{ "uniprot_canonical_ac": "A0A0G2K2Q8-1", "uniprot_ac": "A0A0G2K2Q8", "uniprot_id": "A0A0G2K2Q8_RAT", "mass": { "chemical_mass": 72000.0, "monoisotopic_mass": 72000.0 }, "refseq": { "ac": "NP_001102642", "name": "collagen alpha-1(XIII) chain", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001102642" }, "gene_names": [ { "name": "Col13a1", "resource": "UniProtKB", "type": "recommended", "url": "https://www.uniprot.org/uniprot/A0A0G2K2Q8", "id": "A0A0G2K2Q8" }, { "name": "Col13a1", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_006256543", "id": "XP_006256543" } ], "protein_names": [ { "name": "Collagen type XIII alpha 1 chain", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "A0A0G2K2Q8" }, { "name": "collagen alpha-1(XIII) chain isoform X13", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_006256543", "id": "XP_006256543" }, { "name": "collagen alpha-1(XIII) chain", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001102642", "id": "NP_001102642" }, { "name": "procollagen, type XIII, alpha 1; collagen, type XIII, alpha 1", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001102642", "id": "NP_001102642" } ], "function": [], "disease": [ { "disease_id": "DOID:0110673", "recommended_name": { "id": "DOID:0110673", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:0110673", "name": "congenital myasthenic syndrome 19", "description": "A congenital myasthenic syndrome characterized by autosomal recessive inheritance of defects in the neuromuscular junction resulting in generalized muscle weakness, exercise intolerance, and respiratory insufficiency that has_material_basis_in homozygous mutation in the COL13A1 gene on chromosome 10q22." }, "synonyms": [ { "id": "DOID:0110673", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:0110673", "name": "CMS19", "description": "" }, { "id": "MONDO:0014745", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0014745", "name": "congenital myasthenic syndrome 19", "description": "Any congenital myasthenic syndrome in which the cause of the disease is a mutation in the COL13A1 gene." }, { "id": "MONDO:0014745", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0014745", "name": "CMS19", "description": "" }, { "id": "MONDO:0014745", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0014745", "name": "COL13A1 congenital myasthenic syndrome", "description": "" }, { "id": "MONDO:0014745", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0014745", "name": "congenital myasthenic syndrome caused by mutation in COL13A1", "description": "" }, { "id": "MONDO:0014745", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0014745", "name": "congenital myasthenic syndrome type 19", "description": "" }, { "id": "MONDO:0014745", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0014745", "name": "myasthenic syndrome, congenital, 19", "description": "" }, { "id": "MONDO:0014745", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0014745", "name": "myasthenic syndrome, congenital, type 19", "description": "" }, { "id": "MIM:616720", "resource": "MIM", "url": "https://www.omim.org/entry/616720", "name": "Myasthenic syndrome, congenital, 19", "description": "Myasthenic syndrome, congenital, 19" } ], "evidence": [ { "id": "0110673", "database": "Alliance of Genome Resources", "url": "https://www.alliancegenome.org/disease/DOID:0110673" } ] } ], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "A0A0G2K2Q8", "url": "https://www.uniprot.org/uniprot/A0A0G2K2Q8" } ], "common_name": "Rat" } ], "gene": [ { "name": "Col13a1", "url": "https://www.uniprot.org/uniprot/A0A0G2K2Q8", "locus": { "chromosome": "20", "start_pos": 