{ "uniprot_canonical_ac": "A0A0G2JTG3-1", "uniprot_ac": "A0A0G2JTG3", "uniprot_id": "A0A0G2JTG3_RAT", "mass": { "chemical_mass": 81831.0, "monoisotopic_mass": 81831.0 }, "refseq": {}, "gene_names": [ { "name": "Susd1", "resource": "UniProtKB", "type": "recommended", "url": "https://www.uniprot.org/uniprot/A0A0G2JTG3", "id": "A0A0G2JTG3" } ], "protein_names": [ { "name": "Sushi domain containing 1", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "A0A0G2JTG3" } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "A0A0G2JTG3", "url": "https://www.uniprot.org/uniprot/A0A0G2JTG3" } ], "common_name": "Rat" } ], "gene": [ { "name": "Susd1", "url": "https://www.uniprot.org/uniprot/A0A0G2JTG3", "locus": { "chromosome": "5", "start_pos": 74157773, "end_pos": 74276291, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSRNOG00000056819", "url": "https://www.ensembl.org/id/ENSRNOG00000056819" } ] } } ], "crossref": [ { "id": "ENSRNOG00000056819", "url": "https://bgee.org/?page=gene&gene_id=ENSRNOG00000056819", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00033", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00033", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd00054", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00054", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000152", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000152", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000436", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000436", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000742", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000742", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001881", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001881", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009030", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009030", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018097", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018097", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035976", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035976", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "TCLRWQI", "url": "https://omabrowser.org/oma/group/TCLRWQI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR24051", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24051", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24051:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24051:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00084", "url": "http://pfam.xfam.org/family/PF00084", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "PF07645", "url": "http://pfam.xfam.org/family/PF07645", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "1306966", "url": "http://rgd.mcw.edu/tools/genes/genes_view.cgi?id=1306966", "database": "RGD", "categories": [ "Organism-specific" ] }, { "id": "A0A0G2JTG3", "url": "https://www.uniprot.org/uniprot/A0A0G2JTG3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A0G2JTG3-1", "url": "https://www.uniprot.org/uniprot/A0A0G2JTG3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGQGPRGTRRSPGCGLQRLLWLLLLLSLARGASGEPGTDDVCATCHEHATCQQKEGKRICICNYGFWGNGRTRCVDKDECQFGATVICGNHTSCHNTPGGFYCVCHTGYRATNNKKMFIPNDGTFCADVDECEDSGLCRRGGRCINTPGSFECYCMEGYVAKNGSEPFHPHADATSCTEIDCGIPPEVPGAYIVGSYSSTLGGQAHYSCKEGFLSISGDRVSRCTALGAWEPPELLCQEISCGSPPEVQNAILVGNHSSSQGSVAHYDCEEGFESPGGKITSVCTDSGSWSEITYACAEIAMVIHDVWVFNDTCVRWQRSPERVNSKVTYLIHTERLQPDAVESVYEETINVTTDSKTPEVCLHLQQGANYTVSISAAPPRRSVPASLSFQTAEDGLLEDDGIFNISVFNETCLKLNRHSRQAGSEQMYQVEALGQRWYLENFYHAVSYNFTTRDQAPKLCLDLLPATDYMINITLLRPTELRSAQVTVTTSATAKQPIDLSVCNDICLRQSSLKSVGAAEMYLFHVWGQRYQKAFVQEMVLNASNSQDPEICLDPHGGTSYNVSFQALSSALPVVIYLTTLITEPPLPEVDFFTVRGRLLPSFRLRKAKEINGPISSYQVLVLPLSLQSTFSCDSEGITSFFGNASPADGYVAAEILASDVPDDTLEISIGDRLYYGEYYNAPLKTVNEYCILLRITSEWNKVRRYSCAVMAEVKDSSLTVQQMVGVGLGSVAFVTILAFLSFSAV", "length": 