{ "uniprot_canonical_ac": "Q6PGF5-1", "uniprot_ac": "Q6PGF5", "uniprot_id": "Q6PGF5_MOUSE", "mass": { "chemical_mass": 145414.0, "monoisotopic_mass": 145414.0 }, "refseq": { "ac": "NP_919320", "name": "ribosome biogenesis protein BMS1 homolog", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_919320" }, "gene_names": [ { "name": "Bms1", "resource": "UniProtKB", "type": "recommended", "url": "https://www.uniprot.org/uniprot/Q6PGF5", "id": "Q6PGF5" }, { "name": "Bms1l; mKIAA0187", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_919320", "id": "NP_919320" }, { "name": "Bms1", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_919320", "id": "NP_919320" } ], "protein_names": [ { "name": "BMS1 homolog, ribosome assembly protein (Yeast)", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "Q6PGF5" }, { "name": "BMS1, ribosome biogenesis factor", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "Q6PGF5" }, { "name": "BMS1-like, ribosome assembly protein; BMS1 homolog, ribosome assembly protein", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_919320", "id": "NP_919320" }, { "name": "ribosome biogenesis protein BMS1 homolog", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_919320", "id": "NP_919320" } ], "function": [], "disease": [ { "disease_id": "DOID:0080661", "recommended_name": { "id": "DOID:0080661", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:0080661", "name": "nonsyndromic aplasia cutis congenita", "description": "A skin disease characterized by localized areas of missing skin that resemble ulcers or oopen wounds in new borns and that has_material_basis_in heterozygous mutation in the BMS1 gene on chromosome 10q11." }, "synonyms": [ { "id": "MONDO:0007145", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007145", "name": "aplasia cutis congenita", "description": "Aplasia cutis congenita (ACC) is a rare skin disorder characterized by localized absence of skin that is usually located on the scalp but can occur anywhere on the body including the face, trunk and extremities. ACC may occasionally be associated with other anomalies." }, { "id": "MONDO:0007145", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007145", "name": "aplasia cutis congenita", "description": "" }, { "id": "MONDO:0007145", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007145", "name": "aplasia cutis congenita (disease)", "description": "" }, { "id": "MONDO:0007145", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007145", "name": "aplasia cutis congenita recessive", "description": "" }, { "id": "MONDO:0007145", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007145", "name": "ACC", "description": "" }, { "id": "MONDO:0007145", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007145", "name": "aplasia cutis congenita nonsyndromic", "description": "" }, { "id": "MONDO:0007145", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007145", "name": "aplasia cutis congenita, nonsyndromic", "description": "" }, { "id": "MONDO:0007145", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007145", "name": "congenital defect of skull and scalp", "description": "" }, { "id": "MONDO:0007145", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007145", "name": "scalp defect congenital", "description": "" }, { "id": "MONDO:0007145", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007145", "name": "scalp defect, congenital", "description": "" }, { "id": "MIM:107600", "resource": "MIM", "url": "https://www.omim.org/entry/107600", "name": "Aplasia cutis congenita, non-syndromic", "description": "Aplasia cutis congenita, non-syndromic" } ], "evidence": [ { "id": "0080661", "database": "Alliance of Genome Resources", "url": "https://www.alliancegenome.org/disease/DOID:0080661" } ] } ], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q6PGF5", "url": "https://www.uniprot.org/uniprot/Q6PGF5" } ], "common_name": "Mouse" } ], "gene": [ { "name": "Bms1", "url": "https://www.uniprot.org/uniprot/Q6PGF5", "locus": { "chromosome": "6", "start_pos": 118360342, "end_pos": 118396435, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSMUSG00000030138", "url": "https://www.ensembl.org/id/ENSMUSG00000030138" } ] } } ], "crossref": [ { "id": "ENSMUSG00000030138", "url": "https://bgee.org/?page=gene&gene_id=ENSMUSG00000030138", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd01882", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01882", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "213895", "url": "https://www.ncbi.nlm.nih.gov/gene/213895", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007034", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007034", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012948", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012948", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR030387", "url": "https://www.ebi.ac.uk/interpro/entry/IPR030387", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037875", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037875", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039761", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039761", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "mmu:213895", "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+mmu:213895", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "2446132", "url": "http://www.informatics.jax.org/marker/MGI:2446132", "database": "MGI", "categories": [ "Organism-specific" ] }, { "id": "Q6PGF5", "url": "https://www.oglcnac.mcw.edu/search/?query_protein=Q6PGF5", "database": "O-GlcNAc Database", "categories": [ "Glycoproteomics" ] }, { "id": "KLHVPMV", "url": "https://omabrowser.org/oma/group/KLHVPMV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "5478101at2759", "url": "http://www.orthodb.org/?query=5478101at2759", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12858", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12858", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12858:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12858:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04950", "url": "http://pfam.xfam.org/family/PF04950", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "PF08142", "url": "http://pfam.xfam.org/family/PF08142", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "R-MMU-6791226", "url": "https://www.reactome.org/PathwayBrowser/#R-MMU-6791226", "database": "Reactome", "categories": [ "Protein Classification" ] }, { "id": "NP_919320", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_919320", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "Q6PGF5", "url": "https://www.uniprot.org/uniprot/Q6PGF5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q6PGF5-1", "url": "https://www.uniprot.org/uniprot/Q6PGF5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "METKDHKKHRKKHSGPKAEKKKKRHLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRTQDLKTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIRCLIRNFTRQKLSEIRGPVTIVSGKKRRLTIIECGCDINVMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIMGVLTHLDSFKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFITVMKFRPLTWQTSHPYILADRMEDLTNPEAIRTNVKCDRKVSLYGYLRGAYLKNNSQIHMPGVGDFVASDVSFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDLGGSHGFQAAEETGPTHELVQSLISTHASIDAKMASSRVTLFSDSKPLGSEDIDNQGLWMPKEEKQVDVETGRVRRKAIFGDTEDESGDEESEDEEDMSEADGMEPGSSDDEAEEAEEEGAESSSGNYMMGRGRKRPKLEEQEEDSEADSPAFADSDDDLERSSGGEEEAEEADESSADGASTGERDAGECGSVGEASEESPSAAHQWRPHADAQKPSPVRKAALTTSDSGHCTAEEAFPSEDESEDSELSAEEEDSDHREVRGKLAHPLRDSGQKPASESLVDETSDIESLLKEEEEYKEDNSSSVETSGALKWKEDLSRKAAEAFLRQQQAAPNLRKLIYGTVTEDNEDEDGDPAEELGGLFHVSQPDRGCKHKADSLDCSRFPVEAPHDWDLEEVMNSIRDCFVTGKWEDDKDAAKILAEEEELYGDFEDLETGDVHKGKPGPDTQSEDIEEEEVKEETDPSEEESARKKHLDKKRKLKELFDAEYDEGESTYFDDLKGEMQRQAQLNQAEFEDQEDETRVQYEGFRPGMYVRIEIENIPCEFVQNFDPHYPIILGGLGNSEGTVGYVQMRIKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGATFWGPITPQGTGFLAIQSVSGVMPEFRIAATGVVLDLDKSIKIVKKLKLTGFPFKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRAPEGAFRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTHQLRLAHGIKLKANKDSLYKPILRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGKVPRDRQRPAVIREPHERKVLALLDALSTIHSQKMKKAKEQRRLHNKEHVKMKQKEEEDKLRRQKDLRKKLFRMQGQKEKRSQKSSLRGAEDT", "length": 1284, "header": "tr|Q6PGF5-1|Q6PGF5_MOUSE Isoform 1 of BMS1 homolog, ribosome assembly protein (Yeast) OS=Mus musculus OX=10090 GN=Bms1 PE=1 SV=1 CANONICAL=Q6PGF5-1" }, "isoforms": [ { "isoform_ac": "Q6PGF5-1", "url": "", "sequence": { "sequence": "METKDHKKHRKKHSGPKAEKKKKRHLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRTQDLKTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIRCLIRNFTRQKLSEIRGPVTIVSGKKRRLTIIECGCDINVMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIMGVLTHLDSFKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFITVMKFRPLTWQTSHPYILADRMEDLTNPEAIRTNVKCDRKVSLYGYLRGAYLKNNSQIHMPGVGDFVASDVSFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDLGGSHGFQAAEETGPTHELVQSLISTHASIDAKMASSRVTLFSDSKPLGSEDIDNQGLWMPKEEKQVDVETGRVRRKAIFGDTEDESGDEESEDEEDMSEADGMEPGSSDDEAEEAEEEGAESSSGNYMMGRGRKRPKLEEQEEDSEADSPAFADSDDDLERSSGGEEEAEEADESSADGASTGERDAGECGSVGEASEESPSAAHQWRPHADAQKPSPVRKAALTTSDSGHCTAEEAFPSEDESEDSELSAEEEDSDHREVRGKLAHPLRDSGQKPASESLVDETSDIESLLKEEEEYKEDNSSSVETSGALKWKEDLSRKAAEAFLRQQQAAPNLRKLIYGTVTEDNEDEDGDPAEELGGLFHVSQPDRGCKHKADSLDCSRFPVEAPHDWDLEEVMNSIRDCFVTGKWEDDKDAAKILAEEEELYGDFEDLETGDVHKGKPGPDTQSEDIEEEEVKEETDPSEEESARKKHLDKKRKLKELFDAEYDEGESTYFDDLKGEMQRQAQLNQAEFEDQEDETRVQYEGFRPGMYVRIEIENIPCEFVQNFDPHYPIILGGLGNSEGTVGYVQMRIKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGATFWGPITPQGTGFLAIQSVSGVMPEFRIAATGVVLDLDKSIKIVKKLKLTGFPFKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRAPEGAFRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTHQLRLAHGIKLKANKDSLYKPILRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGKVPRDRQRPAVIREPHERKVLALLDALSTIHSQKMKKAKEQRRLHNKEHVKMKQKEEEDKLRRQKDLRKKLFRMQGQKEKRSQKSSLRGAEDT", "length": 1284, "header": "tr|Q6PGF5-1|Q6PGF5_MOUSE Isoform 1 of BMS1 homolog, ribosome assembly protein (Yeast) OS=Mus musculus OX=10090 GN=Bms1 PE=1 SV=1 CANONICAL=Q6PGF5-1" }, "locus": { "chromosome": "6", "start_pos": 118395545, "end_pos": 118360615, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSMUST00000032237.8", "url": "https://www.ensembl.org/id/ENSMUST00000032237.8" }, { "database": "Ensembl Peptide", "id": "ENSMUSP00000032237.7", "url": "https://www.ensembl.org/id/ENSMUSP00000032237.7" } ] } } ], "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "site_category": "reported_with_glycan", "site_seq": "", "relation": "attached", "comment": "O-GlcNAcylation", "evidence": [ { "id": "Q6PGF5", "database": "O-GlcNAc Database", "url": "https://www.oglcnac.mcw.edu/search/?query_protein=Q6PGF5" }, { "id": "34887587", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/34887587" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_reported_with_glycan" ], "publication": [ { "title": "Dynamic eIF3a O-GlcNAcylation controls translation reinitiation during nutrient stress.", "journal": "Nature chemical biology", "date": "2022", "authors": "Shu XE, Mao Y, Jia L, Qian SB", "evidence": [ { "database": "O-GlcNAc Database", "id": "Q6PGF5", "url": "https://www.oglcnac.mcw.edu/search/?query_protein=Q6PGF5" } ], "reference": [ { "type": "PubMed", "id": "34887587", "url": "https://glygen.org/publication/PubMed/34887587" } ] } ], "pathway": [ { "id": "mmu:213895", "name": "", "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+mmu:213895", "resource": "KEGG Pathway" }, { "id": "R-MMU-6791226", "name": "Major pathway of rRNA processing in the nucleolus and cytosol", "url": "https://www.reactome.org/PathwayBrowser/#R-MMU-6791226", "resource": "Reactome", "description": "Major pathway of rRNA processing in the nucleolus and cytosol" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A096MJ94-1", "protein_name": "BMS1 ribosome biogenesis factor", "gene_name": "Bms1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEATDHKKHRKKHSGPKAEKKKKRHLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRTQDLKTKRHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIRCLIRNFTRQKLSEIRGPVTIVSGKKRRLTIIECGCDINVMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIMGVLTHLDSFKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFITVMKFRPLTWQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGAYLKTNSQIHMPGVGDFVASDVSFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDLGGSHGFQTVEEAGPTHELVQSLISTHASIDAKMASSRVTLFSDSRPLGSEDVDSQGLWMPKEEKQVDVETGRVRRKAVFGDTEEESGDDDSEGDEDEMSDDDGMENGSSDDEVEEEEGAKSSSCKYTTVRGHKRPKLEEQEEDSEADLPAFADSDDDLERSSGGEEEAEEADESSADGASTGERDTGEASSVGGARGARPPAAHQWGPHPDGQKPSPVRKAALTTSDSGHCTAEEAFPSEDESEESELSSEEEDSEHKEVGGTNPQQHRGQKPESENVGDETSDIENLLKEEEDHKEENSSSVETSGALKWKEDLSRKAAEAFLRQQQAAPNLRKLIYGTVTEDNEDEDGDASEELGGLFRVSQPDKGCKHKADSLDCSRFHVEAPHDWDLEEVMNSIRDCFVTGKWEDDKDAAKLLAEDEELYGDFEDLETGDVHKGKPGLDTQSEDIEEEEEVKEETGPAEEESAREKHLNKKRKLKELFDAEYDEGESTYFDDLKGEMQRQAQLNQAEFEDQDDETRVQYEGFRPGMYVRIEIENIPCEFVQNFDPHYPIILGGLGNSEGTVGYVQMRLKKHRWYKKILKSRDPVIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGATFWGPITPQGTGFLAIQSVSGAMPEFRIAATGVVLDLDKSIKIVKKLKLTGFPFKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRAPEGAFRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTHQLRLAHGIKLKPNKDSLYKPILRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGKVPRDRQRPAVIREPHERKVLALLDALSTIHGQKMKKAKEQRHLHNKEHVKMKQKEEEEKLRRQKDLRKKLFRIQGQKEKRSQKSSLRGAEAT", "length": 1282 }, "evidence": [ { "id": "45228289", "url": "http://www.informatics.jax.org/homology/45228289", "database": "MGI" } ], "common_name": "Rat" }, { "uniprot_canonical_ac": "Q14692-1", "protein_name": "Ribosome biogenesis protein BMS1 homolog", "gene_name": "BMS1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEAKDQKKHRKKNSGPKAAKKKKRLLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRTQDLKTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPVTIVSGKKRRLTIIECGCDINMMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIMGVLTHLDSFKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFITVMKFRPLTWQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGAHLKNKSQIHMPGVGDFAVSDISFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDLGGSHVFQDEVGPTHELVQSLISTHSTIDAKMASSRVTLFSDSKPLGSEDIDNQGLMMPKEEKQMDLNTGRMRRKAIFGDEDESGDSDDEEDDEMSEDDGLENGSSDEEAEEEENAEMTDQYMAVKGIKRRKLELEEDSEMDLPAFADSDDDLERSSAEEGEAEEADESSEEEDCTAGEKGISGSKAAGEGSKAGLSPANCQSDRVNLEKSLLMKKAALPTFDSGHCTAEEVFASEDESEESSSLSAEEEDSENEEAIRKKLSKPSQVSSGQKLGPQNFIDETSDIENLLKEEEDYKEENNDSKETSGALKWKEDLSRKAAEAFLRQQQAAPNLRKLIYGTVTEDNEEEDDDTLEELGGLFRVNQPDRECKHKADSLDCSRFLVEAPHDWDLEEVMNSIRDCFVTGKWEDDKDAAKVLAEDEELYGDFEDLETGDVHKGKSGPNTQNEDIEKEVKEEIDPDEEESAKKKHLDKKRKLKEMFDAEYDEGESTYFDDLKGEMQKQAQLNRAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEFVQNFDPHYPIILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGAAFWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDKSIKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRAPEGAFRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLAHGVRLKANKDSLYKPILRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGKVPKDRRRPAVIREPHERKILALLDALSTVHSQKMKKAKEQRHLHNKEHFRAKQKEEEEKLKRQKDLRKKLFRIQGQKERRNQKSSLKGAEGQLQ", "length": 1282 }, "evidence": [ { "id": "45228289", "url": "http://www.informatics.jax.org/homology/45228289", "database": "MGI" } ], "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "GTPase activity", "id": "GO:0003924", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003924", "evidence": [ { "database": "UniProtKB", "id": "Q6PGF5", "url": "https://www.uniprot.org/uniprot/Q6PGF5" } ], "pmid": "" }, { "name": "GTP binding", "id": "GO:0005525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005525", "evidence": [ { "database": "UniProtKB", "id": "Q6PGF5", "url": "https://www.uniprot.org/uniprot/Q6PGF5" } ], "pmid": "" }, { "name": "U3 snoRNA binding", "id": "GO:0034511", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034511", "evidence": [ { "database": "UniProtKB", "id": "Q6PGF5", "url": "https://www.uniprot.org/uniprot/Q6PGF5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "Q6PGF5", "url": "https://www.uniprot.org/uniprot/Q6PGF5" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "Q6PGF5", "url": "https://www.uniprot.org/uniprot/Q6PGF5" } ], "pmid": "" }, { "name": "chromosome", "id": "GO:0005694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005694", "evidence": [ { "database": "UniProtKB", "id": "Q6PGF5", "url": "https://www.uniprot.org/uniprot/Q6PGF5" } ], "pmid": "" }, { "name": "90S preribosome", "id": "GO:0030686", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030686", "evidence": [ { "database": "UniProtKB", "id": "Q6PGF5", "url": "https://www.uniprot.org/uniprot/Q6PGF5" } ], "pmid": "" }, { "name": "small-subunit processome", "id": "GO:0032040", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032040", "evidence": [ { "database": "UniProtKB", "id": "Q6PGF5", "url": "https://www.uniprot.org/uniprot/Q6PGF5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)", "id": "GO:0000462", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000462", "evidence": [ { "database": "UniProtKB", "id": "Q6PGF5", "url": "https://www.uniprot.org/uniprot/Q6PGF5" } ], "pmid": "" }, { "name": "endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)", "id": "GO:0000479", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000479", "evidence": [ { "database": "UniProtKB", "id": "Q6PGF5", "url": "https://www.uniprot.org/uniprot/Q6PGF5" } ], "pmid": "" }, { "name": "ribosomal small subunit biogenesis", "id": "GO:0042274", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042274", "evidence": [ { "database": "UniProtKB", "id": "Q6PGF5", "url": "https://www.uniprot.org/uniprot/Q6PGF5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1043, "end_pos": 1045, "annotation": "n_glycosylation_sequon" }, { "start_pos": 105, "end_pos": 107, "annotation": "n_glycosylation_sequon" }, { "start_pos": 293, "end_pos": 295, "annotation": "n_glycosylation_sequon" }, { "start_pos": 658, "end_pos": 660, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "synthesized_glycans": [], "cluster_types": [ { "name": "homologset.mgi", "label": "MGI Homologs" } ], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 1 }, { "field": "o_linked_glycan_sites", "count": 1 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 1 }, { "field": "o_linked_glycan_sites", "count": 1 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment" ] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }