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"description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "familial cancer of breast", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "familial cancer of the breast", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "hereditary breast cancer", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "hereditary breast carcinoma", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "breast cancer, familial", "description": "" }, { "id": "MONDO:0016419", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0016419", "name": "breast cancer, familial Male", "description": "" }, { "id": "MIM:114480", "resource": "MIM", "url": "https://www.omim.org/entry/114480", "name": "Breast cancer", "description": "Breast cancer" } ] } ] }, { "significant": "No", "trend": "down", "name": "Thyroid cancer [DO disease name]", "url": "http://disease-ontology.org/term/DOID:1781", "evidence": [ { "database": "BioXpress", "id": "Q8N0U7", "url": "https://hive.biochemistry.gwu.edu/bioxpress/transcriptview/Q8N0U7" } ], "disease": [ { "disease_id": "DOID:1781", "recommended_name": { "id": "DOID:1781", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:1781", "name": "thyroid cancer", "description": "An endocrine gland cancer located in the thryoid gland located in the neck below the thyroid cartilage." }, "synonyms": [ { "id": "DOID:1781", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:1781", "name": "thyroid gland cancer", "description": "" }, { "id": "DOID:1781", "resource": "Disease Ontology", 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"https://hive.biochemistry.gwu.edu/bioxpress/transcriptview/Q8N0U7" } ], "disease": [ { "disease_id": "DOID:263", "recommended_name": { "id": "DOID:263", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:263", "name": "kidney cancer", "description": "A urinary system cancer that is located_in the kidney." }, "synonyms": [ { "id": "DOID:263", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:263", "name": "malignant neoplasm of kidney except pelvis", "description": "" }, { "id": "DOID:263", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:263", "name": "malignant tumour of kidney", "description": "" }, { "id": "DOID:263", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:263", "name": "renal cancer", "description": "" } ] } ] }, { "significant": "No", "trend": "up", "name": "Liver cancer [DO disease name]", "url": "http://disease-ontology.org/term/DOID:3571", "evidence": [ { "database": "BioXpress", "id": "Q8N0U7", "url": "https://hive.biochemistry.gwu.edu/bioxpress/transcriptview/Q8N0U7" } ], "disease": [ { "disease_id": "DOID:3571", "recommended_name": { "id": "DOID:3571", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:3571", "name": "liver cancer", "description": "A hepatobiliary system cancer that is located_in the liver." }, "synonyms": [ { "id": "DOID:3571", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:3571", "name": "Ca liver - primary", "description": "" }, { "id": "DOID:3571", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:3571", "name": "Resectable malignant neoplasm of Liver", "description": "" }, { "id": "DOID:3571", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:3571", "name": "hepatic cancer", "description": "" }, { "id": "DOID:3571", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:3571", 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}, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumor of large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumor of the large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumor of the large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumour of large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumour of large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": 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"name": "Colorectal cancer", "description": "Colorectal cancer" } ] } ] } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8N0U7", "url": "https://www.uniprot.org/uniprot/Q8N0U7" } ], "common_name": "Human" } ], "gene": [ { "name": "C1orf87", "url": "https://www.uniprot.org/uniprot/Q8N0U7", "locus": { "chromosome": "1", "start_pos": 59987269, "end_pos": 60073770, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSG00000162598", "url": "https://www.ensembl.org/id/ENSG00000162598" } ] } } ], "crossref": [ { "id": "ENSG00000162598", "url": "https://bgee.org/?page=gene&gene_id=ENSG00000162598", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "Q8N0U7", "url": "https://hive.biochemistry.gwu.edu/biomuta/proteinview/Q8N0U7", "database": "BioMuta", "categories": [ "Variation" ] }, { "id": "C1orf87", "url": "http://www.genecards.org/cgi-bin/carddisp.pl?gene=C1orf87", "database": "GeneCards", "categories": [ "Organism-specific", "Gene Annotation" ] }, { "id": "127795", "url": "https://www.ncbi.nlm.nih.gov/gene/127795", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "28547", "url": "https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=28547", "database": "HGNC", "categories": [ "Organism-specific" ] }, { "id": "Q8N0U7", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q8N0U7*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR011992", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011992", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040774", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040774", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "hsa:127795", "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+hsa:127795", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "618860", "url": "http://www.omim.org/entry/618860", "database": "MIM", "categories": [ "Other" ] }, { "id": "NX_Q8N0U7", "url": "https://www.nextprot.org/entry/NX_Q8N0U7", "database": "neXtProt", "categories": [ "Organism-specific", "Protein" ] }, { "id": "Q8N0U7", "url": "https://oglcnac.org/atlas/detail/Q8N0U7", "database": "O-GlcNAc Atlas", "categories": [ "Glycoproteomics" ] }, { "id": "Q8N0U7", "url": "https://www.oglcnac.mcw.edu/search/?query_protein=Q8N0U7", "database": "O-GlcNAc Database", "categories": [ "Glycoproteomics" ] }, { "id": "YVHGIPR", "url": "https://omabrowser.org/oma/group/YVHGIPR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "4190314at2759", "url": "http://www.orthodb.org/?query=4190314at2759", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR34830", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34830", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34830:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34830:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF17743", "url": "http://pfam.xfam.org/family/PF17743", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "Q8N0U7", "url": "https://pharos.nih.gov/targets/Q8N0U7", "database": "PHAROS", "categories": [ "Organism-specific" ] }, { "id": "PR_Q8N0U7", "url": "http://purl.obolibrary.org/obo/PR_Q8N0U7", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_689590", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_689590", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "C9JPP7", "url": "https://www.uniprot.org/uniprot/C9JPP7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "C9JPP7-1", "url": "https://www.uniprot.org/uniprot/C9JPP7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q8N0U7", "url": "https://www.uniprot.org/uniprot/Q8N0U7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q8N0U7-1", "url": "https://www.uniprot.org/uniprot/Q8N0U7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q8N0U7-2", "url": "https://www.uniprot.org/uniprot/Q8N0U7-2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q8N0U7-3", "url": "https://www.uniprot.org/uniprot/Q8N0U7-3", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSAWKTPRGSDAMPEIMVKIIGSKHFQYLVEKPKIKENDSLKTETQTMHQKPMTDNARQMSRDTPVPINFTDQQTTDNPDDVKEKKHPENNQKSENNQKLLTGANSSRFLDGNIPSQANVHCSSVPTGDQSLSYVHGIPRRKLRDWSLEQMVRGSSDQPEDIGQSPSGTTNEDAFLLALVRRELKSRPLSSNLLEKLQKELKILDPISSGFLLQSQLSRLFLKHEVPLQLPTVKILCQRFSKRGSPEMVNYEKLLWFLNSAASDYPQQNKAAADLRKTESHGTHSQSTPPQHSSSQPEVNRSLLEILKMALRTTNGRLNIDNLNLSFRKEDRSFSGCLPLPKVRAICGKHGLYLTLSLLETLLNHQDLGYQNEIKWQNFVEMLTRASSDLLSDLPTGKNEKKAPAPPMEPEVPEMSQSKTEHMKTPEEELQPESSPAETSACKDPLKPLKIRPVSQPFVNPAVKNKAEECETWIDRFRKLENALYLCDLSNTGVLEKERARRLIHNYNLIYNLSLSPQKIDQALRRFRSGENMLLEPALRYLKEL", "length": 546, "header": "sp|Q8N0U7-1|CA087_HUMAN Isoform 1 of Uncharacterized protein C1orf87 OS=Homo sapiens OX=9606 GN=C1orf87 PE=2 SV=1 CANONICAL=Q8N0U7-1" }, "isoforms": [ { "isoform_ac": "C9JPP7-1", "url": "", "sequence": { "sequence": "MSSAWKTPRGSDAMPEIMVKIIGSKHFQYLVEKPKIKENDSLKTETQTMHQKPMTDNARQMSRDTPVPINFTDQQTTDNPDDVKEKKHPENNQKSENNQKLLTGANSSRFLDGNVRAICGKHGLYLTLSLLETLLNHQDLGYQNEIKWQNFVEMLTRASSDLLSDLPTGKNEKKAPAPPMEPEVPEMSQSKTEHMKTPEEELQPESSPAETSACKDPLKPLKIRPVSQPFVNPAVKNKAEECETWIDRFRKLENALYLCDLSNTGVLEKERARRLIHNYNLIYNLSLSPQKIDQALRRFRSGENMLLEPALRYLKEL", "length": 317, "header": "tr|C9JPP7-1|CA087_HUMAN Computationally mapped isoform of Uncharacterized protein C1orf87 OS=Homo sapiens OX=9606 GN=C1orf87 PE=2 SV=2 CANONICAL=Q8N0U7-1" }, "locus": { "chromosome": "1", "start_pos": 60072643, "end_pos": 59990676, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENST00000450089.6", "url": "https://www.ensembl.org/id/ENST00000450089.6" }, { "database": "Ensembl Peptide", "id": "ENSP00000389432.2", "url": "https://www.ensembl.org/id/ENSP00000389432.2" } ] } }, { "isoform_ac": "Q8N0U7-1", "url": "", "sequence": { "sequence": "MSSAWKTPRGSDAMPEIMVKIIGSKHFQYLVEKPKIKENDSLKTETQTMHQKPMTDNARQMSRDTPVPINFTDQQTTDNPDDVKEKKHPENNQKSENNQKLLTGANSSRFLDGNIPSQANVHCSSVPTGDQSLSYVHGIPRRKLRDWSLEQMVRGSSDQPEDIGQSPSGTTNEDAFLLALVRRELKSRPLSSNLLEKLQKELKILDPISSGFLLQSQLSRLFLKHEVPLQLPTVKILCQRFSKRGSPEMVNYEKLLWFLNSAASDYPQQNKAAADLRKTESHGTHSQSTPPQHSSSQPEVNRSLLEILKMALRTTNGRLNIDNLNLSFRKEDRSFSGCLPLPKVRAICGKHGLYLTLSLLETLLNHQDLGYQNEIKWQNFVEMLTRASSDLLSDLPTGKNEKKAPAPPMEPEVPEMSQSKTEHMKTPEEELQPESSPAETSACKDPLKPLKIRPVSQPFVNPAVKNKAEECETWIDRFRKLENALYLCDLSNTGVLEKERARRLIHNYNLIYNLSLSPQKIDQALRRFRSGENMLLEPALRYLKEL", "length": 546, "header": "sp|Q8N0U7-1|CA087_HUMAN Isoform 1 of Uncharacterized protein C1orf87 OS=Homo sapiens OX=9606 GN=C1orf87 PE=2 SV=1 CANONICAL=Q8N0U7-1" }, "locus": { "chromosome": "1", "start_pos": 60072643, "end_pos": 59990676, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENST00000371201.3", "url": "https://www.ensembl.org/id/ENST00000371201.3" }, { "database": "Ensembl Peptide", "id": "ENSP00000360244.3", "url": "https://www.ensembl.org/id/ENSP00000360244.3" } ] } }, { "isoform_ac": "Q8N0U7-2", "url": "", "sequence": { "sequence": "MSRGCSSDLRFHTWLGLRMLKNIIAVALLMLGKNEKKAPAPPMEPEVPEMSQSKTEHMKTPEEELQPESSPAETSACKDPLKPLKIRPVSQPFVNPAVKNKAEECETWIDRFRKLENALYLCDLSNTGVLEKERARRLIHNYNLIYNLSLSPQKIDQALRRFRSGENMLLEPALRYLKEL", "length": 180, "header": "sp|Q8N0U7-2|CA087_HUMAN Isoform 2 