{ "bcoid": "GLY_000724", "title": "Mouse Xref O-GlcNAcAtlas", "description": "Mouse Xref O-GlcNAcAtlas dataset contains mouse (taxid: 10090) UniProtKB canonical accessions mapped ...", "filename": "mouse_protein_xref_oglcnac_atlas.csv", "filetype": "csv", "categories": { "species": [ "Mus musculus" ], "molecule": [ "Protein" ], "tag": [ "O-GlcNAcAtlas Cross-references" ], "file_type": [ "csv" ], "status": [ "Reviewed" ], "scope": [ "internal" ] }, "minitable": { "content": [ [ "Q3URK3-1...", "protein_xref..." ], [ "O08915-1...", "protein_xref..." ] ], "headers": [ "uniprotkb_ca...", "xref_key..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "xref_label" } ], [ "Q3URK3-1", "protein_xref_oglcnac_atlas", "Q3URK3", "O-GlcNAc Atlas" ], [ "O08915-1", "protein_xref_oglcnac_atlas", "O08915", "O-GlcNAc Atlas" ], [ "Q80WC1-1", "protein_xref_oglcnac_atlas", "Q80WC1", "O-GlcNAc Atlas" ], [ "Q80WC7-1", "protein_xref_oglcnac_atlas", "Q80WC7", "O-GlcNAc Atlas" ], [ "F8VQK3-1", "protein_xref_oglcnac_atlas", "F8VQK3", "O-GlcNAc Atlas" ], [ "Q3U3I9-1", "protein_xref_oglcnac_atlas", "Q3U3I9", "O-GlcNAc Atlas" ], [ "E9Q2C0-1", "protein_xref_oglcnac_atlas", "E9Q2C0", "O-GlcNAc Atlas" ], [ "Q1HKZ5-1", "protein_xref_oglcnac_atlas", "Q1HKZ5", "O-GlcNAc Atlas" ], [ "E9PUL3-1", "protein_xref_oglcnac_atlas", "E9PUL3", "O-GlcNAc Atlas" ], [ "E9PUL5-1", "protein_xref_oglcnac_atlas", "E9PUL5", "O-GlcNAc Atlas" ], [ "O88307-1", "protein_xref_oglcnac_atlas", "O88307", "O-GlcNAc Atlas" ], [ "Q8BGH7-1", "protein_xref_oglcnac_atlas", "Q8BGH7", "O-GlcNAc Atlas" ], [ "P83093-1", "protein_xref_oglcnac_atlas", "P83093", "O-GlcNAc Atlas" ], [ "E9Q7E2-1", "protein_xref_oglcnac_atlas", "E9Q7E2", "O-GlcNAc Atlas" ], [ "O08919-1", "protein_xref_oglcnac_atlas", "O08919", "O-GlcNAc Atlas" ], [ "P43006-1", "protein_xref_oglcnac_atlas", "P43006", "O-GlcNAc Atlas" ], [ "Q9QZQ0-1", "protein_xref_oglcnac_atlas", "Q9QZQ0", "O-GlcNAc Atlas" ], [ "Q0VGY8-1", "protein_xref_oglcnac_atlas", "Q0VGY8", "O-GlcNAc Atlas" ], [ "Q5RJG7-1", "protein_xref_oglcnac_atlas", "Q5RJG7", "O-GlcNAc Atlas" ], [ "O88492-1", "protein_xref_oglcnac_atlas", "O88492", "O-GlcNAc Atlas" ], [ "O88495-1", "protein_xref_oglcnac_atlas", "O88495", "O-GlcNAc Atlas" ], [ "Q9EPK5-1", "protein_xref_oglcnac_atlas", "Q9EPK5", "O-GlcNAc Atlas" ], [ "Q8BUV3-1", "protein_xref_oglcnac_atlas", "Q8BUV3", "O-GlcNAc Atlas" ], [ "Q6ZPS6-1", "protein_xref_oglcnac_atlas", "Q6ZPS6", "O-GlcNAc Atlas" ], [ "O55028-1", "protein_xref_oglcnac_atlas", "O55028", "O-GlcNAc Atlas" ], [ "O54992-1", "protein_xref_oglcnac_atlas", "O54992", "O-GlcNAc Atlas" ], [ "Q7TQH0-1", "protein_xref_oglcnac_atlas", "Q7TQH0", "O-GlcNAc Atlas" ], [ "E9Q842-1", "protein_xref_oglcnac_atlas", "E9Q842", "O-GlcNAc Atlas" ], [ "Q8C170-1", "protein_xref_oglcnac_atlas", "Q8C170", "O-GlcNAc