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Protein Reaction Participants (Reactome) dataset contains reactions participants information for pathways for fruitfly [taxid:7227] UniProtKB accessions that includes reaction IDs, participant ID, participant name, role, xref ID etc from Reactome database. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB, Reactome and GlyGen\"\n\nDescription Domain\n Keywords\n - Reactome\n - Participant\n\n Pipeline Steps\n - Step-1: The script loads the Reactome participant data from the triplestore containing triples from nt file to retrieve the information extracts the dataset in the csv format.\n\nExecution Domain\n Scripts - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: database_accession.tsv\n URI: https:/data.glygen.org/ln2downloads/chebi/2024_01_31/database_accession.tsv\n Name: uniprot-proteome-drosophila-melanogaster.nt\n URI: https:/data.glygen.org/ln2downloads/ebi/2024_02_13/uniprot-proteome-drosophila-melanogaster.nt\n Output Subdomain\n Name: fruitfly_protein_participants_reactome.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.4.1/reviewed/fruitfly_protein_participants_reactome.csv\n Name: fruitfly_protein_participants_reactome.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.4.1/reviewed/fruitfly_protein_participants_reactome.stat.csv\n\nFields\n Name: \"reaction_id\"\n Description: \"The identifier assigned to a reaction in Reactome database\"\n Unique Values: \"3695\"\n Name: \"participant_id\"\n Description: \"\"\n Unique Values: \"3841\"\n Name: \"participant_name\"\n Description: \"\"\n Unique Values: \"2156\"\n Name: \"role\"\n Description: \"\"\n Unique Values: \"3\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"6111\"\n Name: \"xref_type\"\n Description: \"\"\n Unique Values: \"31\"", "downloadurl": "/ln2data/releases/data/v-2.4.1/reviewed/fruitfly_protein_participants_reactome.csv" }