29783965, "end_pos": 29924032, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSRNOG00000000552", "url": "https://www.ensembl.org/id/ENSRNOG00000000552" } ] } } ], "crossref": [ { "id": "ENSRNOG00000000552", "url": "https://bgee.org/?page=gene&gene_id=ENSRNOG00000000552", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "499431", "url": "https://www.ncbi.nlm.nih.gov/gene/499431", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR008160", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008160", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "rno:499431", "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+rno:499431", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DKCSKFQ", "url": "https://omabrowser.org/oma/group/DKCSKFQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "4271163at2759", "url": "http://www.orthodb.org/?query=4271163at2759", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR37456", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR37456", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR37456:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR37456:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01391", "url": "http://pfam.xfam.org/family/PF01391", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "R-RNO-1442490", "url": "https://www.reactome.org/PathwayBrowser/#R-RNO-1442490", "database": "Reactome", "categories": [ "Protein Classification" ] }, { "id": "R-RNO-1650814", "url": "https://www.reactome.org/PathwayBrowser/#R-RNO-1650814", "database": "Reactome", "categories": [ "Protein Classification" ] }, { "id": "R-RNO-216083", "url": "https://www.reactome.org/PathwayBrowser/#R-RNO-216083", "database": "Reactome", "categories": [ "Protein Classification" ] }, { "id": "R-RNO-8948216", "url": "https://www.reactome.org/PathwayBrowser/#R-RNO-8948216", "database": "Reactome", "categories": [ "Protein Classification" ] }, { "id": "NP_001102642", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001102642", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "1595704", "url": "http://rgd.mcw.edu/tools/genes/genes_view.cgi?id=1595704", "database": "RGD", "categories": [ "Organism-specific" ] }, { "id": "A0A0G2K2Q8", "url": "https://www.uniprot.org/uniprot/A0A0G2K2Q8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A0G2K2Q8-1", "url": "https://www.uniprot.org/uniprot/A0A0G2K2Q8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I5ZZ94", "url": "https://www.uniprot.org/uniprot/A0A8I5ZZ94", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I5ZZ94-1", "url": "https://www.uniprot.org/uniprot/A0A8I5ZZ94-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I6GBH4", "url": "https://www.uniprot.org/uniprot/A0A8I6GBH4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I6GBH4-1", "url": "https://www.uniprot.org/uniprot/A0A8I6GBH4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I6GF41", "url": "https://www.uniprot.org/uniprot/A0A8I6GF41", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I6GF41-1", "url": "https://www.uniprot.org/uniprot/A0A8I6GF41-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "B1WC63", "url": "https://www.uniprot.org/uniprot/B1WC63", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "B1WC63-1", "url": "https://www.uniprot.org/uniprot/B1WC63-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVAERARKAAASSNRGPGDLGAPGPGTVALAEQCARLPSPGCCGLLALALCSLALSLLAHFRTAELQARVLRLESERGEQQMEKAILGRVNQLLDEKWKFYSRRRREAPKMSPGCNCPPGPPGPTGRPGLPGDKGAIGMPGRVGVKGQPGEKGAPGDAGISIIGPRGPPGQPGTRGFPGFPGPIGLDGRPGHPGPKGETGLVGPRGQPGPQGQKGEKGQCGEYPHREYPSGTLAALRSNPIISLKLLPLLNSVRLAPPPVIKRRTFQGEQSQAGIQGPPGPPGPPGPIGPLGHPGLPGPIGPPGLPGPPGPKGDPGIQGYHGRKGERGLPGMPGKHGAKGAPGIAVAGMKGEPGTPGAKGEKGATGSPGLLGQKGEKGDAGNAIGGGRGEPGPPGLPGPPGPKGEAGVDGQAGPPGQQGDKGQPGAAGEPGPTGPKGSKGEPGKGEMVDYNSSINEALQEIRTLALMGPPGLPGQTGPPGPPGTPGQRGEIGLPGPPGHDGDKGPRGKPGDMGPAGPQGPPGKDGPPGMKGEVGPPGNPGEKGETGQAGPPGLDGPTGEKGEPGDEGRPGATGLPGPIGLPGFTGEKGEAGEKGDPGAEVPGPPGPEGPPGPPGLQGIPGPKGEAGLDGSKGEKGSQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK", "length": 