{ "bcoid": "GLY_000679", "title": "Fruitfly Proteoform Phosphorylation Citations (UniProtKB)", "description": "", "filename": "fruitfly_proteoform_citations_phosphorylation_sites_uniprotkb.csv", "filetype": "csv", "categories": { "species": [ "Drosophila melanogaster" ], "molecule": [ "Protein" ], "tag": [ "Phosphorylation Citations UniProtKB" ], "file_type": [ "csv" ], "status": [ "Reviewed" ], "scope": [ "internal" ] }, "minitable": { "content": [ [ "Q24214-1...", "Phosphoprote..." ], [ "Q9VUY9-1...", "Phosphoprote..." ] ], "headers": [ "uniprotkb_ca...", "title..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "title" }, { "type": "string", "label": "journal_name" }, { "type": "string", "label": "publication_date" }, { "type": "string", "label": "authors" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "src_xref_key" }, { "type": "string", "label": "src_xref_id" } ], [ "Q24214-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q24214" ], [ "Q9VUY9-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9VUY9" ], [ "Q9VAW5-3", "PINK1 Inhibits Local Protein Synthesis to Limit Transmission of Deleterious Mitochondrial DNA Mutations.", "Molecular cell", "2019 Mar 21", "Zhang Y, Wang ZH, Liu Y, Chen Y, Sun N, Gucek M, Zhang F, Xu H", "protein_xref_pubmed", "30772175", "protein_xref_uniprotkb", "Q9VAW5" ], [ "Q9VAW5-3", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9VAW5" ], [ "Q9VFC8-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9VFC8" ], [ "Q07436-1", "Ack promotes tissue growth via phosphorylation and suppression of the Hippo pathway component Expanded.", "Cell discovery", "2016", "Hu L, Xu J, Yin MX, Zhang L, Lu Y, Wu W, Xue Z, Ho MS, Gao G, Zhao Y, Zhang L", "protein_xref_pubmed", "27462444", "protein_xref_uniprotkb", "Q07436" ], [ "Q9NBK5-1", "Control of dendritic branching and tiling by the Tricornered-kinase/Furry signaling pathway in Drosophila sensory neurons.", "Cell", "2004 Oct 15", "Emoto K, He Y, Ye B, Grueber WB, Adler PN, Jan LY, Jan YN", "protein_xref_pubmed", "15479641", "protein_xref_uniprotkb", "Q9NBK5" ], [ "A1Z8P9-1", "Mps1-mediated release of Mad1 from nuclear pores ensures the fidelity of chromosome segregation.", "The Journal of cell biology", "2020 Mar 2", "Cunha-Silva S, Osswald M, Goemann J, Barbosa J, Santos LM, Resende P, Bange T, Ferras C, Sunkel CE, Conde C", "protein_xref_pubmed", "31913420", "protein_xref_uniprotkb", "A1Z8P9" ], [ "Q9XZL8-1", "Shaggy/glycogen synthase kinase 3beta and phosphorylation of Sarah/regulator of calcineurin are essential for completion of Drosophila female meiosis.", "Proceedings of the National Academy of Sciences of the United States of America", "2012 Apr 24", "Takeo S, Swanson SK, Nandanan K, Nakai Y, Aigaki T, Washburn MP, Florens L, Hawley RS", "protein_xref_pubmed", "22421435", "protein_xref_uniprotkb", "Q9XZL8" ], [ "Q45VV3-1", "In vivo regulation of Yorkie phosphorylation and localization.", "Development (Cambridge, England)", "2008 Mar", "Oh H, Irvine KD", "protein_xref_pubmed", "18256197", "protein_xref_uniprotkb", "Q45VV3" ], [ "Q45VV3-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q45VV3" ], [ "P51592-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "P51592" ], [ "Q9V9Y9-1", "Spindle-F Is the Central Mediator of Ik2 Kinase-Dependent Dendrite Pruning in Drosophila Sensory Neurons.", "PLoS genetics", "2015 Nov", "Lin T, Pan PY, Lai YT, Chiang KW, Hsieh HL, Wu YP, Ke JM, Lee MC, Liao SS, Shih HT, Tang CY, Yang SB, Cheng HC, Wu JT, Jan YN, Lee HH", "protein_xref_pubmed", "26540204", "protein_xref_uniprotkb", "Q9V9Y9" ], [ "Q9XZ56-1", "Signaling from Akt to FRAP/TOR targets both 4E-BP and S6K in Drosophila melanogaster.", "Molecular and cellular biology", "2003 Dec", "Miron M, Lasko P, Sonenberg N", "protein_xref_pubmed", "14645523", "protein_xref_uniprotkb", "Q9XZ56" ], [ "Q9VZZ9-1", "An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells.", "Molecular bioSystems", "2007 