{ "bcoid": "GLY_000924", "title": "Pig Proteoform Glycosylation Citations (UniProtKB)", "description": "", "filename": "pig_proteoform_citations_glycosylation_sites_uniprotkb.csv", "filetype": "csv", "categories": { "species": [ "Homo sapiens" ], "molecule": [ "Proteoform" ], "tag": [ "Protein Citations UniProtKB" ], "file_type": [ "csv" ], "status": [ "Reviewed" ], "scope": [ "internal" ] }, "minitable": { "content": [ [ "P12021-1...", "Determinatio..." ], [ "Q8SPS7-1...", "Structure of..." ] ], "headers": [ "uniprotkb_ca...", "title..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "title" }, { "type": "string", "label": "journal_name" }, { "type": "string", "label": "publication_date" }, { "type": "string", "label": "authors" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "src_xref_key" }, { "type": "string", "label": "src_xref_id" }, { "type": "string", "label": "glytoucan_ac" } ], [ "P12021-1", "Determination of the site-specific O-glycosylation pattern of the porcine submaxillary mucin tandem repeat glycopeptide. Model proposed for the polypeptide:galnac transferase peptide binding site.", "The Journal of biological chemistry", "1997-04-11", "Gerken T A, Owens C L, Pasumarthy M", "protein_xref_pubmed", "9092502", "protein_xref_uniprotkb_gly", "P12021", "" ], [ "Q8SPS7-1", "Structure of the haptoglobin-haemoglobin complex.", "Nature", "2012 Sep 20", "Andersen CB, Torvund-Jensen M, Nielsen MJ, de Oliveira CL, Hersleth HP, Andersen NH, Pedersen JS, Andersen GR, Moestrup SK", "protein_xref_pubmed", "22922649", "protein_xref_uniprotkb_gly", "Q8SPS7", "" ], [ "Q07287-1", "Localization of carbohydrate chains of pig sperm ligand in the glycoprotein ZPB of egg zona pellucida.", "European journal of biochemistry", "1998-03-15", "Kudo K, Yonezawa N, Katsumata T, Aoki H, Nakano M", "protein_xref_pubmed", "9546665", "protein_xref_uniprotkb_gly", "Q07287", "" ], [ "P80015-1", "Strategies for determination of disulphide bridges in proteins using plasma desorption mass spectrometry.", "Biomedical & environmental mass spectrometry", "1990-11", "S\u00f8rensen H H, Thomsen J, Bayne S, H\u00f8jrup P, Roepstorff P", "protein_xref_pubmed", "2076469", "protein_xref_uniprotkb_gly", "P80015", "" ], [ "P15145-1", "Structural bases of coronavirus attachment to host aminopeptidase N and its inhibition by neutralizing antibodies.", "PLoS pathogens", "2012", "Reguera Juan, Santiago C\u00e9sar, Mudgal Gaurav, Ordo\u00f1o Desiderio, Enjuanes Luis, Casasnovas Jos\u00e9 M", "protein_xref_pubmed", "22876187", "protein_xref_uniprotkb_gly", "P15145", "" ], [ "Q28942-1", "Molecular cloning and identification of the porcine cytolytic trigger molecule G7 as a Fc gamma RIII alpha (CD16) homologue.", "Journal of immunology (Baltimore, Md. : 1950)", "1994-09-15", "Halloran P J, Sweeney S E, Strohmeier C M, Kim Y B", "protein_xref_pubmed", "8077673", "protein_xref_uniprotkb_gly", "Q28942", "" ], [ "P01224-1", "Porcine thyrotropin. The amino-acid sequence of the alpha and beta subunits.", "European journal of biochemistry", "1976-01-02", "Maghuin-Rogister G, Hennen G, Closset J, Kopeyan C", "protein_xref_pubmed", "1245181", "protein_xref_uniprotkb_gly", "P01224", "" ], [ "P01219-1", "The primary structure of the porcine luteinizing-hormone alpha-subunit.", "European journal of biochemistry", "1973-11-01", "Maghuin-Rogister G, Combarnous Y, Hennen G", "protein_xref_pubmed", "4770796", "protein_xref_uniprotkb_gly", "P01219", "" ], [ "Q95333-1", "Purification and amino acid sequence of aminopeptidase P from pig kidney.", "European journal of biochemistry", "1995-04-01", "Vergas Romero C, Neudorfer I, Mann K, Sch\u00e4fer W", "protein_xref_pubmed", "7744038", "protein_xref_uniprotkb_gly", "Q95333", "" ], [ "P22411-1", "The crystal structure of dipeptidyl peptidase IV (CD26) reveals its functional regulation and enzymatic mechanism.", "Proceedings of the National Academy of Sciences of the United States of America", "2003-04-29", "Engel Michael, Hoffmann Torsten, Wagner Leona, Wermann Michael, Heiser Ulrich, Kiefersauer Reiner, Huber Robert, Bode Wolfram, Demuth Hans-Ulrich, Brandstetter Hans", "protein_xref_pubmed", "12690074", "protein_xref_uniprotkb_gly", "P22411", "" ], [ "P81405-1", "Structure of the asparagine-linked sugar chains of porcine kidney and human urine cerebroside sulfate activator protein.", "Journal of mass spectrometry : JMS", "2000 Dec", "Faull KF, Johnson J, Kim MJ, To T, Whitelegge JP, Stevens RL, Fluharty CB, Fluharty AL", "protein_xref_pubmed", "11180632", "protein_xref_uniprotkb_gly", "P81405", "" ], [ "P02725-1", "Amino acid sequence and attachment sites of oligosaccharide units of porcine erythrocyte glycophorin.", "Journal of biochemistry", "1980-12", "Honma K, Tomita M, Hamada A", "protein_xref_pubmed", "7462200", "protein_xref_uniprotkb_gly", "P02725", "" ], [ "P09933-1", "Thyroid peroxidase glycosylation: the location and nature of the N-linked oligosaccharide units in porcine thyroid peroxidase.", "Archives of biochemistry and biophysics", "1992-09", "Rawitch A B, Pollock G, Yang S X, Taurog A", "protein_xref_pubmed", "1497352", "protein_xref_uniprotkb_gly", "P09933", "" ], [ "P42098-1", "Porcine oocyte zona pellucida M(r) 55,000 glycoproteins: identification of O-glycosylated domains.", "Molecular reproduction and development", "1992-10", "Yurewicz E C, Pack B A, Sacco A G", "protein_xref_pubmed", "1418987", "protein_xref_uniprotkb_gly", "P42098", "" ], [ "Q07287-1", "Porcine oocyte zona pellucida M(r) 55,000 glycoproteins: identification of O-glycosylated domains.", "Molecular reproduction and development", "1992-10", "Yurewicz E C, Pack B A, Sacco A G", "protein_xref_pubmed", "1418987", "protein_xref_uniprotkb_gly", "Q07287", "" ], [ "Q29011-1", "Hyaluronan-binding region of aggrecan from pig laryngeal cartilage. Amino acid sequence, analysis of N-linked oligosaccharides and location of the keratan sulphate.", "The Biochemical journal", "1992-09-15", "Barry F P, Gaw J U, Young C N, Neame P J", "protein_xref_pubmed", "1417734", "protein_xref_uniprotkb_gly", "Q29011", "" ], [ "P07200-1", "Latent TGF-\u03b2 structure and activation.", "Nature", "2011-06-15", "Shi Minlong, Zhu Jianghai, Wang Rui, Chen Xing, Mi Lizhi, Walz Thomas, Springer Timothy A", "protein_xref_pubmed", "21677751", "protein_xref_uniprotkb_gly", "P07200", "" ], [ "P35495-1", "Boar spermadhesin PSP-II: location of posttranslational modifications, heterodimer formation with PSP-I glycoforms and effect of dimerization on the ligand-binding capabilities of the subunits.", "FEBS letters", "1995-05-29", "Calvete J J, Mann K, Sch\u00e4fer W, Raida M, Sanz L, T\u00f6pfer-Petersen E", "protein_xref_pubmed", "7781775", "protein_xref_uniprotkb_gly", "P35495", "" ], [ "P01232-1", "Luteinizing hormone. The primary structures of the beta-subunit from bovine and porcine species.", "European journal of biochemistry", "1973-11-01", "Maghuin-Rogister G, Hennen G", "protein_xref_pubmed", "4770795", "protein_xref_uniprotkb_gly", "P01232", "" ], [ "P30034-1", "The complete primary structure of glycosylated porcine platelet factor 4.", "European journal of biochemistry", "1995-03-15", "Proudfoot A E, Magnenat E, Haley T M, Maione T E, Wells T N", "protein_xref_pubmed", "7737160", "protein_xref_uniprotkb_gly", "P30034", "" ], [ "P04366-1", "Complementary DNA and deduced amino acid sequences of procine alpha 1-microglobulin and bikunin.", "FEBS