739, "header": "tr|A0A0G2K2Q8-1|A0A0G2K2Q8_RAT Isoform 1 of Collagen type XIII alpha 1 chain OS=Rattus norvegicus OX=10116 GN=Col13a1 PE=4 SV=1 CANONICAL=A0A0G2K2Q8-1" }, "isoforms": [ { "isoform_ac": "A0A0G2K2Q8-1", "url": "", "sequence": { "sequence": "MVAERARKAAASSNRGPGDLGAPGPGTVALAEQCARLPSPGCCGLLALALCSLALSLLAHFRTAELQARVLRLESERGEQQMEKAILGRVNQLLDEKWKFYSRRRREAPKMSPGCNCPPGPPGPTGRPGLPGDKGAIGMPGRVGVKGQPGEKGAPGDAGISIIGPRGPPGQPGTRGFPGFPGPIGLDGRPGHPGPKGETGLVGPRGQPGPQGQKGEKGQCGEYPHREYPSGTLAALRSNPIISLKLLPLLNSVRLAPPPVIKRRTFQGEQSQAGIQGPPGPPGPPGPIGPLGHPGLPGPIGPPGLPGPPGPKGDPGIQGYHGRKGERGLPGMPGKHGAKGAPGIAVAGMKGEPGTPGAKGEKGATGSPGLLGQKGEKGDAGNAIGGGRGEPGPPGLPGPPGPKGEAGVDGQAGPPGQQGDKGQPGAAGEPGPTGPKGSKGEPGKGEMVDYNSSINEALQEIRTLALMGPPGLPGQTGPPGPPGTPGQRGEIGLPGPPGHDGDKGPRGKPGDMGPAGPQGPPGKDGPPGMKGEVGPPGNPGEKGETGQAGPPGLDGPTGEKGEPGDEGRPGATGLPGPIGLPGFTGEKGEAGEKGDPGAEVPGPPGPEGPPGPPGLQGIPGPKGEAGLDGSKGEKGSQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK", "length": 739, "header": "tr|A0A0G2K2Q8-1|A0A0G2K2Q8_RAT Isoform 1 of Collagen type XIII alpha 1 chain OS=Rattus norvegicus OX=10116 GN=Col13a1 PE=4 SV=1 CANONICAL=A0A0G2K2Q8-1" }, "locus": { "chromosome": "20", "start_pos": 29923564, "end_pos": 29785785, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSRNOT00000085877.2", "url": "https://www.ensembl.org/id/ENSRNOT00000085877.2" }, { "database": "Ensembl Peptide", "id": "ENSRNOP00000072337.1", "url": "https://www.ensembl.org/id/ENSRNOP00000072337.1" } ] } }, { "isoform_ac": "A0A8I5ZZ94-1", "url": "", "sequence": { "sequence": "MVAERARKAAASSNRGPGDLGAPGPGTVALAEQCARLPSPGCCGLLALALCSLALSLLAHFRTAELQARVLRLESERGEQQMEKAILGRVNQLLDEKWKFYSRRRREAPKMSPGCNCPPGPPGPTGRPGLPGDKGAIGMPGRVGVKGQPGEKGAPGDAGISIIGPRGPPGQPGTRGFPGFPGPIGLDGRPGHPGPKGETGLVGPRGQPGPQGQKGEKGQCGEYPHRGEQSQAGIQGPPGPPGPPGPIGPLGHPGLPGPIGPPGLPGPPGPKGDPGIQGYHGRKGERGLPGMPGKHGAKGAPGIAVAGMKGEPGTPGAKGEKGATGSPGLLGQKGEKGDAGNAIGGGRGEPGPPGLPGPPGPKGEAGVDGQAGPPGQQGDKGQPGAAGEPGPTGPKGSKGEPGKGEMVDYNSSINEALQEIRTLALMGPPGLPGQTGPPGPPGTPGQRGEIGLPGPPGHDGDKGPRGKPGDMGPAGPQGPPGKDGPPGMKGEVGPPGNPGEKGETGQAGPPGLDGPTGEKGEPGDEGRPGATGLPGPIGLPGFTGEKGEAGEKGDPGAEVPGPPGPEGPPGPPGLQGIPGPKGEAGLDGSKGEKGSQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK", "length": 698, "header": "tr|A0A8I5ZZ94-1|A0A8I5ZZ94_RAT Computationally mapped isoform of Collagen type XIII alpha 1 chain OS=Rattus norvegicus OX=10116 GN=Col13a1 PE=4 SV=1 CANONICAL=A0A0G2K2Q8-1" }, "locus": { "chromosome": "20", "start_pos": 29923564, "end_pos": 29785785, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSRNOT00000102397.1", "url": "https://www.ensembl.org/id/ENSRNOT00000102397.1" }, { "database": "Ensembl Peptide", "id": "ENSRNOP00000083370.1", "url": "https://www.ensembl.org/id/ENSRNOP00000083370.1" } ] } }, { "isoform_ac": "A0A8I6GBH4-1", "url": "", "sequence": { "sequence": "MVAERARKAAASSNRGPGDLGAPGPGTVALAEQCARLPSPGCCGLLALALCSLALSLLAHFRTAELQARVLRLESERGEQQMEKAILGRVNQLLDEKWKFYSRRRREAPKMSPGCNCPPGPPGPTGRPGLPGDKGAIGMPGRVGAPGDAGISIIGPRGPPGQPGTRGFPGFPGPIGLDGRPGHPGPKGETGLVGPRGQPGPQGQKGEKGQCGEYPHREYPSGTLAALRSNPIISLKLLPLLNSVRLAPPPVIKRRTFQGEQSQAGIQGPPGPPGPPGPIGPLGHPGLPGPIGPPGLPGPPGPKGDPGIQGYHGRKGERGLPGMPGKHGAKGAPGIAVAGMKGEPGTPGAKGEKGATGSPGLLGQKGEKGDAGNAIGGGRGEPGPPGLPGPPGPKGEAGVDGQAGPPGQQGDKGQPGAAGEPGPTGPKGSKGEPGKGEMVDYNSSINEALQEIRTLALMGPPGLPGQTGPPGPPGTPGQRGEIGLPGPPGHDGDKGPRGKPGDMGPAGPQGPPGKDGPPGMKGEVGPPGNPGEKGETGQAGPPGEKGEAGEKGDPGAEVPGPPGPEGPPGPPGLQGIPGPKGEAGLDGSKGEKGSQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK", "length": 709, "header": "tr|A0A8I6GBH4-1|A0A8I6GBH4_RAT Computationally mapped isoform of Collagen type XIII alpha 1 chain OS=Rattus norvegicus OX=10116 GN=Col13a1 PE=4 SV=1 CANONICAL=A0A0G2K2Q8-1" }, "locus": { "chromosome": "20", "start_pos": 29923564, "end_pos": 29785785, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSRNOT00000098211.1", "url": "https://www.ensembl.org/id/ENSRNOT00000098211.1" }, { "database": "Ensembl Peptide", "id": "ENSRNOP00000084135.1", "url": "https://www.ensembl.org/id/ENSRNOP00000084135.1" } ] } }, { "isoform_ac": "A0A8I6GF41-1", "url": "", "sequence": { "sequence": "MVAERARKAAASSNRGPGDLGAPGPGTVALAEQCARLPSPGCCGLLALALCSLALSLLAHFRTAELQARVLRLESERGEQQMEKAILGRVNQLLDEKWKFYSRRRREAPKMSPGCNCPPGPPGPTGRPGLPGDKGAIGMPGRVGAPGDAGISIIGPRGPPGQPGTRGFPGFPGPIGLDGRPGHPGPKGETGLVGPRGQPGPQGQKGEKGQCGEYPHREYPSGTLAALRSNPIISLKGEQSQAGIQGPPGPPGPPGPIGPLGHPGLPGPIGPPGLPGPPGPKGDPGIQGYHGRKGERGLPGMPGKHGAKGAPGIAVAGMKGEPGTPGAKGEKGATGSPGLLGQKGEKGDAGNAIGGGRGEPGPPGLPGPPGPKGEAGVDGQAGPPGQQGDKGQPGAAGEPGPTGPKGSKGEPGKGEMVDYNSSINEALQEIRTLALMGPPGLPGQTGPPGPPGTPGQRGEIGLPGPPGHDGDKGPRGKPGDMGPAGPQGPPGKDGPPGMKGEVGPPGNPGEKGETGQAGPPGEKGEAGEKGDPGAEVPGPPGPEGPPGPPGLQGIPGPKGEAGLDGSKGEKGSQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK", "length": 675, "header": "tr|A0A8I6GF41-1|A0A0G2K2Q8_RAT Computationally mapped isoform of Collagen type XIII alpha 1 chain OS=Rattus norvegicus OX=10116 GN=Col13a1 PE=4 SV=1 CANONICAL=A0A0G2K2Q8-1" }, "locus": { "chromosome": "20", "start_pos": 29923564, "end_pos": 29785785, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSRNOT00000107190.1", "url": "https://www.ensembl.org/id/ENSRNOT00000107190.1" }, { "database": "Ensembl Peptide", "id": "ENSRNOP00000087411.1", "url": "https://www.ensembl.org/id/ENSRNOP00000087411.1" } ] } }, { "isoform_ac": "B1WC63-1", "url": "", "sequence": { "sequence": "MVAERARKAAASSNRGPGDLGAPGPGTVALAEQCARLPSPGCCGLLALALCSLALSLLAHFRTAELQARVLRLESERGEQQMEKAILGRVNQLLDEKWKFYSRRRREAPKMSPGCNCPPGPPGPTGRPGLPGAPGDAGISIIGPRGPPGQPGTRGFPGFPGPIGLDGRPGHPGPKGETGLVGPRGQPGPQGQKGEKGQCGEYPHRGEQSQAGIQGPPGPPGPPGPIGPLGHPGLPGPIGPPGLPGPPGPKGDPGIQGYHGRKGERGLPGMPGKHGAKGAPGIAVAGMKGEKGATGSPGLLGQKGEKGDAGNAIGGGRGEPGPPGLPGPPGPKGEAGVDGQAGPPGQQGDKGQPGAAGEPGPTGPKGSKGEPGKGEMVDYNSSINEALQEIRTLALMGPPGLPGQTGPPGPPGTPGQRGEIGLPGPPGHDGDKGPRGKPGDMGPAGPQGPPGKDGPPGMKGEVGPPGNPGEKGETGQAGPPGLDGPTGEKGEPGDEGRPGATGLPGPIGLPGFTGEKGEAGEKGDPGAEVPGPPGPEGPPGPPGLQGIPGPKGEAGLDGSKGEKGSQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK", "length": 680, "header": "tr|B1WC63-1|A0A0G2K2Q8_RAT Computationally mapped isoform of Collagen type XIII alpha 1 chain OS=Rattus norvegicus OX=10116 GN=Col13a1 PE=4 SV=1 CANONICAL=A0A0G2K2Q8-1" }, "locus": { "chromosome": "20", "start_pos": 29923564, "end_pos": 29785785, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSRNOT00000046537.5", "url": "https://www.ensembl.org/id/ENSRNOT00000046537.5" }, { "database": "Ensembl Peptide", "id": "ENSRNOP00000042926.5", "url": "https://www.ensembl.org/id/ENSRNOP00000042926.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [], "pathway": [ { "id": "rno:499431", "name": "", "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+rno:499431", "resource": "KEGG Pathway" }, { "id": "R-RNO-1442490", "name": "Collagen degradation", "url": "https://www.reactome.org/PathwayBrowser/#R-RNO-1442490", "resource": "Reactome", "description": "Collagen degradation" }, { "id": "R-RNO-1650814", "name": "Collagen biosynthesis and modifying enzymes", "url": "https://www.reactome.org/PathwayBrowser/#R-RNO-1650814", "resource": "Reactome", "description": "Collagen biosynthesis and modifying enzymes" }, { "id": "R-RNO-216083", "name": "Integrin cell surface interactions", "url": "https://www.reactome.org/PathwayBrowser/#R-RNO-216083", "resource": "Reactome", "description": "Integrin cell surface interactions" }, { "id": "R-RNO-8948216", "name": "Collagen chain trimerization", "url": "https://www.reactome.org/PathwayBrowser/#R-RNO-8948216", "resource": "Reactome", "description": "Collagen chain trimerization" } ], "orthologs": [ { "uniprot_canonical_ac": "Q5TAT6-1", "protein_name": "Collagen alpha-1(XIII) chain", "gene_name": "COL13A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVAERTHKAAATGARGPGELGAPGTVALVAARAERGARLPSPGSCGLLTLALCSLALSLLAHFRTAELQARVLRLEAERGEQQMETAILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCPPGPPGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK", "length": 717 }, "evidence": [ { "id": "45240237", "url": "http://www.informatics.jax.org/homology/45240237", "database": "MGI" } ], "common_name": "Human" }, { "uniprot_canonical_ac": "Q9R1N9-1", "protein_name": "Collagen alpha-1(XIII) chain", "gene_name": "Col13a1", "tax_id": 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"database": "UniProtKB", "id": "A0A0G2K2Q8", "url": "https://www.uniprot.org/uniprot/A0A0G2K2Q8" } ], "pmid": "" }, { "name": "extracellular matrix structural constituent conferring tensile strength", "id": "GO:0030020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030020", "evidence": [ { "database": "UniProtKB", "id": "A0A0G2K2Q8", "url": "https://www.uniprot.org/uniprot/A0A0G2K2Q8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "extracellular matrix organization", "id": "GO:0030198", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030198", "evidence": [ { "database": "UniProtKB", "id": "A0A0G2K2Q8", "url": "https://www.uniprot.org/uniprot/A0A0G2K2Q8" } ], "pmid": "" }, { "name": "cell-matrix adhesion", "id": "GO:0007160", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007160", "evidence": [ { "database": "UniProtKB", "id": "A0A0G2K2Q8", "url": "https://www.uniprot.org/uniprot/A0A0G2K2Q8" } ], "pmid": "" }, { "name": "cell-cell adhesion", "id": "GO:0098609", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098609", "evidence": [ { "database": "UniProtKB", "id": "A0A0G2K2Q8", "url": "https://www.uniprot.org/uniprot/A0A0G2K2Q8" } ], "pmid": "" }, { "name": "skeletal system development", "id": "GO:0001501", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001501", "evidence": [ { "database": "UniProtKB", "id": "A0A0G2K2Q8", "url": "https://www.uniprot.org/uniprot/A0A0G2K2Q8" } ], "pmid": "" }, { "name": "morphogenesis of a branching structure", "id": "GO:0001763", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001763", "evidence": [ { "database": "UniProtKB", "id": "A0A0G2K2Q8", "url": "https://www.uniprot.org/uniprot/A0A0G2K2Q8" } ], "pmid": "" }, { "name": "endochondral ossification", "id": "GO:0001958", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001958", "evidence": [ { "database": "UniProtKB", "id": "A0A0G2K2Q8", "url": "https://www.uniprot.org/uniprot/A0A0G2K2Q8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], 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