Apr", "Bodenmiller B, Mueller LN, Pedrioli PG, Pflieger D, Junger MA, Eng JK, Aebersold R, Tao WA", "protein_xref_pubmed", "17372656", "protein_xref_uniprotkb", "Q9VZZ9" ], [ "Q9VZZ9-1", "Recruitment of the protein tyrosine phosphatase CSW by DOS is an essential step during signaling by the sevenless receptor tyrosine kinase.", "The EMBO journal", "1999 Dec 15", "Herbst R, Zhang X, Qin J, Simon MA", "protein_xref_pubmed", "10601017", "protein_xref_uniprotkb", "Q9VZZ9" ], [ "Q7PLI7-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q7PLI7" ], [ "P20240-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "P20240" ], [ "P42003-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "P42003" ], [ "P42003-1", "dSmurf selectively degrades decapentaplegic-activated MAD, and its overexpression disrupts imaginal disc development.", "The Journal of biological chemistry", "2003 Jul 18", "Liang YY, Lin X, Liang M, Brunicardi FC, ten Dijke P, Chen Z, Choi KW, Feng XH", "protein_xref_pubmed", "12754252", "protein_xref_uniprotkb", "P42003" ], [ "Q9VPM5-1", "Drosophila mbm is a nucleolar myc and casein kinase 2 target required for ribosome biogenesis and cell growth of central brain neuroblasts.", "Molecular and cellular biology", "2014 May", "Hovhanyan A, Herter EK, Pfannstiel J, Gallant P, Raabe T", "protein_xref_pubmed", "24615015", "protein_xref_uniprotkb", "Q9VPM5" ], [ "Q9VAW5-3", "An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells.", "Molecular bioSystems", "2007 Apr", "Bodenmiller B, Mueller LN, Pedrioli PG, Pflieger D, Junger MA, Eng JK, Aebersold R, Tao WA", "protein_xref_pubmed", "17372656", "protein_xref_uniprotkb", "Q9VAW5" ], [ "Q24292-1", "Four-jointed is a Golgi kinase that phosphorylates a subset of cadherin domains.", "Science (New York, N.Y.)", "2008 Jul 18", "Ishikawa HO, Takeuchi H, Haltiwanger RS, Irvine KD", "protein_xref_pubmed", "18635802", "protein_xref_uniprotkb", "Q24292" ], [ "Q9VLL3-1", "Characterization of the targeting, binding, and phosphorylation site domains of an A kinase anchor protein and a myristoylated alanine-rich C kinase substrate-like analog that are encoded by a single gene.", "The Journal of biological chemistry", "1999 Sep 17", "Rossi EA, Li Z, Feng H, Rubin CS", "protein_xref_pubmed", "10480937", "protein_xref_uniprotkb", "Q9VLL3" ], [ "P20240-1", "Functional analysis of centrosomal kinase substrates in Drosophila melanogaster reveals a new function of the nuclear envelope component otefin in cell cycle progression.", "Molecular and cellular biology", "2012 Sep", "Habermann K, Mirgorodskaya E, Gobom J, Lehmann V, Muller H, Blumlein K, Deery MJ, Czogiel I, Erdmann C, Ralser M, von Kries JP, Lange BM", "protein_xref_pubmed", "22751930", "protein_xref_uniprotkb", "P20240" ], [ "Q9VXE5-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9VXE5" ], [ "P42003-1", "Drosophila Nemo antagonizes BMP signaling by phosphorylation of Mad and inhibition of its nuclear accumulation.", "Development (Cambridge, England)", "2007 Jun", "Zeng YA, Rahnama M, Wang S, Sosu-Sedzorme W, Verheyen EM", "protein_xref_pubmed", "17507407", "protein_xref_uniprotkb", "P42003" ], [ "Q03720-1", "Simultaneous binding of two protein kinases to a calcium-dependent potassium channel.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "1999 May 15", "Wang J, Zhou Y, Wen H, Levitan IB", "protein_xref_pubmed", "10234050", "protein_xref_uniprotkb", "Q03720" ], [ "P51023-1", "The activities of two Ets-related transcription factors required for Drosophila eye development are modulated by the Ras/MAPK pathway.", "Cell", "1994 Jul 15", "O'Neill EM, Rebay I, Tjian R, Rubin GM", "protein_xref_pubmed", "8033205", "protein_xref_uniprotkb", "P51023" ], [ "Q8IPH9-1", "A dynamically regulated 14-3-3, Slob, and Slowpoke potassium channel complex in Drosophila presynaptic nerve terminals.", "Neuron", "1999 Apr", "Zhou Y, Schopperle WM, Murrey H, Jaramillo A, Dagan D, Griffith LC, Levitan IB", "protein_xref_pubmed", "10230800", "protein_xref_uniprotkb", "Q8IPH9" ], [ "P35220-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "P35220" ], [ "Q86B79-1", "An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells.", "Molecular bioSystems", "2007 Apr", "Bodenmiller B, Mueller LN, Pedrioli PG, Pflieger D, Junger MA, Eng JK, Aebersold R, Tao WA", "protein_xref_pubmed", "17372656", "protein_xref_uniprotkb", "Q86B79" ], [ "Q8SX83-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q8SX83" ], [ "Q961C9-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q961C9" ], [ "P26019-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "P26019" ], [ "Q9VAN6-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9VAN6" ], [ "P09083-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "P09083" ], [ "Q9VGI8-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9VGI8" ], [ "Q9VH95-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9VH95" ], [ "Q9VH95-1", "An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells.", "Molecular bioSystems", "2007 Apr", "Bodenmiller B, Mueller LN, Pedrioli PG, Pflieger D, Junger MA, Eng JK, Aebersold R, Tao WA", "protein_xref_pubmed", "17372656", "protein_xref_uniprotkb", "Q9VH95" ], [ "Q7KRY6-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q7KRY6" ], [ "Q9VFK6-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9VFK6" ], [ "Q7KRY7-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q7KRY7" ], [ "Q9VRP5-3", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9VRP5" ], [ "Q9VHH9-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9VHH9" ], [ "Q9W261-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9W261" ], [ "Q24478-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q24478" ], [ "P08111-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "P08111" ], [ "Q8SWR8-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q8SWR8" ], [ "Q8INM3-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q8INM3" ], [ "Q7YU24-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q7YU24" ], [ "P02828-1", "An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells.", "Molecular bioSystems", "2007 Apr", "Bodenmiller B, Mueller LN, Pedrioli PG, Pflieger D, Junger MA, Eng JK, Aebersold R, Tao WA", "protein_xref_pubmed", "17372656", "protein_xref_uniprotkb", "P02828" ], [ "Q9VHP0-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9VHP0" ], [ "Q9VUM0-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9VUM0" ], [ "Q26263-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q26263" ], [ "A8JUV0-4", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "A8JUV0" ], [ "Q0KHY3-3", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q0KHY3" ], [ "Q9VC45-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9VC45" ], [ "Q7KRW8-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q7KRW8" ], [ "Q8IRB5-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q8IRB5" ], [ "Q8MSX1-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q8MSX1" ], [ "P35820-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "P35820" ], [ "Q03427-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q03427" ], [ "Q9I7K0-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9I7K0" ], [ "P02843-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "P02843" ], [ "Q24574-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q24574" ], [ "Q9VAQ1-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9VAQ1" ], [ "P22058-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "P22058" ], [ "P22058-1", "An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells.", "Molecular bioSystems", "2007 Apr", "Bodenmiller B, Mueller LN, Pedrioli PG, Pflieger D, Junger MA, Eng JK, Aebersold R, Tao WA", "protein_xref_pubmed", "17372656", "protein_xref_uniprotkb", "P22058" ], [ "A1Z8D0-1", "PWP1 Mediates Nutrient-Dependent Growth Control through Nucleolar Regulation of Ribosomal Gene Expression.", "Developmental