{ "uniprot_canonical_ac": "A0A286ZP75-1", "uniprot_ac": "A0A286ZP75", "uniprot_id": "A0A286ZP75_PIG", "mass": { "chemical_mass": 133881.0, "monoisotopic_mass": 133881.0 }, "refseq": {}, "gene_names": [ { "name": "IGDCC4", "resource": "UniProtKB", "type": "recommended", "url": "https://www.uniprot.org/uniprot/A0A286ZP75", "id": "A0A286ZP75" } ], "protein_names": [ { "name": "Immunoglobulin superfamily DCC subclass member 4", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "A0A286ZP75" } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP75", "url": "https://www.uniprot.org/uniprot/A0A286ZP75" } ], "common_name": "Pig" } ], "gene": [ { "name": "IGDCC4", "url": "https://www.uniprot.org/uniprot/A0A286ZP75", "locus": { "chromosome": "1", "start_pos": 163396234, "end_pos": 163436063, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004931", "url": "https://www.ensembl.org/id/ENSSSCG00000004931" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004931", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004931", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00063", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00063", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR003598", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003598", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003599", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003599", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003961", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003961", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013098", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013098", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036116", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036116", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "5397809at2759", "url": "http://www.orthodb.org/?query=5397809at2759", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR44170", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44170", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44170:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44170:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00041", "url": "http://pfam.xfam.org/family/PF00041", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "PF07679", "url": "http://pfam.xfam.org/family/PF07679", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "PF13927", "url": "http://pfam.xfam.org/family/PF13927", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZP75", "url": "https://www.uniprot.org/uniprot/A0A286ZP75", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZP75-1", "url": "https://www.uniprot.org/uniprot/A0A286ZP75-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MARGDASRRGGLFALTFCLLAARGVQPLPQETTVSLSCGAGPLQVILAPEQATVLDCSLGAVAAGPPTSITWSKDGGPLPEHDHLRLLPNGSLWLSQLPAPDGSGEAALGASEVLEGSYSCLAHSPLGVVASQAAVVKLAMLSGFSLHPESQTVEENGTARFQCHVEGLPAPVITWEKDQVTVPEELRLITLPNGVLQILDVQEDDAGSYRCVATNSAHQHISQEALLRVVRRGSLLSTGVQDVVIVAAPENTTVVSGQSVVMECVASADPTPIVSWVRQDGKPISTDVIVLGRTNLLITSAQPRHSGVYVCRANKPRTRDFATAAAELRVLAAPAISQAPEALSRTRASTARFVCRASGEPRPALRWLHNGAPLRPNGRVKVQGGGSSLVITQIGLQDAGYYQCVAENNAGTACAAAPLAVVVREGLPSAPTRVTATPLSSSTVLVAWERPELHSEQIIGFSLHYQKARGMDSVEYQFAVNNDTTELQVRDLEPNTDYEFYVVAYSQLGASRTSTPALVHTLDDVPSAAPQLSLSSPNPSDIRVAWLPLPPSLSNGQVVKYKIEYGLGKEDQIFSTEVPGNETQFTLNSLQPNKVYRVRISAGTGAGFGAPSQWMQHRTPSTHNQSHVPFAPAELKVRARMESLVVSWQPPPHPAQISGYKLYWREVGTEEDEANGESAPGGRGDQAWDVGPVRLKKKVKQYELTQLVPGRLYEVKLVAFNKHEDGYAAVWKGKTEKAPTPDLPIQRGPPLPPAHVHAESNSSTSIWLRWKKPDFTTVKIVNYTVRFSPWGLRNASLVTYYTSSGEDILIGGLKPFTKYEFAVQSHGVDMDGPFGSVVERSTLPDRPSTPPSDLRLSPLTPSTVRLHWCPPTEPNGEIVEYLILYSNNHTQPEHQWTLLTTEGNIFSAEVHGLESDTRYFFKMGARTEVGPGPFSGLQDVITLQEKLSDSLDVHSVTGIIVGVCLGLLCLLACMCAGLRRSPHREALPGLSSTTTAGNPALYSRAHLGPPSPPTVHELESLVHPRPQEWSPPPSDIEDRAEVHSLMGGGSSDCRGHSKRKISWAHAGGPSWAGSWAGCELPQAGPMPSLTRALLPPAGTGQTLLLQALVYDAIKGNGRKKPPPACRNQVEAEVIVHSDFSASKGNPDLHLQDLEPEDPLPSEAPDLTSGVVDLGQGADWLDRELGGCEQAAPGPDRLTCLPEAASASCPYPDLQPSEALEEAHGNSCPPKAPCPPGASPGLPRAPVSSSA", "length": 