{ "bcoid": "GLY_000525", "title": "Disease ID Mapping", "description": "The Human Disease Ontology Mapping dataset contains human [taxid:9606] UniProtKB canonical accession ...", "filename": "protein_disease_idmap.csv", "filetype": "csv", "categories": { "molecule": [ "Protein" ], "tag": [ "Disease ID Mapping" ], "file_type": [ "csv" ], "status": [ "Reviewed" ], "scope": [ "internal" ] }, "minitable": { "content": [ [ "616002...", "protein_xref..." ], [ "145750...", "protein_xref..." ] ], "headers": [ "xref_id...", "xref_key..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "xref_id" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "mondo_id" }, { "type": "string", "label": "do_id" }, { "type": "string", "label": "xref_map_src" }, { "type": "string", "label": "do_map_src" } ], [ "616002", "protein_xref_omim", "0014451", "0111132", "mondo", "do" ], [ "145750", "protein_xref_omim", "0007788", "1172", 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"0060284", "mondo", "do" ], [ "612918", "protein_xref_omim", "0013038", "0080351", "mondo", "do" ], [ "619027", "protein_xref_omim", "0033614", "0112346", "mondo", "do" ], [ "619028", "protein_xref_omim", "0033615", "0112138", "mondo", "do" ], [ "300813", "protein_xref_omim", "0010434", "5485", "mondo", "do" ], [ "300814", "protein_xref_omim", "0010435", "0111795", "mondo", "do" ], [ "272750", "protein_xref_omim", "0010099", "4795", "mondo", "do" ], [ "300816", "protein_xref_omim", "0010437", "0111502", "mondo", "do" ], [ "303350", "protein_xref_omim", "0010559", "0060246", "mondo", "do" ], [ "303350", "protein_xref_omim", "0010559", "2476", "mondo", "do" ], [ "601454", "protein_xref_omim", "0011084", "0111283", "mondo", "do" ], [ "601455", "protein_xref_omim", "0011085", "0110186", "mondo", "do" ], [ "601457", "protein_xref_omim", "0011086", "0090013", "mondo", "do" ] ] }, "readme": "Name\n - Disease ID Mapping\n\nVersion\n - v-2.4.1\n\nCreated on\n - 2020-08-19T14:06:44.941024\n\nModified on\n - 2022-09-26T09:08:12.765026\n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Jingyue Wu [jingyue.wu@email.gwu.edu]\n\nAuthors\n - \n\nChecksum\n - \n\nUsability Domain\n - The Human Disease Ontology Mapping dataset contains human [taxid:9606] UniProtKB canonical accession cross-reference mappings to the Disease Ontology Ids (DOID)\n - If you use this dataset please provide proper attribution to GlyGen and Disease ontology, Monarch Disease Ontology and EMBL-EBI-UniProt\n\nExecution Domain\n Scripts\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: hcv1a_protein_disease.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.4.1/compiled/hcv1a_protein_disease.csv\n Name: hcv1b_protein_disease.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.4.1/compiled/hcv1b_protein_disease.csv\n Name: sarscov1_protein_disease.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.4.1/compiled/sarscov1_protein_disease.csv\n Name: sarscov2_protein_disease.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.4.1/compiled/sarscov2_protein_disease.csv\n Name: mondo.json\n URI: https:/data.glygen.org/ln2downloads/mondo/2024_01_31/mondo.json\n Output Subdomain\n Name: protein_disease_idmap.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.4.1/reviewed/protein_disease_idmap.csv\n Name: protein_disease_idmap.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.4.1/reviewed/protein_disease_idmap.stat.csv\n\nFields\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"9778\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"2\"\n Name: \"mondo_id\"\n Description: \"The Mondo Disease Ontology (MONDO) identifier\"\n Unique Values: \"9681\"\n Name: \"do_id\"\n Description: \"Disease Ontology identifier\"\n Unique Values: \"5358\"\n Name: \"xref_map_src\"\n Description: \"\"\n Unique Values: \"1\"\n Name: \"do_map_src\"\n Description: \"\"\n Unique Values: \"3\"", "downloadurl": "/ln2data/releases/data/v-2.4.1/reviewed/protein_disease_idmap.csv" }