cell", "2017 Oct 23", "Liu Y, Mattila J, Ventela S, Yadav L, Zhang W, Lamichane N, Sundstrom J, Kauko O, Grenman R, Varjosalo M, Westermarck J, Hietakangas V", "protein_xref_pubmed", "29065309", "protein_xref_uniprotkb", "A1Z8D0" ], [ "P91682-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "P91682" ], [ "Q9V4C8-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9V4C8" ], [ "Q9NK54-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9NK54" ], [ "P29746-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "P29746" ], [ "P13395-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "P13395" ], [ "P13395-1", "An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells.", "Molecular bioSystems", "2007 Apr", "Bodenmiller B, Mueller LN, Pedrioli PG, Pflieger D, Junger MA, Eng JK, Aebersold R, Tao WA", "protein_xref_pubmed", "17372656", "protein_xref_uniprotkb", "P13395" ], [ "O46072-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "O46072" ], [ "Q960Z0-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q960Z0" ], [ "Q9VSL7-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9VSL7" ], [ "Q9VJ62-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9VJ62" ], [ "P84040-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "P84040" ], [ "Q8T8R1-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q8T8R1" ], [ "O16810-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "O16810" ], [ "Q9V4F9-1", "Phosphoproteome analysis of Drosophila melanogaster embryos.", "Journal of proteome research", "2008 Apr", "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP", "protein_xref_pubmed", "18327897", "protein_xref_uniprotkb", "Q9V4F9" ] ] }, "readme": "Name\n - Fruitfly Proteoform Phosphorylation Citations (UniProtKB)\n\nVersion\n - v-2.4.1\n\nCreated on\n - 2022-09-02T13:32:35.505543\n\nModified on\n - 2023-03-14T17:12:29.696Z\n\nCreated by\n - [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Jingyue Wu [jingyue.wu@email.gwu.edu]\n\nAuthors\n - \n\nChecksum\n - \n\nDescription Domain\n Keywords\n - publications\n - PMID\n - journal\n - citations\n - authors\n - UniProtKB\n - PubMed\n - Phosphorylation\n\n Pipeline Steps\n - Step-1: The script parses the input file for PMIDs and accesses the NCBI Entrez infrastructure to download the publication information of the corresponding PMIDs\n\nExecution Domain\n Scripts - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-proteoform-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: fruitfly_proteoform_phosphorylation_sites_uniprotkb.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.4.1/reviewed/fruitfly_proteoform_phosphorylation_sites_uniprotkb.csv\n Output Subdomain\n Name: fruitfly_proteoform_citations_phosphorylation_sites_uniprotkb.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.4.1/reviewed/fruitfly_proteoform_citations_phosphorylation_sites_uniprotkb.csv\n Name: fruitfly_proteoform_citations_phosphorylation_sites_uniprotkb.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.4.1/reviewed/fruitfly_proteoform_citations_phosphorylation_sites_uniprotkb.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"733\"\n Name: \"title\"\n Description: \"Title of the published article in the journal\"\n Unique Values: \"44\"\n Name: \"journal_name\"\n Description: \"The name of the journal in which the article is published\"\n Unique Values: \"24\"\n Name: \"publication_date\"\n Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n Unique Values: \"44\"\n Name: \"authors\"\n Description: \"NA\"\n Unique Values: \"44\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"1\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"44\"\n Name: \"src_xref_key\"\n Description: \"Source Xref key\"\n Unique Values: \"1\"\n Name: \"src_xref_id\"\n Description: \"Source X-ref ID\"\n Unique Values: \"733\"", "downloadurl": "/ln2data/releases/data/v-2.4.1/reviewed/fruitfly_proteoform_citations_phosphorylation_sites_uniprotkb.csv" }