1251, "header": "tr|A0A286ZP75-1|A0A286ZP75_PIG Isoform 1 of Immunoglobulin superfamily DCC subclass member 4 OS=Sus scrofa OX=9823 GN=IGDCC4 PE=4 SV=1 CANONICAL=A0A286ZP75-1" }, "isoforms": [ { "isoform_ac": "A0A286ZP75-1", "url": "", "sequence": { "sequence": "MARGDASRRGGLFALTFCLLAARGVQPLPQETTVSLSCGAGPLQVILAPEQATVLDCSLGAVAAGPPTSITWSKDGGPLPEHDHLRLLPNGSLWLSQLPAPDGSGEAALGASEVLEGSYSCLAHSPLGVVASQAAVVKLAMLSGFSLHPESQTVEENGTARFQCHVEGLPAPVITWEKDQVTVPEELRLITLPNGVLQILDVQEDDAGSYRCVATNSAHQHISQEALLRVVRRGSLLSTGVQDVVIVAAPENTTVVSGQSVVMECVASADPTPIVSWVRQDGKPISTDVIVLGRTNLLITSAQPRHSGVYVCRANKPRTRDFATAAAELRVLAAPAISQAPEALSRTRASTARFVCRASGEPRPALRWLHNGAPLRPNGRVKVQGGGSSLVITQIGLQDAGYYQCVAENNAGTACAAAPLAVVVREGLPSAPTRVTATPLSSSTVLVAWERPELHSEQIIGFSLHYQKARGMDSVEYQFAVNNDTTELQVRDLEPNTDYEFYVVAYSQLGASRTSTPALVHTLDDVPSAAPQLSLSSPNPSDIRVAWLPLPPSLSNGQVVKYKIEYGLGKEDQIFSTEVPGNETQFTLNSLQPNKVYRVRISAGTGAGFGAPSQWMQHRTPSTHNQSHVPFAPAELKVRARMESLVVSWQPPPHPAQISGYKLYWREVGTEEDEANGESAPGGRGDQAWDVGPVRLKKKVKQYELTQLVPGRLYEVKLVAFNKHEDGYAAVWKGKTEKAPTPDLPIQRGPPLPPAHVHAESNSSTSIWLRWKKPDFTTVKIVNYTVRFSPWGLRNASLVTYYTSSGEDILIGGLKPFTKYEFAVQSHGVDMDGPFGSVVERSTLPDRPSTPPSDLRLSPLTPSTVRLHWCPPTEPNGEIVEYLILYSNNHTQPEHQWTLLTTEGNIFSAEVHGLESDTRYFFKMGARTEVGPGPFSGLQDVITLQEKLSDSLDVHSVTGIIVGVCLGLLCLLACMCAGLRRSPHREALPGLSSTTTAGNPALYSRAHLGPPSPPTVHELESLVHPRPQEWSPPPSDIEDRAEVHSLMGGGSSDCRGHSKRKISWAHAGGPSWAGSWAGCELPQAGPMPSLTRALLPPAGTGQTLLLQALVYDAIKGNGRKKPPPACRNQVEAEVIVHSDFSASKGNPDLHLQDLEPEDPLPSEAPDLTSGVVDLGQGADWLDRELGGCEQAAPGPDRLTCLPEAASASCPYPDLQPSEALEEAHGNSCPPKAPCPPGASPGLPRAPVSSSA", "length": 1251, "header": "tr|A0A286ZP75-1|A0A286ZP75_PIG Isoform 1 of Immunoglobulin superfamily DCC subclass member 4 OS=Sus scrofa OX=9823 GN=IGDCC4 PE=4 SV=1 CANONICAL=A0A286ZP75-1" }, "locus": { "chromosome": "1", "start_pos": 163435837, "end_pos": 163398767, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052504.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052504.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033419.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033419.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 157, "end_pos": 159, "annotation": "n_glycosylation_sequon" }, { "start_pos": 252, "end_pos": 254, "annotation": "n_glycosylation_sequon" }, { "start_pos": 483, "end_pos": 485, "annotation": "n_glycosylation_sequon" }, { "start_pos": 582, "end_pos": 584, "annotation": "n_glycosylation_sequon" }, { "start_pos": 625, "end_pos": 627, "annotation": "n_glycosylation_sequon" }, { "start_pos": 762, "end_pos": 764, "annotation": "n_glycosylation_sequon" }, { "start_pos": 783, "end_pos": 785, "annotation": "n_glycosylation_sequon" }, { "start_pos": 795, "end_pos": 797, "annotation": "n_glycosylation_sequon" }, { "start_pos": 889, "end_pos": 891, "annotation": "n_glycosylation_sequon" }, { "start_pos": 90, "end_pos": 92, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "synthesized_glycans": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 157, "end_pos": 159 }, { "start_pos": 252, "end_pos": 254 }, { "start_pos": 483, "end_pos": 485 }, { "start_pos": 582, "end_pos": 584 }, { "start_pos": 625, "end_pos": 627 }, { "start_pos": 762, "end_pos": 764 }, { "start_pos": 783, "end_pos": 785 }, { "start_pos": 795, "end_pos": 797 }, { "start_pos": 889, "end_pos": 891 }, { "start_pos": 90, "end_pos": 92 } ] }, "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] } ] }