Atlas" ], [ "Q9CSH3-1", "protein_xref_oglcnac_atlas", "Q9CSH3", "O-GlcNAc Atlas" ], [ "Q76KF0-1", "protein_xref_oglcnac_atlas", "Q76KF0", "O-GlcNAc Atlas" ], [ "Q8R0X2-1", "protein_xref_oglcnac_atlas", "Q8R0X2", "O-GlcNAc Atlas" ], [ "Q9JL04-1", "protein_xref_oglcnac_atlas", "Q9JL04", "O-GlcNAc Atlas" ], [ "P86176-1", "protein_xref_oglcnac_atlas", "P86176", "O-GlcNAc Atlas" ], [ "P15105-1", "protein_xref_oglcnac_atlas", "P15105", "O-GlcNAc Atlas" ], [ "A0A1B0GSG7-1", "protein_xref_oglcnac_atlas", "A0A1B0GSG7", "O-GlcNAc Atlas" ], [ "Q7SIG6-1", "protein_xref_oglcnac_atlas", "Q7SIG6", "O-GlcNAc Atlas" ], [ "Q8R4X3-1", "protein_xref_oglcnac_atlas", "Q8R4X3", "O-GlcNAc Atlas" ], [ "Q640R3-1", "protein_xref_oglcnac_atlas", "Q640R3", "O-GlcNAc Atlas" ], [ "A2CI98-1", "protein_xref_oglcnac_atlas", "A2CI98", "O-GlcNAc Atlas" ], [ "Q62407-1", "protein_xref_oglcnac_atlas", "Q62407", "O-GlcNAc Atlas" ], [ "Q05D44-1", "protein_xref_oglcnac_atlas", "Q05D44", "O-GlcNAc Atlas" ], [ "P11499-1", "protein_xref_oglcnac_atlas", "P11499", "O-GlcNAc Atlas" ], [ "P48614-1", "protein_xref_oglcnac_atlas", "P48614", "O-GlcNAc Atlas" ], [ "P17427-1", "protein_xref_oglcnac_atlas", "P17427", "O-GlcNAc Atlas" ], [ "O08599-1", "protein_xref_oglcnac_atlas", "O08599", "O-GlcNAc Atlas" ], [ "Q8C790-1", "protein_xref_oglcnac_atlas", "Q8C790", "O-GlcNAc Atlas" ], [ "Q8BRT1-1", "protein_xref_oglcnac_atlas", "Q8BRT1", "O-GlcNAc Atlas" ], [ "Q99LI8-1", "protein_xref_oglcnac_atlas", "Q99LI8", "O-GlcNAc Atlas" ], [ "Q3UFS4-1", "protein_xref_oglcnac_atlas", "Q3UFS4", "O-GlcNAc Atlas" ], [ "Q9QXV8-1", "protein_xref_oglcnac_atlas", "Q9QXV8", "O-GlcNAc Atlas" ], [ "Q8CBR1-1", "protein_xref_oglcnac_atlas", "Q8CBR1", "O-GlcNAc Atlas" ], [ "Q3UYH7-1", "protein_xref_oglcnac_atlas", "Q3UYH7", "O-GlcNAc Atlas" ], [ "Q80YE7-1", "protein_xref_oglcnac_atlas", "Q80YE7", "O-GlcNAc Atlas" ], [ "Q8BSK8-1", "protein_xref_oglcnac_atlas", "Q8BSK8", "O-GlcNAc Atlas" ], [ "Q7TQ40-1", "protein_xref_oglcnac_atlas", "Q7TQ40", "O-GlcNAc Atlas" ], [ "O08709-1", "protein_xref_oglcnac_atlas", "O08709", "O-GlcNAc Atlas" ], [ "Q60677-1", "protein_xref_oglcnac_atlas", "Q60677", "O-GlcNAc Atlas" ], [ "P70365-1", "protein_xref_oglcnac_atlas", "P70365", "O-GlcNAc Atlas" ], [ "P12960-1", "protein_xref_oglcnac_atlas", "P12960", "O-GlcNAc Atlas" ], [ "P62192-1", "protein_xref_oglcnac_atlas", "P62192", "O-GlcNAc Atlas" ], [ "P62196-1", "protein_xref_oglcnac_atlas", "P62196", "O-GlcNAc Atlas" ], [ "P55937-2", "protein_xref_oglcnac_atlas", "P55937", "O-GlcNAc Atlas" ], [ "Q80X59-1", "protein_xref_oglcnac_atlas", "Q80X59", "O-GlcNAc Atlas" ], [ "Q80X50-1", "protein_xref_oglcnac_atlas", "Q80X50", "O-GlcNAc Atlas" ], [ "P51881-1", "protein_xref_oglcnac_atlas", "P51881", "O-GlcNAc Atlas" ], [ "P08414-1", "protein_xref_oglcnac_atlas", "P08414", "O-GlcNAc Atlas" ], [ "P97499-1", "protein_xref_oglcnac_atlas", "P97499", "O-GlcNAc Atlas" ], [ "Q8BXL9-1", "protein_xref_oglcnac_atlas", "Q8BXL9", "O-GlcNAc Atlas" ], [ "B1AXH1-1", "protein_xref_oglcnac_atlas", "B1AXH1", "O-GlcNAc Atlas" ], [ "O55111-1", "protein_xref_oglcnac_atlas", "O55111", "O-GlcNAc Atlas" ], [ "Q32P12-1", "protein_xref_oglcnac_atlas", "Q32P12", "O-GlcNAc Atlas" ], [ "E9Q7N9-1", "protein_xref_oglcnac_atlas", "E9Q7N9", "O-GlcNAc Atlas" ], [ "P97823-1", "protein_xref_oglcnac_atlas", "P97823", "O-GlcNAc Atlas" ], [ "P99027-1", "protein_xref_oglcnac_atlas", "P99027", "O-GlcNAc Atlas" ], [ "P83510-1", "protein_xref_oglcnac_atlas", "P83510", "O-GlcNAc Atlas" ], [ "Q9Z0I7-1", "protein_xref_oglcnac_atlas", "Q9Z0I7", "O-GlcNAc Atlas" ], [ "P70257-3", "protein_xref_oglcnac_atlas", "P70257", "O-GlcNAc Atlas" ], [ "Q61792-1", "protein_xref_oglcnac_atlas", "Q61792", "O-GlcNAc Atlas" ], [ "P68134-1", "protein_xref_oglcnac_atlas", "P68134", "O-GlcNAc Atlas" ], [ "O54949-1", "protein_xref_oglcnac_atlas", "O54949", "O-GlcNAc Atlas" ], [ "Q8BT14-1", "protein_xref_oglcnac_atlas", "Q8BT14", "O-GlcNAc Atlas" ], [ "Q8BPC6-1", "protein_xref_oglcnac_atlas", "Q8BPC6", "O-GlcNAc Atlas" ], [ "A2AN08-1", "protein_xref_oglcnac_atlas", "A2AN08", "O-GlcNAc Atlas" ] ] }, "readme": "Name\n - Mouse Xref O-GlcNAcAtlas\n\nVersion\n - v-2.4.1\n\nCreated on\n - \n\nModified on\n - \n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Jingyue Wu [jingyue.wu@email.gwu.edu]\n\nAuthors\n - \n\nChecksum\n - \n\nUsability Domain\n - Mouse Xref O-GlcNAcAtlas dataset contains mouse (taxid: 10090) UniProtKB canonical accessions mapped to the O-GlcNAcAtlas accessions.\n\nDescription Domain\n Keywords\n - Xref\n - O-GlcNAc\n - O-GlcNAc Atlas\n\n Pipeline Steps\n - Step-1: The script maps the UniProtKB accesions to the O-GlcNAcAtlas Database accessions\n\nExecution Domain\n Scripts - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: mouse_proteoform_glycosylation_sites_oglcnac_atlas.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.4.1/reviewed/mouse_proteoform_glycosylation_sites_oglcnac_atlas.csv\n Output Subdomain\n Name: mouse_protein_xref_oglcnac_atlas.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.4.1/reviewed/mouse_protein_xref_oglcnac_atlas.csv\n Name: mouse_protein_xref_oglcnac_atlas.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.4.1/reviewed/mouse_protein_xref_oglcnac_atlas.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"1361\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"1\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"1362\"\n Name: \"xref_label\"\n Description: \"Label/Name associated with x-ref\"\n Unique Values: \"1\"", "downloadurl": "/ln2data/releases/data/v-2.4.1/reviewed/mouse_protein_xref_oglcnac_atlas.csv" }