letters", "1990-08-20", "Gebhard W, Schreitm\u00fcller T, Vetr H, Wachter E, Hochstrasser K", "protein_xref_pubmed", "1696914", "protein_xref_uniprotkb_gly", "P04366", "" ], [ "P22412-1", "cDNA cloning and expression in Xenopus laevis oocytes of pig renal dipeptidase, a glycosyl-phosphatidylinositol-anchored ectoenzyme.", "The Biochemical journal", "1990-11-01", "Rached E, Hooper N M, James P, Semenza G, Turner A J, Mantei N", "protein_xref_pubmed", "2173907", "protein_xref_uniprotkb_gly", "P22412", "" ], [ "P81649-1", "Purification and primary structure of a porcine kidney non-secretory ribonuclease.", "Bioscience, biotechnology, and biochemistry", "1993-12", "Iwama M, Sanda A, Ohgi K, Hofsteenge J, Irie M", "protein_xref_pubmed", "7764367", "protein_xref_uniprotkb_gly", "P81649", "" ], [ "P11936-1", "Purification, characterization, and the complete amino acid sequence of porcine pancreatic deoxyribonuclease.", "The Journal of biological chemistry", "1986-12-05", "Paudel H K, Liao T H", "protein_xref_pubmed", "3782104", "protein_xref_uniprotkb_gly", "P11936", "" ], [ "Q8SPJ0-1", "Identification of a member of a new RNase a family specifically secreted by epididymal caput epithelium.", "Biology of reproduction", "2004 Feb", "Castella S, Fouchecourt S, Teixeira-Gomes AP, Vinh J, Belghazi M, Dacheux F, Dacheux JL", "protein_xref_pubmed", "14561640", "protein_xref_uniprotkb_gly", "Q8SPJ0", "" ], [ "P06867-1", "The N- and O-linked carbohydrate chains of human, bovine and porcine plasminogen. Species specificity in relation to sialylation and fucosylation patterns.", "European journal of biochemistry", "1988 Apr 5", "Marti T, Schaller J, Rickli EE, Schmid K, Kamerling JP, Gerwig GJ, van Halbeek H, Vliegenthart JF", "protein_xref_pubmed", "3356193", "protein_xref_uniprotkb_gly", "P06867", "" ], [ "Q29411-1", "In vitro expression of a 38,000 dalton heparin-binding glycoprotein by morphologically differentiated smooth muscle cells.", "Journal of cellular physiology", "1986-06", "Millis A J, Hoyle M, Kent L", "protein_xref_pubmed", "3086326", "protein_xref_uniprotkb_gly", "Q29411", "" ], [ "O97939-1", "Primary structure of the porcine 89-kDa enamelin.", "Advances in dental research", "1996-11", "Fukae M, Tanabe T, Murakami C, Dohi N, Uchida T, Shimizu M", "protein_xref_pubmed", "9206327", "protein_xref_uniprotkb_gly", "O97939", "" ], [ "P08001-1", "Complete localization of the disulfide bridges and glycosylation sites in boar sperm acrosin.", "FEBS letters", "1990-11-26", "T\u00f6pfer-Petersen E, Calvete J, Sch\u00e4fer W, Henschen A", "protein_xref_pubmed", "2261983", "protein_xref_uniprotkb_gly", "P08001", "" ], [ "P10669-1", "Molecular heterogeneity of follistatin, an activin-binding protein. Higher affinity of the carboxyl-terminal truncated forms for heparan sulfate proteoglycans on the ovarian granulosa cell.", "The Journal of biological chemistry", "1993-07-25", "Sugino K, Kurosawa N, Nakamura T, Takio K, Shimasaki S, Ling N, Titani K, Sugino H", "protein_xref_pubmed", "8340384", "protein_xref_uniprotkb_gly", "P10669", "" ], [ "P35496-1", "Boar spermadhesin PSP-II: location of posttranslational modifications, heterodimer formation with PSP-I glycoforms and effect of dimerization on the ligand-binding capabilities of the subunits.", "FEBS letters", "1995-05-29", "Calvete J J, Mann K, Sch\u00e4fer W, Raida M, Sanz L, T\u00f6pfer-Petersen E", "protein_xref_pubmed", "7781775", "protein_xref_uniprotkb_gly", "P35496", "" ], [ "O02839-1", "Purification and characterization of the pig analogue of human membrane cofactor protein (CD46/MCP).", "Journal of immunology (Baltimore, Md. : 1950)", "1997-02-15", "van den Berg C W, P\u00e9rez de la Lastra J M, Llanes D, Morgan B P", "protein_xref_pubmed", "9029106", "protein_xref_uniprotkb_gly", "O02839", "" ], [ "Q28989-1", "Splicing determines the glycosylation state of ameloblastin.", "Journal of dental research", "2007-10", "Kobayashi K, Yamakoshi Y, Hu J C-C, Gomi K, Arai T, Fukae M, Krebsbach P H, Simmer J P", "protein_xref_pubmed", "17890672", "protein_xref_uniprotkb_gly", "Q28989", "" ], [ "P00591-1", "Porcine pancreatic lipase. Sequence of the first 234 amino acids of the peptide chain.", "European journal of biochemistry", "1979-07", "Bianchetta J D, Bidaud J, Guidoni A A, Bonicel J J, Rovery M", "protein_xref_pubmed", "380992", "protein_xref_uniprotkb_gly", "P00591", "" ], [ "P16549-1", "N-Glycosylation of pig flavin-containing monooxygenase form 1: determination of the site of protein modification by mass spectrometry.", "Chemical research in toxicology", "1998-10", "Korsmeyer K K, Guan S, Yang Z C, Falick A M, Ziegler D M, Cashman J R", "protein_xref_pubmed", "9778310", "protein_xref_uniprotkb_gly", "P16549", "" ], [ "P81608-1", "Cloning, post-translational modifications, heterologous expression and ligand-binding of boar salivary lipocalin.", "The Biochemical journal", "2000-09-01", "Loebel D, Scaloni A, Paolini S, Fini C, Ferrara L, Breer H, Pelosi P", "protein_xref_pubmed", "10947950", "protein_xref_uniprotkb_gly", "P81608", "" ], [ "P81608-1", "Boar salivary lipocalin. Three-dimensional X-ray structure and androsterol/androstenone docking simulations.", "European journal of biochemistry", "2002-05", "Spinelli Silvia, Vincent Florence, Pelosi Paolo, Tegoni Mariella, Cambillau Christian", "protein_xref_pubmed", "12027882", "protein_xref_uniprotkb_gly", "P81608", "" ] ] }, "readme": "Name\n - Pig Proteoform Glycosylation Citations (UniProtKB)\n\nVersion\n - v-2.4.1\n\nCreated on\n - 2021-06-03T16:32:02.053252\n\nModified on\n - 2024-02-28T15:15:09\n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Jingyue Wu [jingyue.wu@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Jingyue Wu [jingyue.wu@email.gwu.edu]\n\nAuthors\n - \n\nChecksum\n - \n\nExecution Domain\n Scripts\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: pig_proteoform_glycosylation_sites_uniprotkb.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.4.1/reviewed/pig_proteoform_glycosylation_sites_uniprotkb.csv\n Output Subdomain\n Name: pig_proteoform_citations_glycosylation_sites_uniprotkb.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.4.1/reviewed/pig_proteoform_citations_glycosylation_sites_uniprotkb.csv\n Name: pig_proteoform_citations_glycosylation_sites_uniprotkb.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.4.1/reviewed/pig_proteoform_citations_glycosylation_sites_uniprotkb.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"35\"\n Name: \"title\"\n Description: \"Title of the published article in the journal\"\n Unique Values: \"35\"\n Name: \"journal_name\"\n Description: \"The name of the journal in which the article is published\"\n Unique Values: \"19\"\n Name: \"publication_date\"\n Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n Unique Values: \"34\"\n Name: \"authors\"\n Description: \"NA\"\n Unique Values: \"35\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"1\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"35\"\n Name: \"src_xref_key\"\n Description: \"Source Xref key\"\n Unique Values: \"1\"\n Name: \"src_xref_id\"\n Description: \"Source X-ref ID\"\n Unique Values: \"35\"\n Name: \"glytoucan_ac\"\n Description: \"Unique accession assigned to the registered glycan structure in GlyTouCan database\"\n Unique Values: \"1\"", "downloadurl": "/ln2data/releases/data/v-2.4.1/reviewed/pig_proteoform_citations_glycosylation_sites_uniprotkb.csv" }