747, "header": "tr|A0A0G2JTG3-1|A0A0G2JTG3_RAT Isoform 1 of Sushi domain containing 1 OS=Rattus norvegicus OX=10116 GN=Susd1 PE=4 SV=2 CANONICAL=A0A0G2JTG3-1" }, "isoforms": [ { "isoform_ac": "A0A0G2JTG3-1", "url": "", "sequence": { "sequence": "MGQGPRGTRRSPGCGLQRLLWLLLLLSLARGASGEPGTDDVCATCHEHATCQQKEGKRICICNYGFWGNGRTRCVDKDECQFGATVICGNHTSCHNTPGGFYCVCHTGYRATNNKKMFIPNDGTFCADVDECEDSGLCRRGGRCINTPGSFECYCMEGYVAKNGSEPFHPHADATSCTEIDCGIPPEVPGAYIVGSYSSTLGGQAHYSCKEGFLSISGDRVSRCTALGAWEPPELLCQEISCGSPPEVQNAILVGNHSSSQGSVAHYDCEEGFESPGGKITSVCTDSGSWSEITYACAEIAMVIHDVWVFNDTCVRWQRSPERVNSKVTYLIHTERLQPDAVESVYEETINVTTDSKTPEVCLHLQQGANYTVSISAAPPRRSVPASLSFQTAEDGLLEDDGIFNISVFNETCLKLNRHSRQAGSEQMYQVEALGQRWYLENFYHAVSYNFTTRDQAPKLCLDLLPATDYMINITLLRPTELRSAQVTVTTSATAKQPIDLSVCNDICLRQSSLKSVGAAEMYLFHVWGQRYQKAFVQEMVLNASNSQDPEICLDPHGGTSYNVSFQALSSALPVVIYLTTLITEPPLPEVDFFTVRGRLLPSFRLRKAKEINGPISSYQVLVLPLSLQSTFSCDSEGITSFFGNASPADGYVAAEILASDVPDDTLEISIGDRLYYGEYYNAPLKTVNEYCILLRITSEWNKVRRYSCAVMAEVKDSSLTVQQMVGVGLGSVAFVTILAFLSFSAV", "length": 747, "header": "tr|A0A0G2JTG3-1|A0A0G2JTG3_RAT Isoform 1 of Sushi domain containing 1 OS=Rattus norvegicus OX=10116 GN=Susd1 PE=4 SV=2 CANONICAL=A0A0G2JTG3-1" }, "locus": { "chromosome": "5", "start_pos": 74275703, "end_pos": 74158562, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSRNOT00000085109.2", "url": "https://www.ensembl.org/id/ENSRNOT00000085109.2" }, { "database": "Ensembl Peptide", "id": "ENSRNOP00000068702.2", "url": "https://www.ensembl.org/id/ENSRNOP00000068702.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A0G2JTG3", "url": "https://www.uniprot.org/uniprot/A0A0G2JTG3" } ], "pmid": "" }, { "name": "cell periphery", "id": "GO:0071944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071944", "evidence": [ { "database": "UniProtKB", "id": "A0A0G2JTG3", "url": "https://www.uniprot.org/uniprot/A0A0G2JTG3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "A0A0G2JTG3", "url": "https://www.uniprot.org/uniprot/A0A0G2JTG3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 163, "end_pos": 165, "annotation": "n_glycosylation_sequon" }, { "start_pos": 256, "end_pos": 258, "annotation": "n_glycosylation_sequon" }, { "start_pos": 311, "end_pos": 313, "annotation": "n_glycosylation_sequon" }, { "start_pos": 351, "end_pos": 353, "annotation": "n_glycosylation_sequon" }, { "start_pos": 370, "end_pos": 372, "annotation": "n_glycosylation_sequon" }, { "start_pos": 405, "end_pos": 407, "annotation": "n_glycosylation_sequon" }, { "start_pos": 410, "end_pos": 412, "annotation": "n_glycosylation_sequon" }, { "start_pos": 450, "end_pos": 452, "annotation": "n_glycosylation_sequon" }, { "start_pos": 473, "end_pos": 475, "annotation": "n_glycosylation_sequon" }, { "start_pos": 543, "end_pos": 545, "annotation": "n_glycosylation_sequon" }, { "start_pos": 563, "end_pos": 565, "annotation": "n_glycosylation_sequon" }, { "start_pos": 645, "end_pos": 647, "annotation": "n_glycosylation_sequon" }, { "start_pos": 90, "end_pos": 92, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "synthesized_glycans": [], "cluster_types": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] } ] }