of Uncharacterized protein C1orf87 OS=Homo sapiens OX=9606 GN=C1orf87 PE=2 SV=1 CANONICAL=Q8N0U7-1" }, "locus": {} }, { "isoform_ac": "Q8N0U7-3", "url": "", "sequence": { "sequence": "MEPEVPEMSQSKTEHMKTPEEELQPESSPAETSACKDPLKPLKIRPVSQPFVNPAVKNKAEECETWIDRFRKLENALYLCDLSNTGVLEKERARRLIHNYNLIYNLSLSPQKIDQALRRFRSGENMLLEPALRYLKEL", "length": 138, "header": "sp|Q8N0U7-3|CA087_HUMAN Isoform 3 of Uncharacterized protein C1orf87 OS=Homo sapiens OX=9606 GN=C1orf87 PE=2 SV=1 CANONICAL=Q8N0U7-1" }, "locus": {} } ], "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "site_category": "reported_with_glycan", "site_seq": "T", "relation": "attached", "comment": "O-GlcNAcylation", "start_pos": 314, "start_aa": "Thr", "end_pos": 314, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr314", "evidence": [ { "id": "Q8N0U7", "database": "O-GlcNAc Database", "url": "https://www.oglcnac.mcw.edu/search/?query_protein=Q8N0U7" }, { "id": "30379171", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/30379171" }, { "id": "Q8N0U7", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/Q8N0U7" } ] } ], "phosphorylation": [ { "start_pos": 11, "end_pos": 11, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q8N0U7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8N0U7" }, { "database": "PubMed", "id": "20230923", "url": "https://glygen.org/publication/PubMed/20230923" } ], "site_lbl": "Ser11" }, { "start_pos": 7, "end_pos": 7, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q8N0U7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8N0U7" }, { "database": "PubMed", "id": "20230923", "url": "https://glygen.org/publication/PubMed/20230923" } ], "site_lbl": "Thr7" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_reported_with_glycan" ], "publication": [ { "title": "The consensus coding sequences of human breast and colorectal cancers.", "journal": "Science", "date": "2006", "authors": "Sjoblom T, Jones S, Wood LD, Parsons DW, Lin J, Barber TD, Mandelker D, Leary RJ, Ptak J, Silliman N, Szabo S, Buckhaults P, Farrell C, Meeh P, Markowitz SD, Willis J, Dawson D, Willson JK, Gazdar AF, Hartigan J, Wu L, Liu C, Parmigiani G, Park BH, Bachman KE, Papadopoulos N, Vogelstein B, Kinzler KW, Velculescu VE", "evidence": [ { "database": "UniProtKB", "id": "Q8N0U7", "url": "https://www.uniprot.org/uniprot/Q8N0U7" } ], "reference": [ { "type": "PubMed", "id": "16959974", "url": "https://glygen.org/publication/PubMed/16959974" } ] }, { "title": "Phosphoproteomic analysis of primary human multiple myeloma cells.", "journal": "Journal of proteomics", "date": "2010", "authors": "Ge F, Xiao CL, Yin XF, Lu CH, Zeng HL, He QY", "evidence": [ { "database": "iPTMnet", "id": "Q8N0U7-1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8N0U7-1" } ], "reference": [ { "type": "PubMed", "id": "20230923", "url": "https://glygen.org/publication/PubMed/20230923" } ] }, { "title": "A triarylphosphine-trimethylpiperidine reagent for the one-step derivatization and enrichment of protein post-translational modifications and identification by mass spectrometry.", "journal": "Chemical communications (Cambridge, England)", "date": "2018", "authors": "Huo B, Zhang W, Zhao X, Dong H, Yu Y, Wang J, Qian X, Qin W", "evidence": [ { "database": "O-GlcNAc Database", "id": "Q8N0U7", "url": "https://www.oglcnac.mcw.edu/search/?query_protein=Q8N0U7" }, { "database": "O-GlcNAc Atlas", "id": "Q8N0U7", "url": "https://oglcnac.org/atlas/detail/Q8N0U7" } ], "reference": [ { "type": "PubMed", "id": "30379171", "url": "https://glygen.org/publication/PubMed/30379171" } ] } ], "pathway": [ { "id": "hsa:127795", "name": "", "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+hsa:127795", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2KB50-1", "protein_name": "Predicted gene 12695", "gene_name": "C5h1orf87", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSPWKTPPSSAPKPEMIVKIIGSKHFRYFVEKPMIRQNETLKTEPQTPLPEPGTDYSRQVRRDLPGPTDSSEQQISAHPAEKEESGQKPESNQKFLTTVLGNRFLDDMISHGANVHCSSVPAGDQSLSYMHSLPRRKSIDWCLENTKDNSGQAVEVVRRPSVMTREDSFLIALVRRELNSCPLSSNLLDKLQKELKTLDPISSGFLHQSQLNRLFLRHKVPLPLPTLKLLCQRFSRRDSPEGVNYGELLCFLKEATKDNLQQNGTAVYSNPRKTPSLSQDKQSTPPQDSSLLSDVNKSLLQILKMALRTYQGKFSVDCLNLNFQKEDHSFSGCLPLPKIMSICSKHGLHITMTLLETLLHHQDLGYRGEIKWKNFVKWLNRASSDLQYDMPAGKNKKEVQENLVNIPEGTQRNTEYVKTSEKNLQPKTSTTSAPEGPVTAFKYRPASEPGEHRAMMKDEQPELWIDRFRKLENALYLCDLSNTGVLEWERAKRLIHNYNLIYKLSLSPRRIDQALRRFRSGENIILEPALQYLKEL", "length": 537 }, "evidence": [ { "id": "45240558", "url": "http://www.informatics.jax.org/homology/45240558", "database": "MGI" } ], "common_name": "Rat" }, { "uniprot_canonical_ac": "A2AGB2-1", "protein_name": "Uncharacterized protein C1orf87 homolog", "gene_name": "Gm12695", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSPWKTSQSSVPMPEMIVKIVGSKHFRYFIEKPMNKQNEKLKTEPQTSLQKPRNDYSRRVSRDLPGPTDSSEQQITANPAEKEESKHQRSSLKPESNQKFLTRVFSNRFLDGRISYEANVHCSSVPTGDQSLSYMHSLPRRKSVGWCLEHTAKDSSGQAEEIVQRPSVMTREDSFLTTLVRRELNSRPLSSNLLDKLQKELKTLDPISSGFLHQSQLSCLFLRHKVPLPLLTVKLLCQRFSRRCSPEMVNYGEVLCFLKEATKDNLQQNGTAGYSNSRKTSSPSYHKQSIPPQDSSLLSEVNKSLLEILKMALRPCQGKLSIDCLNMSFRKEDHSFSGCLPLPKVISICSKHGLYVTMTLLETLLHHQELGYRGEIKWKNFVKWLNRASADLSCDMPAGKNKKETQGDLVDIPERPQRKTEHVKTPEENLQTKNPTTMTSAPEDPVTFFKNRPVSQPVEHLAVKKDGQSELWIDRFRKLENALYLCDLSNTGVLERERARRLIHNYNLIYSLSLSPRRINQALQRYRSGENIILEPALQYLKEL", "length": 545 }, "evidence": [ { "id": "Q8N0U7", "url": "https://omabrowser.org/oma/group/Q8N0U7/", "database": "OMA" } ], "common_name": "Mouse" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 106, "end_pos": 108, "annotation": "n_glycosylation_sequon" }, { "start_pos": 301, "end_pos": 303, "annotation": "n_glycosylation_sequon" }, { "start_pos": 325, "end_pos": 327, "annotation": "n_glycosylation_sequon" }, { "start_pos": 39, "end_pos": 41, "annotation": "n_glycosylation_sequon" }, { "start_pos": 513, "end_pos": 515, "annotation": "n_glycosylation_sequon" }, { "start_pos": 70, "end_pos": 72, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "synthesized_glycans": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.mgi", "label": "MGI Homologs" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 1 }, { "field": "o_linked_glycan_sites", "count": 1 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 1 }, { "field": "o_linked_glycan_sites", "count": 1 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 16 }, { "field": "total_sites", "count": 14 } ], "sort_fields": [ "start_pos", "end_pos", "subjects_tested", "subjects_positive", "frequency", "sequence_org", "sequence_mut", "comment", "chr_id", "chr_pos", "ref_nt", "alt_nt", "minor_allelic_frequency", "site_lbl" ] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 } ], "sort_fields": [ "start_pos", "end_pos", "subjects_tested", "subjects_positive", "frequency", "sequence_org", "sequence_mut", "comment", "chr_id", "chr_pos", "ref_nt", "alt_nt", "minor_allelic_frequency", "site_lbl" ] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 13 }, { "field": "total_sites", "count": 11 } ], "sort_fields": [ "start_pos", "end_pos", "subjects_tested", "subjects_positive", "frequency", "sequence_org", "sequence_mut", "comment", "chr_id", "chr_pos", "ref_nt", "alt_nt", "minor_allelic_frequency", "site_lbl" ] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }