computationally mapped isoform of Coiled-coil domain containing 85A OS=Sus scrofa OX=9823 GN=CCDC85A PE=3 SV=3 CANONICAL=A0A286ZPJ4-1" }, "locus": {} } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "adherens junction", "id": "GO:0005912", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005912", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZPJ4", "url": "https://www.uniprot.org/uniprot/A0A286ZPJ4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 406, "end_pos": 408, "annotation": "n_glycosylation_sequon" }, { "start_pos": 441, "end_pos": 443, "annotation": "n_glycosylation_sequon" }, { "start_pos": 487, "end_pos": 489, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "synthesized_glycans": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 406, "end_pos": 408 }, { "start_pos": 441, "end_pos": 443 }, { "start_pos": 487, "end_pos": 489 } ] }, "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] } ] }