{ "glytoucan_ac": "G02474FD", "number_monosaccharides": 17, "number_monosaccharides_suffix": "", "mass": 3101.12, "mass_pme": 3843.95, "tool_support": { "gnome_glygen_oglycans": "no", "sandbox": "yes", "gnome_glygen": "yes", "gnome": "yes", "gnome_glycotree_oglycans": "no", "pdb": "yes", "gnome_glygen_nglycans": "yes", "gnome_glycotree_nglycans": "yes" }, "fully_determined": "yes", "missing_score": 0, "glycan_type": "Saccharide", "iupac": "beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->4)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)[beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->4)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->4)]-alpha-D-Manp-(1->3)[beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->4)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)-beta-D-GlcpNAc-(1->", "wurcs": "WURCS=2.0/4,17,16/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5]/1-1-2-3-1-4-1-4-1-4-1-4-3-1-4-1-4/a4-b1_b4-c1_c3-d1_c6-m1_d2-e1_d4-i1_e4-f1_f4-g1_g4-h1_i4-j1_j4-k1_k4-l1_m2-n1_n4-o1_o4-p1_p4-q1", "glycoct": "RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:b-dglc-HEX-1:5 11s:n-acetyl 12b:b-dgal-HEX-1:5 13b:b-dglc-HEX-1:5 14s:n-acetyl 15b:b-dgal-HEX-1:5 16b:b-dglc-HEX-1:5 17s:n-acetyl 18b:b-dgal-HEX-1:5 19b:a-dman-HEX-1:5 20b:b-dglc-HEX-1:5 21s:n-acetyl 22b:b-dgal-HEX-1:5 23b:b-dglc-HEX-1:5 24s:n-acetyl 25b:b-dgal-HEX-1:5 LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:9o(4+1)10d 10:10d(2+1)11n 11:10o(4+1)12d 12:6o(4+1)13d 13:13d(2+1)14n 14:13o(4+1)15d 15:15o(4+1)16d 16:16d(2+1)17n 17:16o(4+1)18d 18:5o(6+1)19d 19:19o(2+1)20d 20:20d(2+1)21n 21:20o(4+1)22d 22:22o(4+1)23d 23:23d(2+1)24n 24:23o(4+1)25d", "inchi": "InChI=1S/C118H196N8O86/c1-26(143)119-51-64(156)87(38(13-131)181-102(51)179)198-103-52(120-27(2)144)69(161)94(45(20-138)186-103)209-116-86(178)99(63(155)50(197-116)25-180-117-100(75(167)62(154)37(12-130)185-117)211-108-57(125-32(7)149)70(162)92(43(18-136)191-108)207-114-83(175)77(169)96(47(22-140)194-114)200-105-54(122-29(4)146)66(158)89(40(15-133)188-105)204-111-80(172)73(165)60(152)35(10-128)183-111)210-118-101(212-109-58(126-33(8)150)71(163)93(44(19-137)192-109)208-115-84(176)78(170)97(48(23-141)195-115)201-106-55(123-30(5)147)67(159)90(41(16-134)189-106)205-112-81(173)74(166)61(153)36(11-129)184-112)85(177)98(49(24-142)196-118)202-107-56(124-31(6)148)68(160)91(42(17-135)190-107)206-113-82(174)76(168)95(46(21-139)193-113)199-104-53(121-28(3)145)65(157)88(39(14-132)187-104)203-110-79(171)72(164)59(151)34(9-127)182-110/h34-118,127-142,151-179H,9-25H2,1-8H3,(H,119,143)(H,120,144)(H,121,145)(H,122,146)(H,123,147)(H,124,148)(H,125,149)(H,126,150)/t34-,35-,36-,37-,38-,39-,40-,41-,42-,43-,44-,45-,46-,47-,48-,49-,50-,51-,52-,53-,54-,55-,56-,57-,58-,59+,60+,61+,62-,63-,64-,65-,66-,67-,68-,69-,70-,71-,72+,73+,74+,75+,76-,77-,78-,79-,80-,81-,82-,83-,84-,85+,86+,87-,88-,89-,90-,91-,92-,93-,94-,95+,96+,97+,98-,99+,100+,101+,102-,103+,104+,105+,106+,107+,108+,109+,110+,111+,112+,113+,114+,115+,116+,117+,118-/m1/s1", "glycam": "DGalpb1-4DGlcpNAcb1-4DGalpb1-4DGlcpNAcb1-2[DGalpb1-4DGlcpNAcb1-4DGalpb1-4DGlcpNAcb1-4]DManpa1-3[DGalpb1-4DGlcpNAcb1-4DGalpb1-4DGlcpNAcb1-2DManpa1-6]DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-OH", "smiles_isomeric": "CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O[C@H]3[C@H]([C@H]([C@@H]([C@H](O3)CO[C@@H]4[C@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O[C@H]6[C@@H]([C@H]([C@H]([C@H](O6)CO)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O[C@H]8[C@@H]([C@H]([C@H]([C@H](O8)CO)O)O)O)O)NC(=O)C)O)O)O)NC(=O)C)O)O[C@@H]9[C@H]([C@H]([C@@H]([C@H](O9)CO)O[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO)O[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO)O)O)O)O)NC(=O)C)O)O)O)NC(=O)C)O)O[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO)O[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO)O)O)O)O)NC(=O)C)O)O)O)NC(=O)C)O)O)NC(=O)C)O", "inchi_key": { "key": "QYVXCKJAZMEXOU-YZILISHJSA-N", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/QYVXCKJAZMEXOU-YZILISHJSA-N" }, "byonic": "HexNAc(8)Hex(9) % 3101.12095704", "gwb": "freeEnd--1b1D-GlcNAc,p--4b1D-GlcNAc,p--4b1D-Man,p(--3a1D-Man,p(--2b1D-GlcNAc,p--4b1D-Gal,p--4b1D-GlcNAc,p--4b1D-Gal,p)--4b1D-GlcNAc,p--4b1D-Gal,p--4b1D-GlcNAc,p--4b1D-Gal,p)--6a1D-Man,p--2b1D-GlcNAc,p--4b1D-Gal,p--4b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,0,0,freeEnd", "species": [], "classification": [ { "type": { "name": "N-linked", "url": "" }, "subtype": { "name": "Complex", "url": "" } }, { "type": { "name": "N-linked", "url": "" }, "subtype": { "name": "Triantennary" } } ], "enzyme": [ { "uniprot_canonical_ac": "Q9DBE8-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Alpha-1,3/1,6-mannosyltransferase ALG2", "gene": "Alg2", "gene_link": "https://www.uniprot.org/uniprot/Q9DBE8", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "Q9H553-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Alpha-1,3/1,6-mannosyltransferase ALG2", "gene": "ALG2", "gene_link": "https://www.uniprot.org/uniprot/Q9H553", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "P26572-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase", "gene": "MGAT1", "gene_link": "https://www.uniprot.org/uniprot/P26572", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "P27808-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase", "gene": "Mgat1", "gene_link": "https://www.uniprot.org/uniprot/P27808", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "O60512-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene": "B4GALT3", "gene_link": "https://www.uniprot.org/uniprot/O60512", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "O60909-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene": "B4GALT2", "gene_link": "https://www.uniprot.org/uniprot/O60909", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "P15291-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene": "B4GALT1", "gene_link": "https://www.uniprot.org/uniprot/P15291", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "P15535-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene": "B4galt1", "gene_link": "https://www.uniprot.org/uniprot/P15535", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "Q91YY2-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene": "B4galt3", "gene_link": "https://www.uniprot.org/uniprot/Q91YY2", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "Q9Z2Y2-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene": "B4galt2", "gene_link": "https://www.uniprot.org/uniprot/Q9Z2Y2", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "Q10469-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase", "gene": "MGAT2", "gene_link": "https://www.uniprot.org/uniprot/Q10469", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "Q921V5-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase", "gene": "Mgat2", "gene_link": "https://www.uniprot.org/uniprot/Q921V5", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "Q812F8-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B", "gene": "Mgat4b", "gene_link": "https://www.uniprot.org/uniprot/Q812F8", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "Q812G0-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A", "gene": "Mgat4a", "gene_link": "https://www.uniprot.org/uniprot/Q812G0", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "Q9D306-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C", "gene": "Mgat4c", "gene_link": "https://www.uniprot.org/uniprot/Q9D306", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "Q9UBM8-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C", "gene": "MGAT4C", "gene_link": "https://www.uniprot.org/uniprot/Q9UBM8", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "Q9UM21-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A", "gene": "MGAT4A", "gene_link": "https://www.uniprot.org/uniprot/Q9UM21", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "Q9UQ53-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B", "gene": "MGAT4B", "gene_link": "https://www.uniprot.org/uniprot/Q9UQ53", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "P42867-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase", "gene": "Dpagt1", "gene_link": "https://www.uniprot.org/uniprot/P42867", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "Q9H3H5-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase", "gene": "DPAGT1", "gene_link": "https://www.uniprot.org/uniprot/Q9H3H5", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "Q8BML3-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase", "gene": "Glt28d2", "gene_link": "https://www.uniprot.org/uniprot/Q8BML3", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "Q96F25-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "UDP-N-acetylglucosamine transferase subunit ALG14 homolog", "gene": "ALG14", "gene_link": "https://www.uniprot.org/uniprot/Q96F25", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "Q9D081-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "UDP-N-acetylglucosamine transferase subunit ALG14 homolog", "gene": "Alg14", "gene_link": "https://www.uniprot.org/uniprot/Q9D081", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "Q9D8C3-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13", "gene": "Alg13", "gene_link": "https://www.uniprot.org/uniprot/Q9D8C3", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "Q9NP73-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13", "gene": "ALG13", "gene_link": "https://www.uniprot.org/uniprot/Q9NP73", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "Q921Q3-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Chitobiosyldiphosphodolichol beta-mannosyltransferase", "gene": "Alg1", "gene_link": "https://www.uniprot.org/uniprot/Q921Q3", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] }, { "uniprot_canonical_ac": "Q9BT22-1", "xref_key": "glycan_xref_sandbox", "xref_id": "G02474FD", "protein_name": "Chitobiosyldiphosphodolichol beta-mannosyltransferase", "gene": "ALG1", "gene_link": "https://www.uniprot.org/uniprot/Q9BT22", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "G02474FD", "database": "SandBox", "url": "https://sandbox.glyomics.org/explore.html?G02474FD" } ] } ], "crossref": [ { "id": "91851621", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/91851621", "database": "PubChem Compound", "categories": [ "Chemical" ] }, { "id": "252283677", "url": "https://pubchem.ncbi.nlm.nih.gov/substance/252283677", "database": "PubChem Substance", "categories": [ "Chemical" ] }, { "id": "146682", "url": "https://www.ebi.ac.uk/chebi/searchId.do?chebiId=146682", "database": "ChEBI", "categories": [ "Chemical" ] }, { "id": "G02474FD", "url": "https://glytoucan.org/Structures/Glycans/G02474FD", "database": "GlyTouCan", "categories": [ "Glycan" ] }, { "id": "G02474FD", "url": "https://sandbox.glyomics.org/explore.html?G02474FD", "database": "SandBox", "categories": [ "Enzyme and Pathway" ] }, { "id": "G02474FD", "url": "https://gnome.glyomics.org/restrictions/GlyGen.StructureBrowser.html?focus=G02474FD", "database": "GNOme", "categories": [ "Glycan", "Ontology and Dictionary" ] }, { "id": "G02474FD", "url": "https://glycosmos.org/glycans/show/G02474FD", "database": "GlyCosmos", "categories": [ "Glycan", "Glycoproteomics" ] } ], "glycoprotein": [], "publication": [], "residues": [ { "id": "N1", "name": "N-glycan_a-D-Manp_1", "attachedby": "rxn.Q9DBE8-1", "detachedby": "", "parentid": "NC" }, { "id": "N1", "name": "N-glycan_a-D-Manp_1", "attachedby": "rxn.Q9H553-1", "detachedby": "", "parentid": "NC" }, { "id": "N2", "name": "N-glycan_b-D-GlcpNAc_2", "attachedby": "rxn.P26572-1", "detachedby": "", "parentid": "N1" }, { "id": "N2", "name": "N-glycan_b-D-GlcpNAc_2", "attachedby": "rxn.P27808-1", "detachedby": "", "parentid": "N1" }, { "id": "N3", "name": "N-glycan_b-D-Galp_3", "attachedby": "rxn.O60512-1", "detachedby": "", "parentid": "N2" }, { "id": "N3", "name": "N-glycan_b-D-Galp_3", "attachedby": "rxn.O60909-1", "detachedby": "", "parentid": "N2" }, { "id": "N3", "name": "N-glycan_b-D-Galp_3", "attachedby": "rxn.P15291-1", "detachedby": "", "parentid": "N2" }, { "id": "N3", "name": "N-glycan_b-D-Galp_3", "attachedby": "rxn.P15535-1", "detachedby": "", "parentid": "N2" }, { "id": "N3", "name": "N-glycan_b-D-Galp_3", "attachedby": "rxn.Q91YY2-1", "detachedby": "", "parentid": "N2" }, { "id": "N3", "name": "N-glycan_b-D-Galp_3", "attachedby": "rxn.Q9Z2Y2-1", "detachedby": "", "parentid": "N2" }, { "id": "N4", "name": "N-glycan_a-D-Manp_4", "attachedby": "rxn.Q9DBE8-1", "detachedby": "", "parentid": "NC" }, { "id": "N4", "name": "N-glycan_a-D-Manp_4", "attachedby": "rxn.Q9H553-1", "detachedby": "", "parentid": "NC" }, { "id": "N5", "name": "N-glycan_b-D-GlcpNAc_5", "attachedby": "rxn.Q10469-1", "detachedby": "", "parentid": "N4" }, { "id": "N5", "name": "N-glycan_b-D-GlcpNAc_5", "attachedby": "rxn.Q921V5-1", "detachedby": "", "parentid": "N4" }, { "id": "N6", "name": "N-glycan_b-D-Galp_6", "attachedby": "rxn.O60512-1", "detachedby": "", "parentid": "N5" }, { "id": "N6", "name": "N-glycan_b-D-Galp_6", "attachedby": "rxn.O60909-1", "detachedby": "", "parentid": "N5" }, { "id": "N6", "name": "N-glycan_b-D-Galp_6", "attachedby": "rxn.P15291-1", "detachedby": "", "parentid": "N5" }, { "id": "N6", "name": "N-glycan_b-D-Galp_6", "attachedby": "rxn.P15535-1", "detachedby": "", "parentid": "N5" }, { "id": "N6", "name": "N-glycan_b-D-Galp_6", "attachedby": "rxn.Q91YY2-1", "detachedby": "", "parentid": "N5" }, { "id": "N6", "name": "N-glycan_b-D-Galp_6", "attachedby": "rxn.Q9Z2Y2-1", "detachedby": "", "parentid": "N5" }, { "id": "N7", "name": "N-glycan_b-D-GlcpNAc_7", "attachedby": "rxn.Q812F8-1", "detachedby": "", "parentid": "N1" }, { "id": "N7", "name": "N-glycan_b-D-GlcpNAc_7", "attachedby": "rxn.Q812G0-1", "detachedby": "", "parentid": "N1" }, { "id": "N7", "name": "N-glycan_b-D-GlcpNAc_7", "attachedby": "rxn.Q9D306-1", "detachedby": "", "parentid": "N1" }, { "id": "N7", "name": "N-glycan_b-D-GlcpNAc_7", "attachedby": "rxn.Q9UBM8-1", "detachedby": "", "parentid": "N1" }, { "id": "N7", "name": "N-glycan_b-D-GlcpNAc_7", "attachedby": "rxn.Q9UM21-1", "detachedby": "", "parentid": "N1" }, { "id": "N7", "name": "N-glycan_b-D-GlcpNAc_7", "attachedby": "rxn.Q9UQ53-1", "detachedby": "", "parentid": "N1" }, { "id": "N8", "name": "N-glycan_b-D-Galp_8", "attachedby": "rxn.O60512-1", "detachedby": "", "parentid": "N7" }, { "id": "N8", "name": "N-glycan_b-D-Galp_8", "attachedby": "rxn.O60909-1", "detachedby": "", "parentid": "N7" }, { "id": "N8", "name": "N-glycan_b-D-Galp_8", "attachedby": "rxn.P15291-1", "detachedby": "", "parentid": "N7" }, { "id": "N8", "name": "N-glycan_b-D-Galp_8", "attachedby": "rxn.P15535-1", "detachedby": "", "parentid": "N7" }, { "id": "N8", "name": "N-glycan_b-D-Galp_8", "attachedby": "rxn.Q91YY2-1", "detachedby": "", "parentid": "N7" }, { "id": "N8", "name": "N-glycan_b-D-Galp_8", "attachedby": "rxn.Q9Z2Y2-1", "detachedby": "", "parentid": "N7" }, { "id": "NA", "name": "N-glycan_core_D-GlcNAc_A", "attachedby": "rxn.P42867-1", "detachedby": "", "parentid": "0" }, { "id": "NA", "name": "N-glycan_core_D-GlcNAc_A", "attachedby": "rxn.Q9H3H5-1", "detachedby": "", "parentid": "0" }, { "id": "NB", "name": "N-glycan_core_b-D-GlcpNAc_B", "attachedby": "rxn.Q8BML3-1", "detachedby": "", "parentid": "NA" }, { "id": "NB", "name": "N-glycan_core_b-D-GlcpNAc_B", "attachedby": "rxn.Q96F25-1", "detachedby": "", "parentid": "NA" }, { "id": "NB", "name": "N-glycan_core_b-D-GlcpNAc_B", "attachedby": "rxn.Q9D081-1", "detachedby": "", "parentid": "NA" }, { "id": "NB", "name": "N-glycan_core_b-D-GlcpNAc_B", "attachedby": "rxn.Q9D8C3-1", "detachedby": "", "parentid": "NA" }, { "id": "NB", "name": "N-glycan_core_b-D-GlcpNAc_B", "attachedby": "rxn.Q9NP73-1", "detachedby": "", "parentid": "NA" }, { "id": "NC", "name": "N-glycan_core_b-D-Manp_C", "attachedby": "rxn.Q921Q3-1", "detachedby": "", "parentid": "NB" }, { "id": "NC", "name": "N-glycan_core_b-D-Manp_C", "attachedby": "rxn.Q9BT22-1", "detachedby": "", "parentid": "NB" } ], "composition": [ { "name": "6-Deoxy-Hexose", "residue": "dhex", "count": 0, "cid": "840", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/840" }, { "name": "Hexose", "residue": "hex", "count": 9, "cid": "206", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/206" }, { "name": "N-Acetylhexosamine", "residue": "hexnac", "count": 8, "cid": "899", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/899" }, { "name": "Hexuronic Acid", "residue": "hexa", "count": 0, "cid": "610", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/610" }, { "name": "2-Amino-2-Deoxy-Hexose", "residue": "hexn", "count": 0, "cid": "739", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/739" }, { "name": "N-Acetyl-Neuraminic Acid", "residue": "neuac", "count": 0, "cid": "439197", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439197" }, { "name": "N-Glycolyl-Neuraminic Acid", "residue": "neugc", "count": 0, "cid": "440001", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/440001" }, { "name": "Phosphate", "residue": "p", "count": 0, "cid": "1061", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1061" }, { "name": "Pentose", "residue": "pent", "count": 0, "cid": "229", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/229" }, { "name": "Sulfate", "residue": "s", "count": 0, "cid": "1117", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1117" }, { "name": "Other", "residue": "other", "count": 0 } ], "composition_expanded": [ { "name": "Alditol", "residue": "aldi", "count": 0 }, { "name": "6-Deoxy-Hexose", "residue": "dhex", "count": 0, "cid": "840", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/840" }, { "name": "6-Deoxy-Hexitol", "residue": "dhex+aldi", "count": 0 }, { "name": "L-Fucose", "residue": "fuc", "count": 0, "cid": "17106", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/17106" }, { "name": "L-Fucitol", "residue": "fuc+aldi", "count": 0, "cid": "445724", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/445724" }, { "name": "D-Galactose", "residue": "gal", "count": 6, "cid": "6036", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/6036" }, { "name": "D-Galacitol", "residue": "gal+aldi", "count": 0, "cid": "11850", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/11850" }, { "name": "N-Acetyl-D-galactosamine", "residue": "galnac", "count": 0, "cid": "35717", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/35717" }, { "name": "N-Acetylgalactosaminitol", "residue": "galnac+aldi", "count": 0, "cid": "165880", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/165880" }, { "name": "D-Galacturonic Acid", "residue": "gala", "count": 0, "cid": "439215", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439215" }, { "name": "D-Glucose", "residue": "glc", "count": 0, "cid": "5793", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/5793" }, { "name": "D-Glucitol", "residue": "glc+aldi", "count": 0, "cid": "5780", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/5780" }, { "name": "D-Glucuronic acid", "residue": "glca", "count": 0, "cid": "94715", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/94715" }, { "name": "D-Glucosamine", "residue": "glcn", "count": 0, "cid": "439213", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439213" }, { "name": "N-Acetyl-D-Glucosamine", "residue": "glcnac", "count": 8, "cid": "439174", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439174" }, { "name": "N-Acetyl-D-glucosaminitol", "residue": "glcnac+aldi", "count": 0, "cid": "165206", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/165206" }, { "name": "Hexose", "residue": "hex", "count": 9, "cid": "206", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/206" }, { "name": "N-Acetylhexosamine", "residue": "hexnac", "count": 8, "cid": "899", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/899" }, { "name": "Hexuronic Acid", "residue": "hexa", "count": 0, "cid": "610", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/610" }, { "name": "2-Amino-2-Deoxy-Hexose", "residue": "hexn", "count": 0, "cid": "739", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/739" }, { "name": "Hexitol", "residue": "hex+aldi", "count": 0, "cid": "453", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/453" }, { "name": "N-Acetylhexosaminitol", "residue": "hexnac+aldi", "count": 0 }, { "name": "L-Iduronic acid", "residue": "idoa", "count": 0, "cid": "441039", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/441039" }, { "name": "D-Mannose", "residue": "man", "count": 3, "cid": "18950", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/18950" }, { "name": "D-Mannitol", "residue": "man+aldi", "count": 0, "cid": "6251", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/6251" }, { "name": "N-Acetyl-D-mannosamine", "residue": "mannac", "count": 0, "cid": "439281", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439281" }, { "name": "Methyl", "residue": "me", "count": 0 }, { "name": "N-Acetyl-Neuraminic Acid", "residue": "neuac", "count": 0, "cid": "439197", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439197" }, { "name": "N-Glycolyl-Neuraminic Acid", "residue": "neugc", "count": 0, "cid": "440001", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/440001" }, { "name": "Phosphate", "residue": "p", "count": 0, "cid": "1061", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1061" }, { "name": "Pentose", "residue": "pent", "count": 0, "cid": "229", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/229" }, { "name": "Sulfate", "residue": "s", "count": 0, "cid": "1117", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1117" }, { "name": "Sialic acid", "residue": "sia", "count": 0, "cid": "906", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/906" }, { "name": "Other", "residue": "other", "count": 0 }, { "name": "Floating substituent", "residue": "x", "count": 0 }, { "name": "D-Xylose", "residue": "xyl", "count": 0, "cid": "135191", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/135191" }, { "name": "Ketodeoxynononic acid", "residue": "kdn", "count": 0, "cid": "13991616", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/13991616" } ], "motifs": [ { "id": "GGM.000001", "name": "Type 2 LN", "synonym": "N-acetyllactosamine", "keywords": "LacNAc; N-acetyllactosamine; N-acetyllactosamine type 2" } ], "interactions": [], "expression": [], "subsumption": [ { "related_accession": "G14532BD", "relationship": "ancestor" }, { "related_accession": "G19972YZ", "relationship": "ancestor" }, { "related_accession": "G39471UU", "relationship": "ancestor" }, { "related_accession": "G64858OY", "relationship": "ancestor" }, { "related_accession": "G77923TL", "relationship": "ancestor" }, { "related_accession": "G88494BA", "relationship": "ancestor" }, { "related_accession": "G39471UU", "relationship": "basecomposition" }, { "related_accession": "G64858OY", "relationship": "composition" }, { "related_accession": "G14532BD", "relationship": "subsumedby" }, { "related_accession": "G14532BD", "relationship": "topology" } ], "names": [], "keywords": [ "fully_determined" ], "glycotree_pathways": [], "dictionary": {}, "biomarkers": [], "section_stats": [ { "table_id": "glycoprotein", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "expression", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "expression_tissue", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "expression_cell_line", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] } ] }